RNA–Protein interactions for RNA: YLL035W

GRC3, Transcript of Polynucleotide kinase present on rDNA, yeast

Gene GRC3, Length 1,899 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GRC3	YLL035W	BRR1	Q99177	341 aa	Predicted RBP	4.87	□□□□□ -1.63
GRC3	YLL035W	MAK16	P10962	306 aa	Predicted RBP	4.86	□□□□□ -1.63
GRC3	YLL035W	SSB1	P11484	613 aa	Known RBP	4.86	□□□□□ -1.63
GRC3	YLL035W	ATE1	P16639	503 aa		4.86	□□□□□ -1.63
GRC3	YLL035W	CLB4	P24871	460 aa		4.86	□□□□□ -1.63
GRC3	YLL035W	PUP1	P25043	261 aa		4.86	□□□□□ -1.63
GRC3	YLL035W	SWC3	P31376	625 aa		4.86	□□□□□ -1.63
GRC3	YLL035W	TFC3	P34111	1160 aa		4.86	□□□□□ -1.63
GRC3	YLL035W	MUD2	P36084	527 aa	Known RBP	4.86	□□□□□ -1.63
GRC3	YLL035W	SSB2	P40150	613 aa	Known RBP	4.86	□□□□□ -1.63
GRC3	YLL035W	ILM1	P47155	203 aa		4.86	□□□□□ -1.63
GRC3	YLL035W	SVF1	Q05515	481 aa		4.86	□□□□□ -1.63
GRC3	YLL035W	MAG2	Q06436	670 aa	Known RBP	4.86	□□□□□ -1.63
GRC3	YLL035W	SUI3	P09064	285 aa	Known RBP	4.86	□□□□□ -1.63
GRC3	YLL035W	PMR1	P13586	950 aa		4.86	□□□□□ -1.63
GRC3	YLL035W	BIO2	P32451	375 aa		4.86	□□□□□ -1.63
GRC3	YLL035W	SEC6	P32844	805 aa		4.86	□□□□□ -1.63
GRC3	YLL035W	YLF2	P38746	405 aa		4.86	□□□□□ -1.63
GRC3	YLL035W	SAP155	P43612	1002 aa		4.86	□□□□□ -1.63
GRC3	YLL035W	SET2	P46995	733 aa	Known RBP	4.86	□□□□□ -1.63
GRC3	YLL035W	GYP7	P48365	746 aa		4.86	□□□□□ -1.63
GRC3	YLL035W	DSL1	P53847	754 aa		4.86	□□□□□ -1.63
GRC3	YLL035W	PKH1	Q03407	766 aa		4.86	□□□□□ -1.63
GRC3	YLL035W	GIR2	Q03768	265 aa	Predicted RBP	4.86	□□□□□ -1.63
GRC3	YLL035W	EIS1	Q05050	843 aa	Known RBP	4.86	□□□□□ -1.63
GRC3	YLL035W	YLR326W	Q06170	240 aa	Known RBP	4.86	□□□□□ -1.63
GRC3	YLL035W	MMR1	Q06324	491 aa		4.86	□□□□□ -1.63
GRC3	YLL035W	LYS2	P07702	1392 aa		4.85	□□□□□ -1.63
GRC3	YLL035W	COX6	P00427	148 aa		4.85	□□□□□ -1.63
GRC3	YLL035W	PRT1	P06103	763 aa	Known RBP	4.85	□□□□□ -1.63
GRC3	YLL035W	CIT2	P08679	460 aa		4.85	□□□□□ -1.63
GRC3	YLL035W	NAT1	P12945	854 aa	Known RBP	4.85	□□□□□ -1.63
GRC3	YLL035W	HIR2	P32480	875 aa		4.85	□□□□□ -1.63
GRC3	YLL035W	RTG2	P32608	588 aa	Known RBP	4.85	□□□□□ -1.63
GRC3	YLL035W	PTH2	P34222	208 aa		4.85	□□□□□ -1.63
GRC3	YLL035W	ECM4	P36156	370 aa		4.85	□□□□□ -1.63
GRC3	YLL035W	YSW1	P38280	609 aa		4.85	□□□□□ -1.63
GRC3	YLL035W	EFM2	P38347	419 aa		4.85	□□□□□ -1.63
GRC3	YLL035W	BOI2	P39969	1040 aa		4.85	□□□□□ -1.63
GRC3	YLL035W	CTH1	P47976	325 aa		4.85	□□□□□ -1.63
GRC3	YLL035W	BNI4	P53858	892 aa		4.85	□□□□□ -1.63
GRC3	YLL035W	GCR2	Q01722	534 aa		4.85	□□□□□ -1.63
GRC3	YLL035W	HEH2	Q03281	663 aa		4.85	□□□□□ -1.63
GRC3	YLL035W	CEF1	Q03654	590 aa	Predicted RBP	4.85	□□□□□ -1.63
GRC3	YLL035W	ERB1	Q04660	807 aa	Known RBP	4.85	□□□□□ -1.63
GRC3	YLL035W	STE23	Q06010	1027 aa		4.85	□□□□□ -1.63
GRC3	YLL035W	DNL4	Q08387	944 aa	Predicted RBP	4.85	□□□□□ -1.63
GRC3	YLL035W	YRF1-4	O13559	1382 aa		4.84	□□□□□ -1.63
GRC3	YLL035W	TRL1	P09880	827 aa	Known RBP	4.84	□□□□□ -1.63
GRC3	YLL035W	TUP1	P16649	713 aa		4.84	□□□□□ -1.63
GRC3	YLL035W	VMA4	P22203	233 aa	Known RBP	4.84	□□□□□ -1.63
GRC3	YLL035W	RPN2	P32565	945 aa	Known RBP	4.84	□□□□□ -1.63
GRC3	YLL035W	PET112	P33893	541 aa		4.84	□□□□□ -1.63
GRC3	YLL035W	VPS35	P34110	944 aa		4.84	□□□□□ -1.63
GRC3	YLL035W	OSH3	P38713	996 aa	Known RBP	4.84	□□□□□ -1.63
GRC3	YLL035W	ILV3	P39522	585 aa	Known RBP	4.84	□□□□□ -1.63
GRC3	YLL035W	ERP2	P39704	215 aa		4.84	□□□□□ -1.63
GRC3	YLL035W	GCN20	P43535	752 aa	Known RBP	4.84	□□□□□ -1.63
GRC3	YLL035W	ALG12	P53730	551 aa		4.84	□□□□□ -1.63
GRC3	YLL035W	NCS2	P53923	493 aa	Predicted RBP	4.84	□□□□□ -1.63
GRC3	YLL035W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	4.84	□□□□□ -1.63	not detected
GRC3	YLL035W	YDR090C	Q03193	310 aa		4.84	□□□□□ -1.63
GRC3	YLL035W	FAR8	Q05040	523 aa		4.84	□□□□□ -1.63
GRC3	YLL035W	DPL1	Q05567	589 aa		4.84	□□□□□ -1.63
GRC3	YLL035W	YLR257W	Q06146	321 aa	Known RBP	4.84	□□□□□ -1.63
GRC3	YLL035W	SPN1	Q06505	410 aa	Predicted RBP	4.84	□□□□□ -1.63
GRC3	YLL035W	RIX7	Q07844	837 aa	Known RBP	4.84	□□□□□ -1.63
GRC3	YLL035W	MET7	Q08645	548 aa		4.84	□□□□□ -1.63
GRC3	YLL035W	MSC6	Q08818	692 aa	Known RBP	4.84	□□□□□ -1.63
GRC3	YLL035W	TRK1	P12685	1235 aa		4.83	□□□□□ -1.64
GRC3	YLL035W	PDB1	P32473	366 aa	Known RBP	4.83	□□□□□ -1.64
GRC3	YLL035W	YKR018C	P36114	725 aa		4.83	□□□□□ -1.64
GRC3	YLL035W	LIN1	P38852	340 aa	Predicted RBP	4.83	□□□□□ -1.64
GRC3	YLL035W	MSN5	P52918	1224 aa		4.83	□□□□□ -1.64
GRC3	YLL035W	RIA1	P53893	1110 aa		4.83	□□□□□ -1.64
GRC3	YLL035W	BET4	Q00618	327 aa		4.83	□□□□□ -1.64
GRC3	YLL035W	VTC3	Q02725	835 aa		4.83	□□□□□ -1.64
GRC3	YLL035W	SRC1	Q03707	834 aa		4.83	□□□□□ -1.64
GRC3	YLL035W	RUD3	Q12234	484 aa	Known RBP	4.83	□□□□□ -1.64
GRC3	YLL035W	WHI5	Q12416	295 aa		4.83	□□□□□ -1.64
GRC3	YLL035W	SWI1	P09547	1314 aa		4.83	□□□□□ -1.64
GRC3	YLL035W	GCD2	P12754	651 aa	Predicted RBP	4.83	□□□□□ -1.64
GRC3	YLL035W	SEC23	P15303	768 aa	Known RBP	4.83	□□□□□ -1.64
GRC3	YLL035W	SPE2	P21182	396 aa		4.83	□□□□□ -1.64
GRC3	YLL035W	DAL7	P21826	554 aa		4.83	□□□□□ -1.64
GRC3	YLL035W	HSM3	P38348	480 aa		4.83	□□□□□ -1.64
GRC3	YLL035W	PRE3	P38624	215 aa		4.83	□□□□□ -1.64
GRC3	YLL035W	VPS8	P39702	1274 aa		4.83	□□□□□ -1.64
GRC3	YLL035W	NUP60	P39705	539 aa		4.83	□□□□□ -1.64
GRC3	YLL035W	SPC72	P39723	622 aa		4.83	□□□□□ -1.64
GRC3	YLL035W	CCT5	P40413	562 aa	Known RBP	4.83	□□□□□ -1.64
GRC3	YLL035W	SYG1	P40528	902 aa		4.83	□□□□□ -1.64
GRC3	YLL035W	VPS53	P47061	822 aa		4.83	□□□□□ -1.64
GRC3	YLL035W	HOS2	P53096	452 aa	Predicted RBP	4.83	□□□□□ -1.64
GRC3	YLL035W	SEC5	P89102	971 aa		4.83	□□□□□ -1.64
GRC3	YLL035W	MFM1	Q02783	413 aa		4.83	□□□□□ -1.64
GRC3	YLL035W	YML108W	Q03759	105 aa		4.83	□□□□□ -1.64
GRC3	YLL035W	RBA50	Q04418	439 aa		4.83	□□□□□ -1.64
GRC3	YLL035W	YKU80	Q04437	629 aa		4.83	□□□□□ -1.64
GRC3	YLL035W	YMR111C	Q04461	462 aa	Predicted RBP	4.83	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 11.7 ms