RNA–Protein interactions for RNA: YJL140W

RPB4, Transcript of RNA polymerase II subunit B32, yeastyeast

Gene RPB4, Length 666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPB4YJL140W PRP40P33203 583 aaKnown RBP6.93□□□□□ -1.3
RPB4YJL140W YBR197CP38306 217 aa6.93□□□□□ -1.3
RPB4YJL140W DYS1P38791 387 aa6.93□□□□□ -1.3
RPB4YJL140W QDR2P40474 542 aa6.93□□□□□ -1.3
RPB4YJL140W SBE2P42223 864 aaKnown RBP6.93□□□□□ -1.3
RPB4YJL140W FOX2Q02207 900 aaKnown RBP6.93□□□□□ -1.3
RPB4YJL140W CUS1Q02554 436 aaPredicted RBP6.93□□□□□ -1.3
RPB4YJL140W CWC15Q03772 175 aaKnown RBP6.93□□□□□ -1.3
RPB4YJL140W NPR2P39923 615 aa6.92□□□□□ -1.3
RPB4YJL140W LYS4P49367 693 aaPredicted RBP6.92□□□□□ -1.3
RPB4YJL140W YML083CQ04526 418 aa6.92□□□□□ -1.3
RPB4YJL140W FKS3Q04952 1785 aa6.92□□□□□ -1.3
RPB4YJL140W YEF3P16521 1044 aaKnown RBP6.91□□□□□ -1.3
RPB4YJL140W YNR014WP53719 212 aa6.91□□□□□ -1.3
RPB4YJL140W TDA6Q06466 467 aa6.91□□□□□ -1.3
RPB4YJL140W SUB2Q07478 446 aaKnown RBP6.91□□□□□ -1.3
RPB4YJL140W VMA3P25515 160 aa6.9□□□□□ -1.3
RPB4YJL140W LDH1P38139 375 aa6.9□□□□□ -1.3
RPB4YJL140W ENP1P38333 483 aaKnown RBP6.9□□□□□ -1.3
RPB4YJL140W YPR053CQ6Q5F3 151 aa6.9□□□□□ -1.3
RPB4YJL140W YMR187CQ03236 431 aa6.89□□□□□ -1.31
RPB4YJL140W ISC10P32645 267 aa6.88□□□□□ -1.31
RPB4YJL140W RRN6P32786 894 aa6.88□□□□□ -1.31
RPB4YJL140W YKL133CP36066 463 aa6.88□□□□□ -1.31
RPB4YJL140W MCX1P38323 520 aaPredicted RBP6.88□□□□□ -1.31
RPB4YJL140W YBR287WP38355 427 aa6.88□□□□□ -1.31
RPB4YJL140W BOI2P39969 1040 aa6.88□□□□□ -1.31
RPB4YJL140W YOR296WQ08748 1289 aa6.88□□□□□ -1.31
RPB4YJL140W SLM3Q12093 417 aa6.88□□□□□ -1.31
RPB4YJL140W SPE2P21182 396 aa6.87□□□□□ -1.31
RPB4YJL140W CCT8P47079 568 aaKnown RBP6.87□□□□□ -1.31
RPB4YJL140W PNP1Q05788 311 aa6.87□□□□□ -1.31
RPB4YJL140W COBP00163 385 aa6.86□□□□□ -1.31
RPB4YJL140W GIP1P38229 639 aa6.86□□□□□ -1.31
RPB4YJL140W PRK1P40494 810 aa6.86□□□□□ -1.31
RPB4YJL140W YNR040WP53736 256 aa6.86□□□□□ -1.31
RPB4YJL140W ISW1P38144 1129 aa6.85□□□□□ -1.31
RPB4YJL140W SKN7P38889 622 aa6.85□□□□□ -1.31
RPB4YJL140W YER156CP40093 338 aaKnown RBP6.85□□□□□ -1.31
RPB4YJL140W MTR4P47047 1073 aaKnown RBP6.85□□□□□ -1.31
RPB4YJL140W CTH1P47976 325 aa6.85□□□□□ -1.31
RPB4YJL140W YRF1-4O13559 1382 aa6.84□□□□□ -1.31
RPB4YJL140W LEU2P04173 364 aaPredicted RBP6.84□□□□□ -1.31
RPB4YJL140W RPS24AP0CX31 135 aaKnown RBP6.84□□□□□ -1.31
RPB4YJL140W RPS24BP0CX32 135 aaKnown RBP6.84□□□□□ -1.31
RPB4YJL140W XKS1P42826 600 aa6.84□□□□□ -1.31
RPB4YJL140W KIP3P53086 805 aaKnown RBP6.84□□□□□ -1.31
RPB4YJL140W YKR075CP36155 307 aa6.83□□□□□ -1.32
RPB4YJL140W POL5P39985 1022 aaKnown RBP6.83□□□□□ -1.32
RPB4YJL140W ITC1P53125 1264 aa6.83□□□□□ -1.32
RPB4YJL140W PRP43P53131 767 aaKnown RBP6.83□□□□□ -1.32
RPB4YJL140W NHA1Q99271 985 aa6.83□□□□□ -1.32
RPB4YJL140W YRF1-3P0CX14 1859 aa6.83□□□□□ -1.32
RPB4YJL140W YRF1-7P0CX15 1859 aa6.83□□□□□ -1.32
RPB4YJL140W YRF1-6P53819 1859 aa6.83□□□□□ -1.32
RPB4YJL140W FIR1P40020 876 aa6.82□□□□□ -1.32
RPB4YJL140W RPL34AP87262 121 aaPredicted RBP6.82□□□□□ -1.32
RPB4YJL140W RSC2Q06488 889 aa6.82□□□□□ -1.32
RPB4YJL140W SPT7P35177 1332 aa6.81□□□□□ -1.32
RPB4YJL140W FUR4P05316 633 aaKnown RBP6.81□□□□□ -1.32
RPB4YJL140W IDI1P15496 288 aa6.81□□□□□ -1.32
RPB4YJL140W ALG14P38242 237 aa6.81□□□□□ -1.32
RPB4YJL140W LSO1Q3E827 93 aa6.81□□□□□ -1.32
RPB4YJL140W APC1P53886 1748 aa6.81□□□□□ -1.32
RPB4YJL140W MSN1P22148 382 aa6.8□□□□□ -1.32
RPB4YJL140W PGM2P37012 569 aaKnown RBP6.8□□□□□ -1.32
RPB4YJL140W BSD2P38356 321 aa6.8□□□□□ -1.32
RPB4YJL140W CHZ1P40019 153 aaPredicted RBP6.8□□□□□ -1.32
RPB4YJL140W HXT8P40886 569 aa6.8□□□□□ -1.32
RPB4YJL140W APC11Q12157 165 aa6.8□□□□□ -1.32
RPB4YJL140W SBP1P10080 294 aaKnown RBP6.79□□□□□ -1.32
RPB4YJL140W NAB2P32505 525 aaKnown RBP RIP-Chip data6.79□□□□□ -1.32 RIP-Chip
RPB4YJL140W TPS3P38426 1054 aaKnown RBP6.79□□□□□ -1.32
RPB4YJL140W ALD3P54114 506 aa6.79□□□□□ -1.32
RPB4YJL140W ORC1P54784 914 aaPredicted RBP6.79□□□□□ -1.32
RPB4YJL140W GIS4Q04233 774 aa6.79□□□□□ -1.32
RPB4YJL140W YLR419WQ06698 1435 aaKnown RBP6.78□□□□□ -1.32
RPB4YJL140W YIL165CP40446 119 aa6.78□□□□□ -1.32
RPB4YJL140W MEC3Q02574 474 aa6.78□□□□□ -1.32
RPB4YJL140W SLP1Q12232 587 aa6.78□□□□□ -1.32
RPB4YJL140W YCK2P23292 546 aaKnown RBP6.77□□□□□ -1.33
RPB4YJL140W NAR1P23503 491 aaKnown RBP6.77□□□□□ -1.33
RPB4YJL140W YIL177CP40434 1758 aa6.77□□□□□ -1.33
RPB4YJL140W YJL225CP40889 1758 aa6.77□□□□□ -1.33
RPB4YJL140W YDR215CQ12240 137 aa6.76□□□□□ -1.33
RPB4YJL140W SMC1P32908 1225 aa6.75□□□□□ -1.33
RPB4YJL140W TAT1P38085 619 aa6.75□□□□□ -1.33
RPB4YJL140W SLN1P39928 1220 aaPredicted RBP6.75□□□□□ -1.33
RPB4YJL140W SNF2P22082 1703 aa6.75□□□□□ -1.33
RPB4YJL140W SIR4P11978 1358 aa6.74□□□□□ -1.33
RPB4YJL140W MHP1P43638 1398 aa6.74□□□□□ -1.33
RPB4YJL140W SCT1P32784 759 aa6.74□□□□□ -1.33
RPB4YJL140W BOI1P38041 980 aaKnown RBP6.74□□□□□ -1.33
RPB4YJL140W AIM46P38885 310 aa6.74□□□□□ -1.33
RPB4YJL140W NTA1P40354 457 aa6.74□□□□□ -1.33
RPB4YJL140W EMG1Q06287 252 aaKnown RBP6.74□□□□□ -1.33
RPB4YJL140W BUG1Q12191 341 aa6.74□□□□□ -1.33
RPB4YJL140W BOL3P39724 118 aa6.73□□□□□ -1.33
RPB4YJL140W SUT1P53032 299 aaKnown RBP6.73□□□□□ -1.33
RPB4YJL140W PPT1P53043 513 aa6.73□□□□□ -1.33
Retrieved 100 of 5,963 RNA–protein pairs in 70.5 ms