RNA–Protein interactions for RNA: YIL148W

RPL40A, Transcript of Ubiquitin-ribosomal 60S subunit protein L40A fusion protein, yeastyeast

Gene RPL40A, Length 387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPL40AYIL148W MSC6Q08818 692 aaKnown RBP3.67□□□□□ -1.82
RPL40AYIL148W IPL1P38991 367 aa3.66□□□□□ -1.82
RPL40AYIL148W NTA1P40354 457 aa3.66□□□□□ -1.82
RPL40AYIL148W OYE3P41816 400 aaPredicted RBP3.66□□□□□ -1.82
RPL40AYIL148W SUT1P53032 299 aaKnown RBP3.66□□□□□ -1.82
RPL40AYIL148W RCM1P53972 490 aa3.66□□□□□ -1.82
RPL40AYIL148W NSI1Q12457 570 aa3.66□□□□□ -1.82
RPL40AYIL148W MGE1P38523 228 aa3.65□□□□□ -1.83
RPL40AYIL148W FET4P40988 552 aa3.65□□□□□ -1.83
RPL40AYIL148W SEN54Q02825 467 aaPredicted RBP3.65□□□□□ -1.83
RPL40AYIL148W YMR074CQ04773 145 aa3.65□□□□□ -1.83
RPL40AYIL148W TIF6Q12522 245 aaKnown RBP3.65□□□□□ -1.83
RPL40AYIL148W TRL1P09880 827 aaKnown RBP3.64□□□□□ -1.83
RPL40AYIL148W PYC2P32327 1180 aaKnown RBP3.64□□□□□ -1.83
RPL40AYIL148W FLR1P38124 548 aa3.64□□□□□ -1.83
RPL40AYIL148W PPX1P38698 397 aa3.64□□□□□ -1.83
RPL40AYIL148W MDJ2P42834 146 aa3.64□□□□□ -1.83
RPL40AYIL148W UFD2P54860 961 aa3.64□□□□□ -1.83
RPL40AYIL148W DOT1Q04089 582 aaKnown RBP3.64□□□□□ -1.83
RPL40AYIL148W LSO1Q3E827 93 aa3.64□□□□□ -1.83
RPL40AYIL148W SMC1P32908 1225 aa3.63□□□□□ -1.83
RPL40AYIL148W RAD55P38953 406 aa3.63□□□□□ -1.83
RPL40AYIL148W POL32P47110 350 aa3.63□□□□□ -1.83
RPL40AYIL148W GIS1Q03833 894 aa3.63□□□□□ -1.83
RPL40AYIL148W YOR059CQ08448 450 aaKnown RBP3.63□□□□□ -1.83
RPL40AYIL148W APC11Q12157 165 aa3.63□□□□□ -1.83
RPL40AYIL148W RPB10P22139 70 aa3.62□□□□□ -1.83
RPL40AYIL148W PSY2P40164 858 aa3.62□□□□□ -1.83
RPL40AYIL148W TRS120Q04183 1289 aa3.62□□□□□ -1.83
RPL40AYIL148W HDA2Q06629 674 aa3.62□□□□□ -1.83
RPL40AYIL148W PRP6P19735 899 aaPredicted RBP3.61□□□□□ -1.83
RPL40AYIL148W ADP1P25371 1049 aa3.61□□□□□ -1.83
RPL40AYIL148W GCD6P32501 712 aaKnown RBP3.61□□□□□ -1.83
RPL40AYIL148W IRS4P36115 615 aaKnown RBP3.61□□□□□ -1.83
RPL40AYIL148W EAR1Q03212 550 aa3.61□□□□□ -1.83
RPL40AYIL148W SSY1Q03770 852 aa3.61□□□□□ -1.83
RPL40AYIL148W NUT2Q06213 157 aa3.61□□□□□ -1.83
RPL40AYIL148W RPS4AP0CX35 261 aaKnown RBP3.6□□□□□ -1.83
RPL40AYIL148W RPS4BP0CX36 261 aaKnown RBP3.6□□□□□ -1.83
RPL40AYIL148W MET10P39692 1035 aa3.6□□□□□ -1.83
RPL40AYIL148W SAM37P50110 327 aa3.6□□□□□ -1.83
RPL40AYIL148W ORC3P54790 616 aa3.6□□□□□ -1.83
RPL40AYIL148W OXR1Q08952 273 aa3.6□□□□□ -1.83
RPL40AYIL148W LPX1Q12405 387 aaKnown RBP3.6□□□□□ -1.83
RPL40AYIL148W NAP1P25293 417 aaKnown RBP3.59□□□□□ -1.83
RPL40AYIL148W ECM2P38241 364 aaKnown RBP3.59□□□□□ -1.83
RPL40AYIL148W AIM3P38266 947 aaKnown RBP3.59□□□□□ -1.83
RPL40AYIL148W MSH6Q03834 1242 aa3.59□□□□□ -1.83
RPL40AYIL148W CIC1P38779 376 aaKnown RBP3.58□□□□□ -1.84
RPL40AYIL148W GCV1P48015 400 aa3.58□□□□□ -1.84
RPL40AYIL148W ALT1P52893 592 aa3.58□□□□□ -1.84
RPL40AYIL148W YNL011CP53980 444 aa3.58□□□□□ -1.84
RPL40AYIL148W CTR9P89105 1077 aa3.58□□□□□ -1.84
RPL40AYIL148W TRE1Q08919 783 aa3.58□□□□□ -1.84
RPL40AYIL148W WHI5Q12416 295 aa3.58□□□□□ -1.84
RPL40AYIL148W FRT1Q99332 602 aa3.58□□□□□ -1.84
RPL40AYIL148W PRO1P32264 428 aa3.57□□□□□ -1.84
RPL40AYIL148W PEX7P39108 375 aa3.57□□□□□ -1.84
RPL40AYIL148W MSH4P40965 878 aaPredicted RBP3.57□□□□□ -1.84
RPL40AYIL148W CDC55Q00362 526 aa3.57□□□□□ -1.84
RPL40AYIL148W BSC2Q05611 235 aa3.57□□□□□ -1.84
RPL40AYIL148W YIG1Q08956 461 aa3.57□□□□□ -1.84
RPL40AYIL148W ALG6Q12001 544 aaKnown RBP3.57□□□□□ -1.84
RPL40AYIL148W YLL054CQ12244 843 aa3.57□□□□□ -1.84
RPL40AYIL148W YDL177CQ12257 170 aa3.57□□□□□ -1.84
RPL40AYIL148W YVC1Q12324 675 aa3.57□□□□□ -1.84
RPL40AYIL148W COBP00163 385 aa3.56□□□□□ -1.84
RPL40AYIL148W OYE2Q03558 400 aaKnown RBP3.56□□□□□ -1.84
RPL40AYIL148W SVF1Q05515 481 aa3.56□□□□□ -1.84
RPL40AYIL148W NOC3Q07896 663 aaPredicted RBP3.56□□□□□ -1.84
RPL40AYIL148W HTS1P07263 546 aaKnown RBP3.55□□□□□ -1.84
RPL40AYIL148W MET4P32389 672 aa3.55□□□□□ -1.84
RPL40AYIL148W RPT1P33299 467 aaKnown RBP3.55□□□□□ -1.84
RPL40AYIL148W MRPL22P53881 309 aa3.55□□□□□ -1.84
RPL40AYIL148W ATE1P16639 503 aa3.54□□□□□ -1.84
RPL40AYIL148W NPR1P22211 790 aa3.54□□□□□ -1.84
RPL40AYIL148W PEP7P32609 515 aa3.54□□□□□ -1.84
RPL40AYIL148W SEC8P32855 1065 aa3.54□□□□□ -1.84
RPL40AYIL148W DUR3P33413 735 aa3.54□□□□□ -1.84
RPL40AYIL148W VPS35P34110 944 aa3.54□□□□□ -1.84
RPL40AYIL148W PTC7P38797 343 aa3.54□□□□□ -1.84
RPL40AYIL148W MEC3Q02574 474 aa3.54□□□□□ -1.84
RPL40AYIL148W CMR1Q12510 522 aaKnown RBP3.54□□□□□ -1.84
RPL40AYIL148W AIM44Q99299 758 aa3.54□□□□□ -1.84
RPL40AYIL148W RIM11P38615 370 aa3.53□□□□□ -1.84
RPL40AYIL148W ETP1P38748 585 aaKnown RBP3.53□□□□□ -1.84
RPL40AYIL148W RIM8P53179 542 aa3.53□□□□□ -1.84
RPL40AYIL148W PHO4P07270 312 aaKnown RBP3.52□□□□□ -1.85
RPL40AYIL148W KAR2P16474 682 aaKnown RBP3.52□□□□□ -1.85
RPL40AYIL148W NFS1P25374 497 aa3.52□□□□□ -1.85
RPL40AYIL148W TOD6P34219 525 aa3.52□□□□□ -1.85
RPL40AYIL148W REI1P38344 393 aaPredicted RBP3.52□□□□□ -1.85
RPL40AYIL148W GTS1P40956 396 aa3.52□□□□□ -1.85
RPL40AYIL148W DAK2P43550 591 aa3.52□□□□□ -1.85
RPL40AYIL148W RSC4Q02206 625 aa3.52□□□□□ -1.85
RPL40AYIL148W JIP5Q06214 492 aaPredicted RBP3.52□□□□□ -1.85
RPL40AYIL148W INP54Q08227 384 aaKnown RBP3.52□□□□□ -1.85
RPL40AYIL148W PRP5P21372 849 aaPredicted RBP3.51□□□□□ -1.85
RPL40AYIL148W PAM1P37304 830 aaKnown RBP3.51□□□□□ -1.85
RPL40AYIL148W MAD1P40957 749 aa3.51□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 27.5 ms