RNA–Protein interactions for RNA: YIL040W

APQ12, Transcript of Protein required for nuclear envelope morphology, yeastyeast

Gene APQ12, Length 417 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
APQ12YIL040W ALT1P52893 592 aa3.79□□□□□ -1.8
APQ12YIL040W YIG1Q08956 461 aa3.79□□□□□ -1.8
APQ12YIL040W LPX1Q12405 387 aaKnown RBP3.79□□□□□ -1.8
APQ12YIL040W ECM2P38241 364 aaKnown RBP3.78□□□□□ -1.8
APQ12YIL040W PEX7P39108 375 aa3.78□□□□□ -1.8
APQ12YIL040W GTS1P40956 396 aa3.78□□□□□ -1.8
APQ12YIL040W PNP1Q05788 311 aa3.78□□□□□ -1.8
APQ12YIL040W APC11Q12157 165 aa3.78□□□□□ -1.8
APQ12YIL040W REI1P38344 393 aaPredicted RBP3.77□□□□□ -1.81
APQ12YIL040W ETP1P38748 585 aaKnown RBP3.77□□□□□ -1.81
APQ12YIL040W CWC15Q03772 175 aaKnown RBP3.77□□□□□ -1.81
APQ12YIL040W HTS1P07263 546 aaKnown RBP3.76□□□□□ -1.81
APQ12YIL040W ABZ1P37254 787 aaPredicted RBP3.76□□□□□ -1.81
APQ12YIL040W MEC3Q02574 474 aa3.76□□□□□ -1.81
APQ12YIL040W YDL177CQ12257 170 aa3.76□□□□□ -1.81
APQ12YIL040W TUB2P02557 457 aaKnown RBP3.75□□□□□ -1.81
APQ12YIL040W SMY2P32909 740 aaKnown RBP3.75□□□□□ -1.81
APQ12YIL040W FOL2P51601 243 aaKnown RBP3.75□□□□□ -1.81
APQ12YIL040W ELA1P53861 379 aaPredicted RBP3.75□□□□□ -1.81
APQ12YIL040W AVO1Q08236 1176 aa3.75□□□□□ -1.81
APQ12YIL040W TAD3Q9URQ3 322 aa3.75□□□□□ -1.81
APQ12YIL040W SOD2P00447 233 aa3.74□□□□□ -1.81
APQ12YIL040W RPS13P05756 151 aaKnown RBP3.74□□□□□ -1.81
APQ12YIL040W NPR1P22211 790 aa3.74□□□□□ -1.81
APQ12YIL040W UTP22P53254 1237 aaPredicted RBP3.74□□□□□ -1.81
APQ12YIL040W YPL277CQ08989 487 aa3.74□□□□□ -1.81
APQ12YIL040W PNS1Q12412 539 aa3.74□□□□□ -1.81
APQ12YIL040W FUR4P05316 633 aaKnown RBP3.73□□□□□ -1.81
APQ12YIL040W NNK1P36003 928 aa3.73□□□□□ -1.81
APQ12YIL040W SHM2P37291 469 aaKnown RBP3.72□□□□□ -1.81
APQ12YIL040W SNO2P53823 222 aa3.72□□□□□ -1.81
APQ12YIL040W CTR9P89105 1077 aa3.72□□□□□ -1.81
APQ12YIL040W CMR1Q12510 522 aaKnown RBP3.72□□□□□ -1.81
APQ12YIL040W YLR358CO13565 187 aa3.71□□□□□ -1.82
APQ12YIL040W YGR045CP53229 120 aa3.71□□□□□ -1.82
APQ12YIL040W CLU1Q03690 1277 aaKnown RBP3.71□□□□□ -1.82
APQ12YIL040W TPP1Q03796 238 aa3.71□□□□□ -1.82
APQ12YIL040W YML083CQ04526 418 aa3.71□□□□□ -1.82
APQ12YIL040W LSO1Q3E827 93 aa3.71□□□□□ -1.82
APQ12YIL040W COBP00163 385 aa3.7□□□□□ -1.82
APQ12YIL040W RIM11P38615 370 aa3.7□□□□□ -1.82
APQ12YIL040W PUS7Q08647 676 aaKnown RBP3.7□□□□□ -1.82
APQ12YIL040W CTS1P29029 562 aa3.69□□□□□ -1.82
APQ12YIL040W YOR352WQ08816 343 aa3.69□□□□□ -1.82
APQ12YIL040W YHL012WP38709 493 aa3.68□□□□□ -1.82
APQ12YIL040W PRP5P21372 849 aaPredicted RBP3.67□□□□□ -1.82
APQ12YIL040W AIM26P32858 118 aa3.66□□□□□ -1.82
APQ12YIL040W NMD3P38861 518 aaKnown RBP3.66□□□□□ -1.82
APQ12YIL040W MPT5P39016 859 aaKnown RBP RIP-Chip data3.66□□□□□ -1.82not detected
APQ12YIL040W PRE10P21242 288 aaKnown RBP RIP-Chip data3.65□□□□□ -1.83not detected
APQ12YIL040W SSA4P22202 642 aaKnown RBP3.65□□□□□ -1.83
APQ12YIL040W DUR3P33413 735 aa3.65□□□□□ -1.83
APQ12YIL040W YPT53P36019 220 aa3.65□□□□□ -1.83
APQ12YIL040W BOL3P39724 118 aa3.65□□□□□ -1.83
APQ12YIL040W ARL1P38116 183 aaKnown RBP3.64□□□□□ -1.83
APQ12YIL040W SPT20P50875 604 aa3.64□□□□□ -1.83
APQ12YIL040W UBP3Q01477 912 aaKnown RBP RIP-Chip data3.64□□□□□ -1.83not detected
APQ12YIL040W TY1A-LR4P0C2I8 440 aaKnown RBP3.63□□□□□ -1.83
APQ12YIL040W TY1A-DR6P0CX70 440 aa3.63□□□□□ -1.83
APQ12YIL040W TY1A-ER1P0CX71 440 aa3.63□□□□□ -1.83
APQ12YIL040W TY1A-LR2P0CX72 440 aa3.63□□□□□ -1.83
APQ12YIL040W TY1A-PLP0CX73 440 aa3.63□□□□□ -1.83
APQ12YIL040W TY1A-JR1P0CX74 440 aa3.63□□□□□ -1.83
APQ12YIL040W TY1A-LR3P0CX75 440 aa3.63□□□□□ -1.83
APQ12YIL040W TY1A-ML2P0CX76 440 aa3.63□□□□□ -1.83
APQ12YIL040W MCM5P29496 775 aaKnown RBP3.63□□□□□ -1.83
APQ12YIL040W MDL2P33311 773 aa3.63□□□□□ -1.83
APQ12YIL040W YKL077WP36081 392 aa3.63□□□□□ -1.83
APQ12YIL040W UFD2P54860 961 aa3.63□□□□□ -1.83
APQ12YIL040W RSC4Q02206 625 aa3.63□□□□□ -1.83
APQ12YIL040W PMT7Q06644 662 aa3.63□□□□□ -1.83
APQ12YIL040W NOB1Q08444 459 aaKnown RBP3.63□□□□□ -1.83
APQ12YIL040W TY1A-GR1Q12085 440 aa3.63□□□□□ -1.83
APQ12YIL040W TY1A-PR3Q6Q5H1 440 aaKnown RBP3.63□□□□□ -1.83
APQ12YIL040W TY1A-OLQ92392 440 aaKnown RBP3.63□□□□□ -1.83
APQ12YIL040W TAT2P38967 592 aa3.62□□□□□ -1.83
APQ12YIL040W YLR257WQ06146 321 aaKnown RBP3.62□□□□□ -1.83
APQ12YIL040W SAM35P14693 329 aa3.61□□□□□ -1.83
APQ12YIL040W RET1P22276 1149 aaKnown RBP3.61□□□□□ -1.83
APQ12YIL040W GLO3P38682 493 aaKnown RBP3.61□□□□□ -1.83
APQ12YIL040W YAR028WP39548 234 aa3.61□□□□□ -1.83
APQ12YIL040W YAF9P53930 226 aa3.61□□□□□ -1.83
APQ12YIL040W HRK1Q08732 759 aaKnown RBP3.61□□□□□ -1.83
APQ12YIL040W TRM2P33753 639 aa3.6□□□□□ -1.83
APQ12YIL040W ATG14P38270 344 aa3.6□□□□□ -1.83
APQ12YIL040W HSE1P38753 452 aa3.6□□□□□ -1.83
APQ12YIL040W SLS1P42900 643 aa3.6□□□□□ -1.83
APQ12YIL040W SAP155P43612 1002 aa3.6□□□□□ -1.83
APQ12YIL040W BSC2Q05611 235 aa3.6□□□□□ -1.83
APQ12YIL040W SPS1P08458 490 aa3.59□□□□□ -1.83
APQ12YIL040W SHU2P38957 223 aa3.59□□□□□ -1.83
APQ12YIL040W NUT1P53114 1132 aa3.59□□□□□ -1.83
APQ12YIL040W SGD1Q06132 899 aa3.59□□□□□ -1.83
APQ12YIL040W PUS9Q12069 462 aa3.59□□□□□ -1.83
APQ12YIL040W FLP1P03870 423 aa3.58□□□□□ -1.84
APQ12YIL040W MTR4P47047 1073 aaKnown RBP3.58□□□□□ -1.84
APQ12YIL040W MSE1P48525 536 aa3.58□□□□□ -1.84
APQ12YIL040W YML122CQ03207 126 aa3.58□□□□□ -1.84
APQ12YIL040W YDR132CQ03900 495 aa3.58□□□□□ -1.84
APQ12YIL040W NBA1Q08229 501 aaKnown RBP3.58□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 7.4 ms