RNA–Protein interactions for RNA: YER111C

SWI4, Transcript of DNA binding component of the SBF complex (Swi4p-Swi6p), yeastyeast

Gene SWI4, Length 3,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI4YER111C FAR11P53917 953 aa1.79□□□□□ -2.12
SWI4YER111C RPN4Q03465 531 aa1.79□□□□□ -2.12
SWI4YER111C NAB6Q03735 1134 aaKnown RBP RIP-Chip data1.79□□□□□ -2.12not detected
SWI4YER111C FLC1Q08967 793 aa1.79□□□□□ -2.12
SWI4YER111C TY1A-DR3Q12441 440 aa1.79□□□□□ -2.12
SWI4YER111C SRM1P21827 482 aa1.78□□□□□ -2.12
SWI4YER111C MSH3P25336 1018 aa1.78□□□□□ -2.12
SWI4YER111C SFP1P32432 683 aa1.78□□□□□ -2.12
SWI4YER111C MCM7P38132 845 aa1.78□□□□□ -2.12
SWI4YER111C RSP5P39940 809 aaKnown RBP1.78□□□□□ -2.12
SWI4YER111C NEO1P40527 1151 aa1.78□□□□□ -2.12
SWI4YER111C MSH4P40965 878 aaPredicted RBP1.78□□□□□ -2.12
SWI4YER111C HUL4P40985 892 aa1.78□□□□□ -2.12
SWI4YER111C ITC1P53125 1264 aa1.78□□□□□ -2.12
SWI4YER111C EAF1Q06337 982 aa1.78□□□□□ -2.12
SWI4YER111C HSP60P19882 572 aaKnown RBP1.78□□□□□ -2.12
SWI4YER111C DAL1P32375 460 aa1.78□□□□□ -2.12
SWI4YER111C SLA1P32790 1244 aa1.78□□□□□ -2.12
SWI4YER111C CTR9P89105 1077 aa1.78□□□□□ -2.12
SWI4YER111C UBP2Q01476 1272 aa1.78□□□□□ -2.12
SWI4YER111C YMR265CQ03508 461 aaKnown RBP1.78□□□□□ -2.12
SWI4YER111C RSC2Q06488 889 aa1.78□□□□□ -2.12
SWI4YER111C YLR125WQ12138 136 aa1.78□□□□□ -2.12
SWI4YER111C CIT1P00890 479 aa1.78□□□□□ -2.13
SWI4YER111C INO1P11986 533 aa1.78□□□□□ -2.13
SWI4YER111C RPC31P17890 251 aa1.78□□□□□ -2.13
SWI4YER111C LYP1P32487 611 aa1.78□□□□□ -2.13
SWI4YER111C TOM20P35180 183 aa1.78□□□□□ -2.13
SWI4YER111C ALR2P43553 858 aa1.78□□□□□ -2.13
SWI4YER111C KRE33P53914 1056 aaKnown RBP1.78□□□□□ -2.13
SWI4YER111C ROD1Q02805 837 aa1.78□□□□□ -2.13
SWI4YER111C EST2Q06163 884 aa1.78□□□□□ -2.13
SWI4YER111C UBX5Q06682 500 aa1.78□□□□□ -2.13
SWI4YER111C DNF1P32660 1571 aa1.77□□□□□ -2.13
SWI4YER111C COBP00163 385 aa1.77□□□□□ -2.13
SWI4YER111C ERR1P0CX10 437 aa1.77□□□□□ -2.13
SWI4YER111C ERR2P0CX11 437 aa1.77□□□□□ -2.13
SWI4YER111C NPR1P22211 790 aa1.77□□□□□ -2.13
SWI4YER111C CHZ1P40019 153 aaPredicted RBP1.77□□□□□ -2.13
SWI4YER111C UBP15P50101 1230 aa1.77□□□□□ -2.13
SWI4YER111C ESC2Q06340 456 aa1.77□□□□□ -2.13
SWI4YER111C INO80P53115 1489 aa1.77□□□□□ -2.13
SWI4YER111C ADR1P07248 1323 aa1.77□□□□□ -2.13
SWI4YER111C DUT1P33317 147 aa1.77□□□□□ -2.13
SWI4YER111C MRP8P35719 219 aa1.77□□□□□ -2.13
SWI4YER111C VBA5P36172 582 aa1.77□□□□□ -2.13
SWI4YER111C GGA2P38817 585 aaKnown RBP1.77□□□□□ -2.13
SWI4YER111C BUD6P41697 788 aa1.77□□□□□ -2.13
SWI4YER111C YGL140CP53120 1219 aa1.77□□□□□ -2.13
SWI4YER111C YGR053CP53234 283 aa1.77□□□□□ -2.13
SWI4YER111C EEB1Q02891 456 aa1.77□□□□□ -2.13
SWI4YER111C YMR074CQ04773 145 aa1.77□□□□□ -2.13
SWI4YER111C YDL124WQ07551 312 aaKnown RBP1.77□□□□□ -2.13
SWI4YER111C REC8Q12188 680 aa1.77□□□□□ -2.13
SWI4YER111C TRP2P00899 507 aaKnown RBP1.76□□□□□ -2.13
SWI4YER111C RER2P35196 286 aa1.76□□□□□ -2.13
SWI4YER111C CRP1P38845 465 aaKnown RBP1.76□□□□□ -2.13
SWI4YER111C GEM1P39722 662 aa1.76□□□□□ -2.13
SWI4YER111C YEN1P40028 759 aa1.76□□□□□ -2.13
SWI4YER111C LSB6P42951 607 aa1.76□□□□□ -2.13
SWI4YER111C YGL176CP46945 554 aa1.76□□□□□ -2.13
SWI4YER111C MTR4P47047 1073 aaKnown RBP1.76□□□□□ -2.13
SWI4YER111C YJR142WP47173 342 aa1.76□□□□□ -2.13
SWI4YER111C DNM1P54861 757 aa1.76□□□□□ -2.13
SWI4YER111C GCR2Q01722 534 aa1.76□□□□□ -2.13
SWI4YER111C FMP25Q08023 583 aa1.76□□□□□ -2.13
SWI4YER111C GLO4Q12320 285 aa1.76□□□□□ -2.13
SWI4YER111C SEC23P15303 768 aaKnown RBP1.76□□□□□ -2.13
SWI4YER111C FPS1P23900 669 aa1.76□□□□□ -2.13
SWI4YER111C PUF4P25339 888 aaKnown RBP RIP-Chip data1.76□□□□□ -2.13not detected
SWI4YER111C RPL8BP29453 256 aaKnown RBP1.76□□□□□ -2.13
SWI4YER111C GRX7P38068 203 aa1.76□□□□□ -2.13
SWI4YER111C MBP1P39678 833 aa1.76□□□□□ -2.13
SWI4YER111C FET4P40988 552 aa1.76□□□□□ -2.13
SWI4YER111C HLJ1P48353 224 aa1.76□□□□□ -2.13
SWI4YER111C ERP6P53198 216 aa1.76□□□□□ -2.13
SWI4YER111C SOK2P53438 785 aaPredicted RBP1.76□□□□□ -2.13
SWI4YER111C MSH6Q03834 1242 aa1.76□□□□□ -2.13
SWI4YER111C HDA2Q06629 674 aa1.76□□□□□ -2.13
SWI4YER111C CMR1Q12510 522 aaKnown RBP1.76□□□□□ -2.13
SWI4YER111C DPS1P04802 557 aaKnown RBP1.76□□□□□ -2.13
SWI4YER111C RPP1AP05318 106 aaPredicted RBP1.76□□□□□ -2.13
SWI4YER111C FUS1P11710 512 aa1.76□□□□□ -2.13
SWI4YER111C AGP1P25376 633 aa1.76□□□□□ -2.13
SWI4YER111C SBA1P28707 216 aaKnown RBP1.76□□□□□ -2.13
SWI4YER111C PBY1P38254 753 aa1.76□□□□□ -2.13
SWI4YER111C CCC2P38995 1004 aa1.76□□□□□ -2.13
SWI4YER111C IRR1P40541 1150 aa1.76□□□□□ -2.13
SWI4YER111C SLS1P42900 643 aa1.76□□□□□ -2.13
SWI4YER111C SKP1P52286 194 aa1.76□□□□□ -2.13
SWI4YER111C SCW11P53189 542 aa1.76□□□□□ -2.13
SWI4YER111C UTP14Q04500 899 aaKnown RBP1.76□□□□□ -2.13
SWI4YER111C OPT2Q06593 877 aa1.76□□□□□ -2.13
SWI4YER111C AVO1Q08236 1176 aa1.76□□□□□ -2.13
SWI4YER111C CDC19P00549 500 aaKnown RBP1.75□□□□□ -2.13
SWI4YER111C CAN1P04817 590 aa1.75□□□□□ -2.13
SWI4YER111C TOM70P07213 617 aaKnown RBP1.75□□□□□ -2.13
SWI4YER111C HVG1P0CE11 249 aa1.75□□□□□ -2.13
SWI4YER111C SBP1P10080 294 aaKnown RBP1.75□□□□□ -2.13
SWI4YER111C SSB1P11484 613 aaKnown RBP1.75□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 68 ms