RNA–Protein interactions for RNA: YDR469W

SDC1, Transcript of Subunit of the COMPASS (Set1C) complex, yeastyeast

Gene SDC1, Length 528 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDC1YDR469W PEX7P39108 375 aa4.83□□□□□ -1.64
SDC1YDR469W ALT1P52893 592 aa4.83□□□□□ -1.64
SDC1YDR469W YVC1Q12324 675 aa4.83□□□□□ -1.64
SDC1YDR469W LSO1Q3E827 93 aa4.83□□□□□ -1.64
SDC1YDR469W COBP00163 385 aa4.82□□□□□ -1.64
SDC1YDR469W HTS1P07263 546 aaKnown RBP4.82□□□□□ -1.64
SDC1YDR469W NPR1P22211 790 aa4.81□□□□□ -1.64
SDC1YDR469W PTC7P38797 343 aa4.8□□□□□ -1.64
SDC1YDR469W MRPL22P53881 309 aa4.8□□□□□ -1.64
SDC1YDR469W MEC3Q02574 474 aa4.8□□□□□ -1.64
SDC1YDR469W NOB1Q08444 459 aaKnown RBP4.8□□□□□ -1.64
SDC1YDR469W YDL177CQ12257 170 aa4.8□□□□□ -1.64
SDC1YDR469W CMR1Q12510 522 aaKnown RBP4.8□□□□□ -1.64
SDC1YDR469W DUR3P33413 735 aa4.79□□□□□ -1.64
SDC1YDR469W REI1P38344 393 aaPredicted RBP4.79□□□□□ -1.64
SDC1YDR469W RIM11P38615 370 aa4.79□□□□□ -1.64
SDC1YDR469W NFS1P25374 497 aa4.78□□□□□ -1.64
SDC1YDR469W FUR4P05316 633 aaKnown RBP4.77□□□□□ -1.65
SDC1YDR469W ETP1P38748 585 aaKnown RBP4.77□□□□□ -1.65
SDC1YDR469W BOL3P39724 118 aa4.77□□□□□ -1.65
SDC1YDR469W GTS1P40956 396 aa4.77□□□□□ -1.65
SDC1YDR469W UTP22P53254 1237 aaPredicted RBP4.77□□□□□ -1.65
SDC1YDR469W ELA1P53861 379 aaPredicted RBP4.77□□□□□ -1.65
SDC1YDR469W TOD6P34219 525 aa4.76□□□□□ -1.65
SDC1YDR469W ECM2P38241 364 aaKnown RBP4.76□□□□□ -1.65
SDC1YDR469W RIM8P53179 542 aa4.76□□□□□ -1.65
SDC1YDR469W YGR045CP53229 120 aa4.76□□□□□ -1.65
SDC1YDR469W SMY2P32909 740 aaKnown RBP4.75□□□□□ -1.65
SDC1YDR469W PRP5P21372 849 aaPredicted RBP4.74□□□□□ -1.65
SDC1YDR469W DMA2P53924 522 aa4.73□□□□□ -1.65
SDC1YDR469W SSA4P22202 642 aaKnown RBP4.72□□□□□ -1.65
SDC1YDR469W AVO1Q08236 1176 aa4.72□□□□□ -1.65
SDC1YDR469W YPL277CQ08989 487 aa4.72□□□□□ -1.65
SDC1YDR469W SOD2P00447 233 aa4.71□□□□□ -1.66
SDC1YDR469W TY1A-LR4P0C2I8 440 aaKnown RBP4.71□□□□□ -1.66
SDC1YDR469W TY1A-DR6P0CX70 440 aa4.71□□□□□ -1.66
SDC1YDR469W TY1A-ER1P0CX71 440 aa4.71□□□□□ -1.66
SDC1YDR469W TY1A-LR2P0CX72 440 aa4.71□□□□□ -1.66
SDC1YDR469W TY1A-PLP0CX73 440 aa4.71□□□□□ -1.66
SDC1YDR469W TY1A-JR1P0CX74 440 aa4.71□□□□□ -1.66
SDC1YDR469W TY1A-LR3P0CX75 440 aa4.71□□□□□ -1.66
SDC1YDR469W TY1A-ML2P0CX76 440 aa4.71□□□□□ -1.66
SDC1YDR469W NNK1P36003 928 aa4.71□□□□□ -1.66
SDC1YDR469W RSC4Q02206 625 aa4.71□□□□□ -1.66
SDC1YDR469W TY1A-GR1Q12085 440 aa4.71□□□□□ -1.66
SDC1YDR469W TY1A-PR3Q6Q5H1 440 aaKnown RBP4.71□□□□□ -1.66
SDC1YDR469W TY1A-OLQ92392 440 aaKnown RBP4.71□□□□□ -1.66
SDC1YDR469W RPS13P05756 151 aaKnown RBP4.7□□□□□ -1.66
SDC1YDR469W ABZ1P37254 787 aaPredicted RBP4.7□□□□□ -1.66
SDC1YDR469W NMD3P38861 518 aaKnown RBP4.7□□□□□ -1.66
SDC1YDR469W TPP1Q03796 238 aa4.7□□□□□ -1.66
SDC1YDR469W GSF2Q04697 403 aaKnown RBP4.7□□□□□ -1.66
SDC1YDR469W PUS7Q08647 676 aaKnown RBP4.7□□□□□ -1.66
SDC1YDR469W SHM2P37291 469 aaKnown RBP4.68□□□□□ -1.66
SDC1YDR469W GLO3P38682 493 aaKnown RBP4.67□□□□□ -1.66
SDC1YDR469W CLU1Q03690 1277 aaKnown RBP4.67□□□□□ -1.66
SDC1YDR469W UFD2P54860 961 aa4.66□□□□□ -1.66
SDC1YDR469W TAD3Q9URQ3 322 aa4.66□□□□□ -1.66
SDC1YDR469W TUB2P02557 457 aaKnown RBP4.65□□□□□ -1.67
SDC1YDR469W CTS1P29029 562 aa4.65□□□□□ -1.67
SDC1YDR469W SLS1P42900 643 aa4.65□□□□□ -1.67
SDC1YDR469W SAP155P43612 1002 aa4.65□□□□□ -1.67
SDC1YDR469W FOL2P51601 243 aaKnown RBP4.65□□□□□ -1.67
SDC1YDR469W SNO2P53823 222 aa4.65□□□□□ -1.67
SDC1YDR469W YAF9P53930 226 aa4.65□□□□□ -1.67
SDC1YDR469W FLP1P03870 423 aa4.64□□□□□ -1.67
SDC1YDR469W SAM35P14693 329 aa4.64□□□□□ -1.67
SDC1YDR469W MCM5P29496 775 aaKnown RBP4.64□□□□□ -1.67
SDC1YDR469W ARL1P38116 183 aaKnown RBP4.64□□□□□ -1.67
SDC1YDR469W YHL012WP38709 493 aa4.64□□□□□ -1.67
SDC1YDR469W QDR1P40475 563 aa4.64□□□□□ -1.67
SDC1YDR469W NUT1P53114 1132 aa4.64□□□□□ -1.67
SDC1YDR469W YLR358CO13565 187 aa4.63□□□□□ -1.67
SDC1YDR469W PMT7Q06644 662 aa4.63□□□□□ -1.67
SDC1YDR469W YNL011CP53980 444 aa4.62□□□□□ -1.67
SDC1YDR469W BSC2Q05611 235 aa4.62□□□□□ -1.67
SDC1YDR469W YLR257WQ06146 321 aaKnown RBP4.62□□□□□ -1.67
SDC1YDR469W PNS1Q12412 539 aa4.62□□□□□ -1.67
SDC1YDR469W PRE10P21242 288 aaKnown RBP RIP-Chip data4.61□□□□□ -1.67not detected
SDC1YDR469W RET1P22276 1149 aaKnown RBP4.61□□□□□ -1.67
SDC1YDR469W AIM26P32858 118 aa4.61□□□□□ -1.67
SDC1YDR469W YKL077WP36081 392 aa4.61□□□□□ -1.67
SDC1YDR469W MON1P53129 644 aa4.61□□□□□ -1.67
SDC1YDR469W EXO5P38289 585 aa4.6□□□□□ -1.67
SDC1YDR469W NEM1P38757 446 aa4.6□□□□□ -1.67
SDC1YDR469W YAR028WP39548 234 aa4.6□□□□□ -1.67
SDC1YDR469W KAR5Q04746 504 aa4.6□□□□□ -1.67
SDC1YDR469W MDL2P33311 773 aa4.59□□□□□ -1.67
SDC1YDR469W INP54Q08227 384 aaKnown RBP4.59□□□□□ -1.67
SDC1YDR469W MNL2Q12205 849 aa4.59□□□□□ -1.67
SDC1YDR469W MPT5P39016 859 aaKnown RBP RIP-Chip data4.58□□□□□ -1.68not detected
SDC1YDR469W TAT2P38967 592 aa4.57□□□□□ -1.68
SDC1YDR469W SPT20P50875 604 aa4.57□□□□□ -1.68
SDC1YDR469W UBP3Q01477 912 aaKnown RBP RIP-Chip data4.57□□□□□ -1.68not detected
SDC1YDR469W LEO1P38439 464 aa4.56□□□□□ -1.68
SDC1YDR469W RVS167P39743 482 aaKnown RBP4.56□□□□□ -1.68
SDC1YDR469W CDC55Q00362 526 aa4.56□□□□□ -1.68
SDC1YDR469W YDR132CQ03900 495 aa4.56□□□□□ -1.68
SDC1YDR469W TRS120Q04183 1289 aa4.56□□□□□ -1.68
SDC1YDR469W RSA3Q05942 220 aaKnown RBP4.56□□□□□ -1.68
Retrieved 100 of 5,963 RNA–protein pairs in 11.5 ms