RNA–Protein interactions for RNA: YDR138W

HPR1, Transcript of Subunit of THO/TREX complexes, yeastyeast

Gene HPR1, Length 2,259 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HPR1YDR138W PAF1P38351 445 aa5.3□□□□□ -1.56
HPR1YDR138W YJR120WP47157 116 aa5.3□□□□□ -1.56
HPR1YDR138W CMR1Q12510 522 aaKnown RBP5.3□□□□□ -1.56
HPR1YDR138W SEC23P15303 768 aaKnown RBP5.29□□□□□ -1.56
HPR1YDR138W RDH54P38086 958 aa5.29□□□□□ -1.56
HPR1YDR138W YIL165CP40446 119 aa5.29□□□□□ -1.56
HPR1YDR138W PEX8P53248 589 aa5.29□□□□□ -1.56
HPR1YDR138W ATG13Q06628 738 aa5.29□□□□□ -1.56
HPR1YDR138W YPL066WQ12194 479 aa5.29□□□□□ -1.56
HPR1YDR138W RAD27P26793 382 aa5.28□□□□□ -1.56
HPR1YDR138W SEC6P32844 805 aa5.28□□□□□ -1.56
HPR1YDR138W AIM46P38885 310 aa5.28□□□□□ -1.56
HPR1YDR138W RVS167P39743 482 aaKnown RBP5.28□□□□□ -1.56
HPR1YDR138W GPG1P53130 126 aa5.28□□□□□ -1.56
HPR1YDR138W SHE9Q04172 456 aa5.28□□□□□ -1.56
HPR1YDR138W PSH1Q12161 406 aa5.28□□□□□ -1.56
HPR1YDR138W SBP1P10080 294 aaKnown RBP5.28□□□□□ -1.56
HPR1YDR138W KAR2P16474 682 aaKnown RBP5.28□□□□□ -1.56
HPR1YDR138W MKK2P32491 506 aa5.28□□□□□ -1.56
HPR1YDR138W CLA4P48562 842 aa5.28□□□□□ -1.56
HPR1YDR138W YNR040WP53736 256 aa5.28□□□□□ -1.56
HPR1YDR138W NOG1Q02892 647 aaKnown RBP5.28□□□□□ -1.56
HPR1YDR138W PEX28P38848 579 aa5.27□□□□□ -1.57
HPR1YDR138W IRR1P40541 1150 aa5.27□□□□□ -1.57
HPR1YDR138W CUS1Q02554 436 aaPredicted RBP5.27□□□□□ -1.57
HPR1YDR138W MET32Q12041 191 aa5.27□□□□□ -1.57
HPR1YDR138W HSP60P19882 572 aaKnown RBP5.27□□□□□ -1.57
HPR1YDR138W PRP5P21372 849 aaPredicted RBP5.27□□□□□ -1.57
HPR1YDR138W SUB1P54000 292 aaKnown RBP5.27□□□□□ -1.57
HPR1YDR138W SVL3Q03088 825 aaKnown RBP5.27□□□□□ -1.57
HPR1YDR138W MEF1P25039 761 aa5.26□□□□□ -1.57
HPR1YDR138W PDC6P26263 563 aaKnown RBP5.26□□□□□ -1.57
HPR1YDR138W DLD3P39976 496 aaKnown RBP5.26□□□□□ -1.57
HPR1YDR138W ALA1P40825 983 aaKnown RBP5.26□□□□□ -1.57
HPR1YDR138W SKP1P52286 194 aa5.26□□□□□ -1.57
HPR1YDR138W MSN5P52918 1224 aa5.26□□□□□ -1.57
HPR1YDR138W TMA46Q12000 345 aaKnown RBP5.26□□□□□ -1.57
HPR1YDR138W IRE1P32361 1115 aa5.26□□□□□ -1.57
HPR1YDR138W MOT2P34909 587 aaKnown RBP5.26□□□□□ -1.57
HPR1YDR138W APM2P38700 605 aa5.26□□□□□ -1.57
HPR1YDR138W UBP9P39967 754 aa5.26□□□□□ -1.57
HPR1YDR138W UTP8P53276 713 aaKnown RBP5.26□□□□□ -1.57
HPR1YDR138W EAF1Q06337 982 aa5.26□□□□□ -1.57
HPR1YDR138W GAL11P19659 1081 aa5.25□□□□□ -1.57
HPR1YDR138W NPR1P22211 790 aa5.25□□□□□ -1.57
HPR1YDR138W MSH3P25336 1018 aa5.25□□□□□ -1.57
HPR1YDR138W ROD1Q02805 837 aa5.25□□□□□ -1.57
HPR1YDR138W SPO75Q07798 868 aa5.25□□□□□ -1.57
HPR1YDR138W YOR378WQ08902 515 aa5.25□□□□□ -1.57
HPR1YDR138W LEU1P07264 779 aaKnown RBP5.25□□□□□ -1.57
HPR1YDR138W FUI1P38196 639 aa5.25□□□□□ -1.57
HPR1YDR138W SIW14P53965 281 aa5.25□□□□□ -1.57
HPR1YDR138W TGL2P54857 326 aa5.25□□□□□ -1.57
HPR1YDR138W TMA17Q12513 150 aa5.25□□□□□ -1.57
HPR1YDR138W SRF1Q12516 437 aa5.25□□□□□ -1.57
HPR1YDR138W TOP3P13099 656 aa5.24□□□□□ -1.57
HPR1YDR138W SBA1P28707 216 aaKnown RBP5.24□□□□□ -1.57
HPR1YDR138W GRX7P38068 203 aa5.24□□□□□ -1.57
HPR1YDR138W PEX13P80667 386 aa5.24□□□□□ -1.57
HPR1YDR138W TFB2Q02939 513 aa5.24□□□□□ -1.57
HPR1YDR138W VPS72Q03388 795 aa5.24□□□□□ -1.57
HPR1YDR138W OSH2Q12451 1283 aa5.24□□□□□ -1.57
HPR1YDR138W HVG1P0CE11 249 aa5.23□□□□□ -1.57
HPR1YDR138W LYP1P32487 611 aa5.23□□□□□ -1.57
HPR1YDR138W HBS1P32769 611 aaKnown RBP5.23□□□□□ -1.57
HPR1YDR138W GGA2P38817 585 aaKnown RBP5.23□□□□□ -1.57
HPR1YDR138W MBP1P39678 833 aa5.23□□□□□ -1.57
HPR1YDR138W RSM26P47141 266 aa5.23□□□□□ -1.57
HPR1YDR138W YLR001CQ07895 862 aa5.23□□□□□ -1.57
HPR1YDR138W RPP2BP02400 110 aaKnown RBP5.23□□□□□ -1.57
HPR1YDR138W ARE1P25628 610 aa5.23□□□□□ -1.57
HPR1YDR138W MRF1P30775 413 aaPredicted RBP5.23□□□□□ -1.57
HPR1YDR138W MRP8P35719 219 aa5.23□□□□□ -1.57
HPR1YDR138W ERP6P53198 216 aa5.23□□□□□ -1.57
HPR1YDR138W TIF35Q04067 274 aaKnown RBP5.23□□□□□ -1.57
HPR1YDR138W PIF1P07271 859 aa5.22□□□□□ -1.57
HPR1YDR138W CHL1P22516 861 aaPredicted RBP5.22□□□□□ -1.57
HPR1YDR138W MRC1P25588 1096 aa5.22□□□□□ -1.57
HPR1YDR138W EXO5P38289 585 aa5.22□□□□□ -1.57
HPR1YDR138W GDH3P39708 457 aa5.22□□□□□ -1.57
HPR1YDR138W PMT7Q06644 662 aa5.22□□□□□ -1.57
HPR1YDR138W SEC26P41810 973 aaKnown RBP5.22□□□□□ -1.57
HPR1YDR138W HSV2P50079 448 aaPredicted RBP5.22□□□□□ -1.57
HPR1YDR138W TY1A-LR4P0C2I8 440 aaKnown RBP5.21□□□□□ -1.58
HPR1YDR138W TY1A-DR6P0CX70 440 aa5.21□□□□□ -1.58
HPR1YDR138W TY1A-ER1P0CX71 440 aa5.21□□□□□ -1.58
HPR1YDR138W TY1A-LR2P0CX72 440 aa5.21□□□□□ -1.58
HPR1YDR138W TY1A-PLP0CX73 440 aa5.21□□□□□ -1.58
HPR1YDR138W TY1A-JR1P0CX74 440 aa5.21□□□□□ -1.58
HPR1YDR138W TY1A-LR3P0CX75 440 aa5.21□□□□□ -1.58
HPR1YDR138W TY1A-ML2P0CX76 440 aa5.21□□□□□ -1.58
HPR1YDR138W SIS1P25294 352 aaKnown RBP5.21□□□□□ -1.58
HPR1YDR138W PBY1P38254 753 aa5.21□□□□□ -1.58
HPR1YDR138W ALR2P43553 858 aa5.21□□□□□ -1.58
HPR1YDR138W HED1Q03937 162 aa5.21□□□□□ -1.58
HPR1YDR138W TY1A-GR1Q12085 440 aa5.21□□□□□ -1.58
HPR1YDR138W TY1A-PR3Q6Q5H1 440 aaKnown RBP5.21□□□□□ -1.58
HPR1YDR138W TY1A-OLQ92392 440 aaKnown RBP5.21□□□□□ -1.58
HPR1YDR138W TFA2P36145 328 aa5.21□□□□□ -1.58
HPR1YDR138W AAD14P42884 376 aa5.21□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 40 ms