RNA–Protein interactions for RNA: YDR108W

TRS85, Transcript of Component of transport protein particle (TRAPP) complex III, yeastyeast

Gene TRS85, Length 2,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRS85YDR108W MET4P32389 672 aa4.61□□□□□ -1.67
TRS85YDR108W MET10P39692 1035 aa4.61□□□□□ -1.67
TRS85YDR108W YIL092WP40497 633 aa4.61□□□□□ -1.67
TRS85YDR108W FAR11P53917 953 aa4.61□□□□□ -1.67
TRS85YDR108W HRQ1Q05549 1077 aa4.61□□□□□ -1.67
TRS85YDR108W COG4Q06096 861 aa4.61□□□□□ -1.67
TRS85YDR108W MRD1Q06106 887 aaKnown RBP4.61□□□□□ -1.67
TRS85YDR108W OMS1Q06668 471 aa4.61□□□□□ -1.67
TRS85YDR108W ENV9Q08651 330 aa4.61□□□□□ -1.67
TRS85YDR108W WHI5Q12416 295 aa4.61□□□□□ -1.67
TRS85YDR108W SAC3P46674 1301 aa4.61□□□□□ -1.67
TRS85YDR108W KRS1P15180 591 aaKnown RBP4.61□□□□□ -1.67
TRS85YDR108W SEC6P32844 805 aa4.61□□□□□ -1.67
TRS85YDR108W LHS1P36016 881 aa4.61□□□□□ -1.67
TRS85YDR108W SPC42P36094 363 aa4.61□□□□□ -1.67
TRS85YDR108W ATG14P38270 344 aa4.61□□□□□ -1.67
TRS85YDR108W SPT8P38915 602 aa4.61□□□□□ -1.67
TRS85YDR108W BUD27P43573 796 aaKnown RBP RIP-Chip data4.61□□□□□ -1.67not detected
TRS85YDR108W ORM1P53224 222 aa4.61□□□□□ -1.67
TRS85YDR108W VPS20Q04272 221 aa4.61□□□□□ -1.67
TRS85YDR108W PUS5Q06244 254 aa4.61□□□□□ -1.67
TRS85YDR108W YOR1P53049 1477 aa4.61□□□□□ -1.67
TRS85YDR108W SEC23P15303 768 aaKnown RBP4.6□□□□□ -1.67
TRS85YDR108W YEF3P16521 1044 aaKnown RBP4.6□□□□□ -1.67
TRS85YDR108W SSA4P22202 642 aaKnown RBP4.6□□□□□ -1.67
TRS85YDR108W CSE1P33307 960 aa4.6□□□□□ -1.67
TRS85YDR108W GUA1P38625 525 aaKnown RBP4.6□□□□□ -1.67
TRS85YDR108W SET2P46995 733 aaKnown RBP4.6□□□□□ -1.67
TRS85YDR108W YMR111CQ04461 462 aaPredicted RBP4.6□□□□□ -1.67
TRS85YDR108W YPR172WQ06608 200 aa4.6□□□□□ -1.67
TRS85YDR108W ESC1Q03661 1658 aaKnown RBP4.6□□□□□ -1.67
TRS85YDR108W ARO1P08566 1588 aaKnown RBP4.6□□□□□ -1.67
TRS85YDR108W BIK1P11709 440 aa4.6□□□□□ -1.67
TRS85YDR108W DLD1P32891 587 aa4.6□□□□□ -1.67
TRS85YDR108W PET112P33893 541 aa4.6□□□□□ -1.67
TRS85YDR108W ASH1P34233 588 aa4.6□□□□□ -1.67
TRS85YDR108W ECM4P36156 370 aa4.6□□□□□ -1.67
TRS85YDR108W EFM2P38347 419 aa4.6□□□□□ -1.67
TRS85YDR108W HYR1P40581 163 aaKnown RBP4.6□□□□□ -1.67
TRS85YDR108W YNR021WP53723 404 aaKnown RBP4.6□□□□□ -1.67
TRS85YDR108W BET4Q00618 327 aa4.6□□□□□ -1.67
TRS85YDR108W CUS1Q02554 436 aaPredicted RBP4.6□□□□□ -1.67
TRS85YDR108W MMR1Q06324 491 aa4.6□□□□□ -1.67
TRS85YDR108W PSK1P31374 1356 aa4.59□□□□□ -1.67
TRS85YDR108W SUI3P09064 285 aaKnown RBP4.59□□□□□ -1.67
TRS85YDR108W PRP16P15938 1071 aaPredicted RBP4.59□□□□□ -1.67
TRS85YDR108W CLB4P24871 460 aa4.59□□□□□ -1.67
TRS85YDR108W CDC10P25342 322 aaKnown RBP4.59□□□□□ -1.67
TRS85YDR108W GBP2P25555 427 aaKnown RBP RIP-Chip data4.59□□□□□ -1.67not detected
TRS85YDR108W BUD14P27637 709 aa4.59□□□□□ -1.67
TRS85YDR108W UBP13P38187 747 aa4.59□□□□□ -1.67
TRS85YDR108W SSZ1P38788 538 aaKnown RBP4.59□□□□□ -1.67
TRS85YDR108W ILM1P47155 203 aa4.59□□□□□ -1.67
TRS85YDR108W GYP7P48365 746 aa4.59□□□□□ -1.67
TRS85YDR108W HOS2P53096 452 aaPredicted RBP4.59□□□□□ -1.67
TRS85YDR108W VTC3Q02725 835 aa4.59□□□□□ -1.67
TRS85YDR108W FMP30Q02883 468 aa4.59□□□□□ -1.67
TRS85YDR108W HEH2Q03281 663 aa4.59□□□□□ -1.67
TRS85YDR108W ERB1Q04660 807 aaKnown RBP4.59□□□□□ -1.67
TRS85YDR108W ATG9Q12142 997 aa4.59□□□□□ -1.67
TRS85YDR108W RUD3Q12234 484 aaKnown RBP4.59□□□□□ -1.67
TRS85YDR108W AFT1P22149 690 aa4.58□□□□□ -1.68
TRS85YDR108W VPS35P34110 944 aa4.58□□□□□ -1.68
TRS85YDR108W TFC3P34111 1160 aa4.58□□□□□ -1.68
TRS85YDR108W OSH3P38713 996 aaKnown RBP4.58□□□□□ -1.68
TRS85YDR108W NUP60P39705 539 aa4.58□□□□□ -1.68
TRS85YDR108W VID28P40547 921 aa4.58□□□□□ -1.68
TRS85YDR108W AIM21P40563 679 aa4.58□□□□□ -1.68
TRS85YDR108W MAD1P40957 749 aa4.58□□□□□ -1.68
TRS85YDR108W SEC5P89102 971 aa4.58□□□□□ -1.68
TRS85YDR108W MSH6Q03834 1242 aa4.58□□□□□ -1.68
TRS85YDR108W YDR444WQ04093 687 aa4.58□□□□□ -1.68
TRS85YDR108W EIS1Q05050 843 aaKnown RBP4.58□□□□□ -1.68
TRS85YDR108W HEL2Q05580 639 aaKnown RBP4.58□□□□□ -1.68
TRS85YDR108W SDH5Q08230 162 aa4.58□□□□□ -1.68
TRS85YDR108W ABP140Q08641 628 aaKnown RBP4.58□□□□□ -1.68
TRS85YDR108W MET7Q08645 548 aa4.58□□□□□ -1.68
TRS85YDR108W ATG2P53855 1592 aa4.58□□□□□ -1.68
TRS85YDR108W TY3B-IQ7LHG5 1498 aaKnown RBP4.58□□□□□ -1.68
TRS85YDR108W SPE2P21182 396 aa4.58□□□□□ -1.68
TRS85YDR108W HIR2P32480 875 aa4.58□□□□□ -1.68
TRS85YDR108W SRL3P36167 246 aa4.58□□□□□ -1.68
TRS85YDR108W CTH1P47976 325 aa4.58□□□□□ -1.68
TRS85YDR108W RTS3P53289 263 aa4.58□□□□□ -1.68
TRS85YDR108W RIA1P53893 1110 aa4.58□□□□□ -1.68
TRS85YDR108W GDE1Q02979 1223 aa4.58□□□□□ -1.68
TRS85YDR108W PLP1Q04004 230 aa4.58□□□□□ -1.68
TRS85YDR108W RBA50Q04418 439 aa4.58□□□□□ -1.68
TRS85YDR108W YKU80Q04437 629 aa4.58□□□□□ -1.68
TRS85YDR108W FAR8Q05040 523 aa4.58□□□□□ -1.68
TRS85YDR108W YDL176WQ12027 708 aa4.58□□□□□ -1.68
TRS85YDR108W YML133CQ03099 1374 aa4.58□□□□□ -1.68
TRS85YDR108W YLL067CQ07888 1374 aa4.58□□□□□ -1.68
TRS85YDR108W YLL066CQ99208 1374 aa4.58□□□□□ -1.68
TRS85YDR108W GCD2P12754 651 aaPredicted RBP4.57□□□□□ -1.68
TRS85YDR108W PMR1P13586 950 aa4.57□□□□□ -1.68
TRS85YDR108W SIT4P20604 311 aa4.57□□□□□ -1.68
TRS85YDR108W CPS1P27614 576 aa4.57□□□□□ -1.68
TRS85YDR108W GLC3P32775 704 aa4.57□□□□□ -1.68
TRS85YDR108W TTI1P36097 1038 aa4.57□□□□□ -1.68
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms