RNA–Protein interactions for RNA: YDL165W

CDC36, Transcript of Component of the CCR4-NOT core complex, yeastyeast

Gene CDC36, Length 576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC36YDL165W YVC1Q12324 675 aa3.92□□□□□ -1.78
CDC36YDL165W HTS1P07263 546 aaKnown RBP3.91□□□□□ -1.78
CDC36YDL165W RIM8P53179 542 aa3.91□□□□□ -1.78
CDC36YDL165W MRPL22P53881 309 aa3.91□□□□□ -1.78
CDC36YDL165W YDL177CQ12257 170 aa3.91□□□□□ -1.78
CDC36YDL165W LSO1Q3E827 93 aa3.91□□□□□ -1.78
CDC36YDL165W COBP00163 385 aa3.9□□□□□ -1.79
CDC36YDL165W MEC3Q02574 474 aa3.9□□□□□ -1.79
CDC36YDL165W ALG6Q12001 544 aaKnown RBP3.9□□□□□ -1.79
CDC36YDL165W RIM11P38615 370 aa3.89□□□□□ -1.79
CDC36YDL165W PTC7P38797 343 aa3.89□□□□□ -1.79
CDC36YDL165W YML083CQ04526 418 aa3.89□□□□□ -1.79
CDC36YDL165W GSF2Q04697 403 aaKnown RBP3.89□□□□□ -1.79
CDC36YDL165W CMR1Q12510 522 aaKnown RBP3.89□□□□□ -1.79
CDC36YDL165W NPR1P22211 790 aa3.88□□□□□ -1.79
CDC36YDL165W NFS1P25374 497 aa3.88□□□□□ -1.79
CDC36YDL165W PRP5P21372 849 aaPredicted RBP3.87□□□□□ -1.79
CDC36YDL165W DUR3P33413 735 aa3.87□□□□□ -1.79
CDC36YDL165W TOD6P34219 525 aa3.87□□□□□ -1.79
CDC36YDL165W REI1P38344 393 aaPredicted RBP3.87□□□□□ -1.79
CDC36YDL165W GTS1P40956 396 aa3.87□□□□□ -1.79
CDC36YDL165W SOD2P00447 233 aa3.86□□□□□ -1.79
CDC36YDL165W SMY2P32909 740 aaKnown RBP3.86□□□□□ -1.79
CDC36YDL165W ETP1P38748 585 aaKnown RBP3.86□□□□□ -1.79
CDC36YDL165W UTP22P53254 1237 aaPredicted RBP3.86□□□□□ -1.79
CDC36YDL165W ELA1P53861 379 aaPredicted RBP3.86□□□□□ -1.79
CDC36YDL165W YPL277CQ08989 487 aa3.86□□□□□ -1.79
CDC36YDL165W TAD3Q9URQ3 322 aa3.86□□□□□ -1.79
CDC36YDL165W ABZ1P37254 787 aaPredicted RBP3.85□□□□□ -1.79
CDC36YDL165W YGR045CP53229 120 aa3.85□□□□□ -1.79
CDC36YDL165W NOB1Q08444 459 aaKnown RBP3.84□□□□□ -1.79
CDC36YDL165W FUR4P05316 633 aaKnown RBP3.83□□□□□ -1.8
CDC36YDL165W RPS13P05756 151 aaKnown RBP3.83□□□□□ -1.8
CDC36YDL165W NNK1P36003 928 aa3.83□□□□□ -1.8
CDC36YDL165W BOL3P39724 118 aa3.83□□□□□ -1.8
CDC36YDL165W CLU1Q03690 1277 aaKnown RBP3.83□□□□□ -1.8
CDC36YDL165W SHM2P37291 469 aaKnown RBP3.82□□□□□ -1.8
CDC36YDL165W ECM2P38241 364 aaKnown RBP3.82□□□□□ -1.8
CDC36YDL165W RSC4Q02206 625 aa3.82□□□□□ -1.8
CDC36YDL165W CTS1P29029 562 aa3.81□□□□□ -1.8
CDC36YDL165W AVO1Q08236 1176 aa3.81□□□□□ -1.8
CDC36YDL165W PUS7Q08647 676 aaKnown RBP3.81□□□□□ -1.8
CDC36YDL165W TUB2P02557 457 aaKnown RBP3.8□□□□□ -1.8
CDC36YDL165W TY1A-LR4P0C2I8 440 aaKnown RBP3.8□□□□□ -1.8
CDC36YDL165W TY1A-DR6P0CX70 440 aa3.8□□□□□ -1.8
CDC36YDL165W TY1A-ER1P0CX71 440 aa3.8□□□□□ -1.8
CDC36YDL165W TY1A-LR2P0CX72 440 aa3.8□□□□□ -1.8
CDC36YDL165W TY1A-PLP0CX73 440 aa3.8□□□□□ -1.8
CDC36YDL165W TY1A-JR1P0CX74 440 aa3.8□□□□□ -1.8
CDC36YDL165W TY1A-LR3P0CX75 440 aa3.8□□□□□ -1.8
CDC36YDL165W TY1A-ML2P0CX76 440 aa3.8□□□□□ -1.8
CDC36YDL165W SNO2P53823 222 aa3.8□□□□□ -1.8
CDC36YDL165W TPP1Q03796 238 aa3.8□□□□□ -1.8
CDC36YDL165W TY1A-GR1Q12085 440 aa3.8□□□□□ -1.8
CDC36YDL165W TY1A-PR3Q6Q5H1 440 aaKnown RBP3.8□□□□□ -1.8
CDC36YDL165W TY1A-OLQ92392 440 aaKnown RBP3.8□□□□□ -1.8
CDC36YDL165W YLR358CO13565 187 aa3.79□□□□□ -1.8
CDC36YDL165W PRE10P21242 288 aaKnown RBP RIP-Chip data3.79□□□□□ -1.8not detected
CDC36YDL165W ARL1P38116 183 aaKnown RBP3.79□□□□□ -1.8
CDC36YDL165W SAP155P43612 1002 aa3.79□□□□□ -1.8
CDC36YDL165W PNS1Q12412 539 aa3.79□□□□□ -1.8
CDC36YDL165W SAM35P14693 329 aa3.77□□□□□ -1.81
CDC36YDL165W SSA4P22202 642 aaKnown RBP3.77□□□□□ -1.81
CDC36YDL165W YPT53P36019 220 aa3.77□□□□□ -1.81
CDC36YDL165W YHL012WP38709 493 aa3.77□□□□□ -1.81
CDC36YDL165W FOL2P51601 243 aaKnown RBP3.77□□□□□ -1.81
CDC36YDL165W YAF9P53930 226 aa3.76□□□□□ -1.81
CDC36YDL165W UFD2P54860 961 aa3.76□□□□□ -1.81
CDC36YDL165W MDL2P33311 773 aa3.75□□□□□ -1.81
CDC36YDL165W NMD3P38861 518 aaKnown RBP3.75□□□□□ -1.81
CDC36YDL165W SLS1P42900 643 aa3.75□□□□□ -1.81
CDC36YDL165W NUT1P53114 1132 aa3.75□□□□□ -1.81
CDC36YDL165W YDR132CQ03900 495 aa3.75□□□□□ -1.81
CDC36YDL165W PMT7Q06644 662 aa3.75□□□□□ -1.81
CDC36YDL165W FLP1P03870 423 aa3.74□□□□□ -1.81
CDC36YDL165W RET1P22276 1149 aaKnown RBP3.73□□□□□ -1.81
CDC36YDL165W AIM26P32858 118 aa3.73□□□□□ -1.81
CDC36YDL165W EXO5P38289 585 aa3.73□□□□□ -1.81
CDC36YDL165W TAT2P38967 592 aa3.73□□□□□ -1.81
CDC36YDL165W MPT5P39016 859 aaKnown RBP RIP-Chip data3.73□□□□□ -1.81not detected
CDC36YDL165W YLR257WQ06146 321 aaKnown RBP3.73□□□□□ -1.81
CDC36YDL165W MCM5P29496 775 aaKnown RBP3.72□□□□□ -1.81
CDC36YDL165W YKL077WP36081 392 aa3.72□□□□□ -1.81
CDC36YDL165W GLO3P38682 493 aaKnown RBP3.72□□□□□ -1.81
CDC36YDL165W NEM1P38757 446 aa3.72□□□□□ -1.81
CDC36YDL165W YAR028WP39548 234 aa3.72□□□□□ -1.81
CDC36YDL165W DMA2P53924 522 aa3.72□□□□□ -1.81
CDC36YDL165W YNL011CP53980 444 aa3.72□□□□□ -1.81
CDC36YDL165W BSC2Q05611 235 aa3.72□□□□□ -1.81
CDC36YDL165W QDR1P40475 563 aa3.71□□□□□ -1.82
CDC36YDL165W SPT20P50875 604 aa3.71□□□□□ -1.82
CDC36YDL165W PUS9Q12069 462 aa3.71□□□□□ -1.82
CDC36YDL165W SRO9P25567 434 aaKnown RBP3.7□□□□□ -1.82
CDC36YDL165W SLI1P53304 468 aa3.7□□□□□ -1.82
CDC36YDL165W RSA3Q05942 220 aaKnown RBP3.7□□□□□ -1.82
CDC36YDL165W MNL2Q12205 849 aa3.7□□□□□ -1.82
CDC36YDL165W TRM2P33753 639 aa3.69□□□□□ -1.82
CDC36YDL165W LAM1P38851 1228 aa3.69□□□□□ -1.82
CDC36YDL165W RVS167P39743 482 aaKnown RBP3.69□□□□□ -1.82
CDC36YDL165W MON1P53129 644 aa3.69□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 15.6 ms