RNA–Protein interactions for RNA: YCR021C

HSP30, Transcript of Negative regulator of the H(+)-ATPase Pma1p, yeast

Gene HSP30, Length 999 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HSP30	YCR021C	STE20	Q03497	939 aa	Known RBP	4.93	□□□□□ -1.62
HSP30	YCR021C	BDS1	Q08347	646 aa		4.93	□□□□□ -1.62
HSP30	YCR021C	HAT1	Q12341	374 aa		4.93	□□□□□ -1.62
HSP30	YCR021C	PMD1	P32634	1753 aa		4.93	□□□□□ -1.62
HSP30	YCR021C	UTP10	P42945	1769 aa	Known RBP	4.93	□□□□□ -1.62
HSP30	YCR021C	SSK22	P25390	1331 aa	Predicted RBP	4.93	□□□□□ -1.62
HSP30	YCR021C	GCD7	P32502	381 aa	Predicted RBP	4.92	□□□□□ -1.62
HSP30	YCR021C	SPL2	P38839	148 aa		4.92	□□□□□ -1.62
HSP30	YCR021C	YJR098C	P47139	656 aa		4.92	□□□□□ -1.62
HSP30	YCR021C	RPT4	P53549	437 aa	Known RBP	4.92	□□□□□ -1.62
HSP30	YCR021C	UBP2	Q01476	1272 aa		4.92	□□□□□ -1.62
HSP30	YCR021C	RAT1	Q02792	1006 aa	Known RBP	4.92	□□□□□ -1.62
HSP30	YCR021C	TOS4	Q06266	489 aa		4.92	□□□□□ -1.62
HSP30	YCR021C	FRA1	Q07825	749 aa		4.92	□□□□□ -1.62
HSP30	YCR021C	STE6	P12866	1290 aa		4.91	□□□□□ -1.62
HSP30	YCR021C	YDJ1	P25491	409 aa	Known RBP	4.91	□□□□□ -1.62
HSP30	YCR021C	ICL1	P28240	557 aa	Predicted RBP	4.91	□□□□□ -1.62
HSP30	YCR021C	MGM1	P32266	881 aa		4.91	□□□□□ -1.62
HSP30	YCR021C	ISF1	P32488	338 aa		4.91	□□□□□ -1.62
HSP30	YCR021C	FBP26	P32604	452 aa		4.91	□□□□□ -1.62
HSP30	YCR021C	ERT1	P38140	529 aa		4.91	□□□□□ -1.62
HSP30	YCR021C	NMD2	P38798	1089 aa	Known RBP	4.91	□□□□□ -1.62
HSP30	YCR021C	YNL193W	P53870	558 aa		4.91	□□□□□ -1.62
HSP30	YCR021C	RPN7	Q06103	429 aa	Known RBP	4.91	□□□□□ -1.62
HSP30	YCR021C	THI3	Q07471	609 aa		4.91	□□□□□ -1.62
HSP30	YCR021C	ATG20	Q07528	640 aa		4.91	□□□□□ -1.62
HSP30	YCR021C	TOP1	P04786	769 aa		4.9	□□□□□ -1.63
HSP30	YCR021C	SEC18	P18759	758 aa	Known RBP	4.9	□□□□□ -1.63
HSP30	YCR021C	RPT3	P33298	428 aa	Known RBP	4.9	□□□□□ -1.63
HSP30	YCR021C	YIR007W	P40566	764 aa		4.9	□□□□□ -1.63
HSP30	YCR021C	EMP47	P43555	445 aa		4.9	□□□□□ -1.63
HSP30	YCR021C	PIB2	P53191	635 aa		4.9	□□□□□ -1.63
HSP30	YCR021C	DMA2	P53924	522 aa		4.9	□□□□□ -1.63
HSP30	YCR021C	SYF1	Q04048	859 aa	Predicted RBP	4.9	□□□□□ -1.63
HSP30	YCR021C	NKP2	Q06162	153 aa		4.9	□□□□□ -1.63
HSP30	YCR021C	IRC3	Q06683	689 aa		4.9	□□□□□ -1.63
HSP30	YCR021C	GAS5	Q08193	484 aa		4.9	□□□□□ -1.63
HSP30	YCR021C	RET1	P22276	1149 aa	Known RBP	4.89	□□□□□ -1.63
HSP30	YCR021C	SPT5	P27692	1063 aa	Known RBP	4.89	□□□□□ -1.63
HSP30	YCR021C	PFF1	P38244	976 aa		4.89	□□□□□ -1.63
HSP30	YCR021C	ICP55	P40051	511 aa		4.89	□□□□□ -1.63
HSP30	YCR021C	GSM1	P42950	618 aa		4.89	□□□□□ -1.63
HSP30	YCR021C	ALO1	P54783	526 aa	Known RBP	4.89	□□□□□ -1.63
HSP30	YCR021C	ISU1	Q03020	165 aa		4.89	□□□□□ -1.63
HSP30	YCR021C	ERO1	Q03103	563 aa		4.89	□□□□□ -1.63
HSP30	YCR021C	NOT3	P06102	836 aa	Known RBP	4.88	□□□□□ -1.63
HSP30	YCR021C	RFC1	P38630	861 aa	Known RBP	4.88	□□□□□ -1.63
HSP30	YCR021C	YER156C	P40093	338 aa	Known RBP	4.88	□□□□□ -1.63
HSP30	YCR021C	YIR042C	P40586	236 aa		4.88	□□□□□ -1.63
HSP30	YCR021C	IRC4	Q03036	179 aa		4.88	□□□□□ -1.63
HSP30	YCR021C	MCM16	Q12262	181 aa		4.88	□□□□□ -1.63
HSP30	YCR021C	SNU66	Q12420	587 aa	Predicted RBP	4.88	□□□□□ -1.63
HSP30	YCR021C	CTT1	P06115	562 aa		4.87	□□□□□ -1.63
HSP30	YCR021C	LCB1	P25045	558 aa	Known RBP	4.87	□□□□□ -1.63
HSP30	YCR021C	KRE2	P27809	442 aa		4.87	□□□□□ -1.63
HSP30	YCR021C	YKL222C	P35995	705 aa		4.87	□□□□□ -1.63
HSP30	YCR021C	OSH7	P38755	437 aa		4.87	□□□□□ -1.63
HSP30	YCR021C	HAL5	P38970	855 aa	Known RBP	4.87	□□□□□ -1.63
HSP30	YCR021C	APL6	P46682	809 aa		4.87	□□□□□ -1.63
HSP30	YCR021C	SQS1	P53866	767 aa	Known RBP	4.87	□□□□□ -1.63
HSP30	YCR021C	MTC5	Q03897	1148 aa		4.87	□□□□□ -1.63
HSP30	YCR021C	DPH6	Q12429	685 aa		4.87	□□□□□ -1.63
HSP30	YCR021C	SAC3	P46674	1301 aa		4.87	□□□□□ -1.63
HSP30	YCR021C	FLO11	P08640	1367 aa		4.87	□□□□□ -1.63
HSP30	YCR021C	RPC31	P17890	251 aa		4.86	□□□□□ -1.63
HSP30	YCR021C	ECM21	P38167	1117 aa	Known RBP	4.86	□□□□□ -1.63
HSP30	YCR021C	FPR3	P38911	411 aa	Known RBP	4.86	□□□□□ -1.63
HSP30	YCR021C	VTC4	P47075	721 aa		4.86	□□□□□ -1.63
HSP30	YCR021C	YGL242C	P53066	181 aa		4.86	□□□□□ -1.63
HSP30	YCR021C	MRPS35	P53292	345 aa		4.86	□□□□□ -1.63
HSP30	YCR021C	HXT17	P53631	564 aa		4.86	□□□□□ -1.63
HSP30	YCR021C	NSG2	P53898	299 aa		4.86	□□□□□ -1.63
HSP30	YCR021C	INM2	Q05533	292 aa		4.86	□□□□□ -1.63
HSP30	YCR021C	ISR1	Q06098	443 aa	Known RBP	4.86	□□□□□ -1.63
HSP30	YCR021C	ADR1	P07248	1323 aa		4.86	□□□□□ -1.63
HSP30	YCR021C	STV1	P37296	890 aa		4.85	□□□□□ -1.63
HSP30	YCR021C	GLO3	P38682	493 aa	Known RBP	4.85	□□□□□ -1.63
HSP30	YCR021C	HXT13	P39924	564 aa		4.85	□□□□□ -1.63
HSP30	YCR021C	YMR147W	P40218	223 aa	Known RBP	4.85	□□□□□ -1.63
HSP30	YCR021C	YNL108C	P53929	270 aa		4.85	□□□□□ -1.63
HSP30	YCR021C	DIB1	Q06819	143 aa	Predicted RBP	4.85	□□□□□ -1.63
HSP30	YCR021C	POM152	P39685	1337 aa		4.85	□□□□□ -1.63
HSP30	YCR021C	PDR18	P53756	1333 aa		4.85	□□□□□ -1.63
HSP30	YCR021C	DAT1	P13483	248 aa	Known RBP	4.84	□□□□□ -1.63
HSP30	YCR021C	TRK2	P28584	889 aa		4.84	□□□□□ -1.63
HSP30	YCR021C	BIO2	P32451	375 aa		4.84	□□□□□ -1.63
HSP30	YCR021C	YKU70	P32807	602 aa		4.84	□□□□□ -1.63
HSP30	YCR021C	GRX7	P38068	203 aa		4.84	□□□□□ -1.63
HSP30	YCR021C	BRN1	P38170	754 aa		4.84	□□□□□ -1.63
HSP30	YCR021C	ROG3	P43602	733 aa		4.84	□□□□□ -1.63
HSP30	YCR021C	VPS4	P52917	437 aa		4.84	□□□□□ -1.63
HSP30	YCR021C	YGR035C	P53222	116 aa		4.84	□□□□□ -1.63
HSP30	YCR021C	TY1A-MR1	Q04215	440 aa		4.84	□□□□□ -1.63
HSP30	YCR021C	HPF1	Q05164	967 aa		4.84	□□□□□ -1.63
HSP30	YCR021C	RRI2	Q12348	645 aa		4.84	□□□□□ -1.63
HSP30	YCR021C	CCP1	P00431	361 aa		4.83	□□□□□ -1.64
HSP30	YCR021C	RPP2B	P02400	110 aa	Known RBP	4.83	□□□□□ -1.64
HSP30	YCR021C	SPT2	P06843	333 aa	Predicted RBP	4.83	□□□□□ -1.64
HSP30	YCR021C	CDC16	P09798	840 aa		4.83	□□□□□ -1.64
HSP30	YCR021C	AFG2	P32794	780 aa		4.83	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 50.7 ms