RNA–Protein interactions for RNA: YAL043C

PTA1, Transcript of Subunit of holo-CPF, yeastyeast

Gene PTA1, Length 2,358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTA1YAL043C YLR326WQ06170 240 aaKnown RBP4.59□□□□□ -1.67
PTA1YAL043C SUP35P05453 685 aaKnown RBP4.58□□□□□ -1.68
PTA1YAL043C MATALPHA2P0CY08 210 aa4.58□□□□□ -1.68
PTA1YAL043C HMLALPHA2P0CY09 210 aa4.58□□□□□ -1.68
PTA1YAL043C DIT2P21595 489 aa4.58□□□□□ -1.68
PTA1YAL043C ELM1P32801 640 aa4.58□□□□□ -1.68
PTA1YAL043C SWE1P32944 819 aa4.58□□□□□ -1.68
PTA1YAL043C RER2P35196 286 aa4.58□□□□□ -1.68
PTA1YAL043C YHL017WP38745 532 aa4.58□□□□□ -1.68
PTA1YAL043C SEC9P40357 651 aa4.58□□□□□ -1.68
PTA1YAL043C ARH1P48360 493 aa4.58□□□□□ -1.68
PTA1YAL043C LSC2P53312 427 aa4.58□□□□□ -1.68
PTA1YAL043C FOX2Q02207 900 aaKnown RBP4.58□□□□□ -1.68
PTA1YAL043C GIS4Q04233 774 aa4.58□□□□□ -1.68
PTA1YAL043C YDR344CQ05510 147 aa4.58□□□□□ -1.68
PTA1YAL043C THI3Q07471 609 aa4.58□□□□□ -1.68
PTA1YAL043C YPL150WQ12152 901 aa4.58□□□□□ -1.68
PTA1YAL043C HIF1Q12373 385 aa4.58□□□□□ -1.68
PTA1YAL043C ACE2P21192 770 aa4.58□□□□□ -1.68
PTA1YAL043C GRX7P38068 203 aa4.58□□□□□ -1.68
PTA1YAL043C EST2Q06163 884 aa4.58□□□□□ -1.68
PTA1YAL043C ETT1Q08421 412 aaKnown RBP4.58□□□□□ -1.68
PTA1YAL043C COQ1P18900 473 aa4.57□□□□□ -1.68
PTA1YAL043C RAD54P32863 898 aa4.57□□□□□ -1.68
PTA1YAL043C REI1P38344 393 aaPredicted RBP4.57□□□□□ -1.68
PTA1YAL043C HAL5P38970 855 aaKnown RBP4.57□□□□□ -1.68
PTA1YAL043C REF2P42073 533 aaPredicted RBP4.57□□□□□ -1.68
PTA1YAL043C UFD2P54860 961 aa4.57□□□□□ -1.68
PTA1YAL043C PKH3Q03306 898 aaPredicted RBP4.57□□□□□ -1.68
PTA1YAL043C RBA50Q04418 439 aa4.57□□□□□ -1.68
PTA1YAL043C IMH1Q06704 911 aaKnown RBP4.57□□□□□ -1.68
PTA1YAL043C YLR001CQ07895 862 aa4.57□□□□□ -1.68
PTA1YAL043C PSK2Q08217 1101 aa4.57□□□□□ -1.68
PTA1YAL043C PPM2Q08282 695 aa4.57□□□□□ -1.68
PTA1YAL043C GIN4Q12263 1142 aa4.57□□□□□ -1.68
PTA1YAL043C RPS6AP0CX37 236 aaKnown RBP4.57□□□□□ -1.68
PTA1YAL043C RPS6BP0CX38 236 aaPredicted RBP4.57□□□□□ -1.68
PTA1YAL043C SSA2P10592 639 aaKnown RBP4.57□□□□□ -1.68
PTA1YAL043C PSO2P30620 661 aa4.57□□□□□ -1.68
PTA1YAL043C RPC25P35718 212 aa4.57□□□□□ -1.68
PTA1YAL043C GSM1P42950 618 aa4.57□□□□□ -1.68
PTA1YAL043C YJR008WP47085 338 aa4.57□□□□□ -1.68
PTA1YAL043C STR2P47164 639 aa4.57□□□□□ -1.68
PTA1YAL043C YPT11P48559 417 aa4.57□□□□□ -1.68
PTA1YAL043C APT1P49435 187 aaKnown RBP4.57□□□□□ -1.68
PTA1YAL043C MPC54Q08550 464 aa4.57□□□□□ -1.68
PTA1YAL043C DCS2Q12123 353 aa4.57□□□□□ -1.68
PTA1YAL043C YKL068W-AQ3E826 78 aa4.57□□□□□ -1.68
PTA1YAL043C CDC37P06101 506 aaKnown RBP4.56□□□□□ -1.68
PTA1YAL043C STO1P34160 861 aaKnown RBP4.56□□□□□ -1.68
PTA1YAL043C MET1P36150 593 aa4.56□□□□□ -1.68
PTA1YAL043C RPN1P38764 993 aaKnown RBP4.56□□□□□ -1.68
PTA1YAL043C BRL1P38770 471 aa4.56□□□□□ -1.68
PTA1YAL043C IRC8P47046 822 aa4.56□□□□□ -1.68
PTA1YAL043C HCR1Q05775 265 aaKnown RBP4.56□□□□□ -1.68
PTA1YAL043C YLR407WQ06070 228 aa4.56□□□□□ -1.68
PTA1YAL043C YOL075CQ08234 1294 aa4.56□□□□□ -1.68
PTA1YAL043C TAF13P11747 167 aa4.56□□□□□ -1.68
PTA1YAL043C CLB1P24868 471 aa4.56□□□□□ -1.68
PTA1YAL043C URA1P28272 314 aaPredicted RBP4.56□□□□□ -1.68
PTA1YAL043C MDL2P33311 773 aa4.56□□□□□ -1.68
PTA1YAL043C MPE1P35728 441 aaKnown RBP4.56□□□□□ -1.68
PTA1YAL043C KIC1P38692 1080 aa4.56□□□□□ -1.68
PTA1YAL043C RPN11P43588 306 aaKnown RBP4.56□□□□□ -1.68
PTA1YAL043C ENP2P48234 707 aaKnown RBP4.56□□□□□ -1.68
PTA1YAL043C VPS60Q03390 229 aa4.56□□□□□ -1.68
PTA1YAL043C MRD1Q06106 887 aaKnown RBP4.56□□□□□ -1.68
PTA1YAL043C ATG9Q12142 997 aa4.56□□□□□ -1.68
PTA1YAL043C STI1P15705 589 aaKnown RBP RIP-Chip data4.55□□□□□ -1.68not detected
PTA1YAL043C SWI4P25302 1093 aaKnown RBP4.55□□□□□ -1.68
PTA1YAL043C MGM1P32266 881 aa4.55□□□□□ -1.68
PTA1YAL043C BCK2P33306 851 aa4.55□□□□□ -1.68
PTA1YAL043C YET1P35723 206 aa4.55□□□□□ -1.68
PTA1YAL043C YKR075CP36155 307 aa4.55□□□□□ -1.68
PTA1YAL043C SHM1P37292 490 aaPredicted RBP4.55□□□□□ -1.68
PTA1YAL043C ATG36P46983 293 aa4.55□□□□□ -1.68
PTA1YAL043C GYL1Q04322 720 aa4.55□□□□□ -1.68
PTA1YAL043C DPL1Q05567 589 aa4.55□□□□□ -1.68
PTA1YAL043C SMD2Q06217 110 aaKnown RBP4.55□□□□□ -1.68
PTA1YAL043C TFC6Q06339 672 aa4.55□□□□□ -1.68
PTA1YAL043C PLP2Q12017 286 aa4.55□□□□□ -1.68
PTA1YAL043C RRP6Q12149 733 aaKnown RBP4.55□□□□□ -1.68
PTA1YAL043C MCM16Q12262 181 aa4.55□□□□□ -1.68
PTA1YAL043C YOR111WQ99210 232 aa4.55□□□□□ -1.68
PTA1YAL043C TUF1P02992 437 aaKnown RBP4.55□□□□□ -1.68
PTA1YAL043C SPT2P06843 333 aaPredicted RBP4.55□□□□□ -1.68
PTA1YAL043C SLD2P34252 453 aa4.55□□□□□ -1.68
PTA1YAL043C PCS60P38137 543 aaKnown RBP RIP-Chip data4.55□□□□□ -1.68not detected
PTA1YAL043C TCD1P38756 429 aa4.55□□□□□ -1.68
PTA1YAL043C CAJ1P39101 391 aa4.55□□□□□ -1.68
PTA1YAL043C CSM2P40465 213 aa4.55□□□□□ -1.68
PTA1YAL043C VPS75P53853 264 aa4.55□□□□□ -1.68
PTA1YAL043C MTC5Q03897 1148 aa4.55□□□□□ -1.68
PTA1YAL043C COG4Q06096 861 aa4.55□□□□□ -1.68
PTA1YAL043C SPN1Q06505 410 aaPredicted RBP4.55□□□□□ -1.68
PTA1YAL043C TAH18Q12181 623 aa4.55□□□□□ -1.68
PTA1YAL043C PHM7Q12252 991 aa4.55□□□□□ -1.68
PTA1YAL043C OPI1P21957 404 aa4.54□□□□□ -1.68
PTA1YAL043C GRX1P25373 110 aaKnown RBP4.54□□□□□ -1.68
PTA1YAL043C DEP1P31385 405 aa4.54□□□□□ -1.68
Retrieved 100 of 5,963 RNA–protein pairs in 28.5 ms