RNA–Protein interactions for RNA: ENST00000511241.5

LINC01088-207, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 2

Gene LINC01088, Length 679 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-207ENST00000511241 ALG2Q9H553 416 aa13.05□□□□□ -0.32
LINC01088-207ENST00000511241 PLA2G2EQ9NZK7 142 aa13.05□□□□□ -0.32
LINC01088-207ENST00000511241 ARHGEF11O15085 1522 aa13.04□□□□□ -0.32
LINC01088-207ENST00000511241 SEMA3FQ13275 785 aa13.04□□□□□ -0.32
LINC01088-207ENST00000511241 PLA2G2CQ5R387 149 aa13.04□□□□□ -0.32
LINC01088-207ENST00000511241 CCDC97Q96F63 343 aaPredicted RBP13.04□□□□□ -0.32
LINC01088-207ENST00000511241 CHD1O14646 1710 aa13.03□□□□□ -0.32
LINC01088-207ENST00000511241 TRIM32Q13049 653 aa13.03□□□□□ -0.32
LINC01088-207ENST00000511241 SH3RF1Q7Z6J0 888 aa13.03□□□□□ -0.32
LINC01088-207ENST00000511241 CD2BP2O95400 341 aaKnown RBP13.02□□□□□ -0.33
LINC01088-207ENST00000511241 LINC01559Q495D7 138 aa13.02□□□□□ -0.33
LINC01088-207ENST00000511241 ZBTB33Q86T24 672 aa13.02□□□□□ -0.33
LINC01088-207ENST00000511241 CCDC82Q8N4S0 544 aa13.02□□□□□ -0.33
LINC01088-207ENST00000511241 OCSTAMPQ9BR26 566 aa13.02□□□□□ -0.33
LINC01088-207ENST00000511241 SNAPC4Q5SXM2 1469 aa13.02□□□□□ -0.33
LINC01088-207ENST00000511241 WNT7BP56706 349 aa13.01□□□□□ -0.33
LINC01088-207ENST00000511241 SH3BP2P78314 561 aa13.01□□□□□ -0.33
LINC01088-207ENST00000511241 ADAMTS19Q8TE59 1207 aa13.01□□□□□ -0.33
LINC01088-207ENST00000511241 AGERQ15109 404 aa13□□□□□ -0.33
LINC01088-207ENST00000511241 CYB5RLQ6IPT4 315 aa13□□□□□ -0.33
LINC01088-207ENST00000511241 ADAM32Q8TC27 787 aa13□□□□□ -0.33
LINC01088-207ENST00000511241 A0A0G2JS52 829 aa12.98□□□□□ -0.33
LINC01088-207ENST00000511241 FOXJ1Q92949 421 aa12.98□□□□□ -0.33
LINC01088-207ENST00000511241 MAGEB6P1A0A0J9YX57 407 aa12.96□□□□□ -0.33
LINC01088-207ENST00000511241 LIAT1Q6ZQX7 453 aa12.96□□□□□ -0.33
LINC01088-207ENST00000511241 ARID3AQ99856 593 aa12.96□□□□□ -0.33
LINC01088-207ENST00000511241 PCDHB9Q9Y5E1 797 aa12.96□□□□□ -0.33
LINC01088-207ENST00000511241 ARAP1Q96P48 1450 aa12.96□□□□□ -0.34
LINC01088-207ENST00000511241 CHMP7Q8WUX9 453 aaPredicted RBP12.95□□□□□ -0.34
LINC01088-207ENST00000511241 CARD14Q9BXL6 1004 aa12.95□□□□□ -0.34
LINC01088-207ENST00000511241 GRIN2BQ13224 1484 aa12.95□□□□□ -0.34
LINC01088-207ENST00000511241 VARSP26640 1264 aaKnown RBP12.94□□□□□ -0.34
LINC01088-207ENST00000511241 SLC19A1P41440 591 aa12.94□□□□□ -0.34
LINC01088-207ENST00000511241 ERFEQ4G0M1 354 aa12.94□□□□□ -0.34
LINC01088-207ENST00000511241 C4orf48Q5BLP8 95 aa12.94□□□□□ -0.34
LINC01088-207ENST00000511241 DZIP3Q86Y13 1208 aaKnown RBP12.94□□□□□ -0.34
LINC01088-207ENST00000511241 C1QTNF2Q9BXJ5 285 aa12.94□□□□□ -0.34
LINC01088-207ENST00000511241 WDR97A6NE52 1622 aa12.93□□□□□ -0.34
LINC01088-207ENST00000511241 SKOR1P84550 965 aa12.93□□□□□ -0.34
LINC01088-207ENST00000511241 TRMT44Q8IYL2 757 aaKnown RBP12.93□□□□□ -0.34
LINC01088-207ENST00000511241 CDV3Q9UKY7 258 aaKnown RBP12.93□□□□□ -0.34
LINC01088-207ENST00000511241 GAPVD1Q14C86 1478 aa12.92□□□□□ -0.34
LINC01088-207ENST00000511241 EMID1Q96A84 441 aaPredicted RBP12.92□□□□□ -0.34
LINC01088-207ENST00000511241 CEP126Q9P2H0 1117 aa12.92□□□□□ -0.34
LINC01088-207ENST00000511241 MAGI1Q96QZ7 1491 aaPredicted RBP12.91□□□□□ -0.34
LINC01088-207ENST00000511241 FAM174AQ8TBP5 190 aa12.91□□□□□ -0.34
LINC01088-207ENST00000511241 SLC10A4Q96EP9 437 aa12.91□□□□□ -0.34
LINC01088-207ENST00000511241 CLASP1Q7Z460 1538 aa12.9□□□□□ -0.34
LINC01088-207ENST00000511241 ABCA10Q8WWZ4 1543 aa12.9□□□□□ -0.34
LINC01088-207ENST00000511241 RC3H1Q5TC82 1133 aaKnown RBP12.89□□□□□ -0.35
LINC01088-207ENST00000511241 NFATC2IPQ8NCF5 419 aa12.89□□□□□ -0.35
LINC01088-207ENST00000511241 EHBP1Q8NDI1 1231 aa12.89□□□□□ -0.35
LINC01088-207ENST00000511241 PPP1R12CQ9BZL4 782 aa12.89□□□□□ -0.35
LINC01088-207ENST00000511241 SYNJ2O15056 1496 aa12.89□□□□□ -0.35
LINC01088-207ENST00000511241 SPRYD7Q5W111 196 aa12.88□□□□□ -0.35
LINC01088-207ENST00000511241 UCN2Q96RP3 112 aa12.88□□□□□ -0.35
LINC01088-207ENST00000511241 SYNJ1O43426 1573 aa12.88□□□□□ -0.35
LINC01088-207ENST00000511241 ABCA5Q8WWZ7 1642 aa12.88□□□□□ -0.35
LINC01088-207ENST00000511241 SLFNL1Q499Z3 407 aa12.87□□□□□ -0.35
LINC01088-207ENST00000511241 ARXQ96QS3 562 aa12.87□□□□□ -0.35
LINC01088-207ENST00000511241 V9GY48 417 aaPredicted RBP12.87□□□□□ -0.35
LINC01088-207ENST00000511241 PBRM1Q86U86 1689 aa12.86□□□□□ -0.35
LINC01088-207ENST00000511241 PALM3A6NDB9 673 aaPredicted RBP12.86□□□□□ -0.35
LINC01088-207ENST00000511241 NBPF20Q3BBV1 942 aa12.86□□□□□ -0.35
LINC01088-207ENST00000511241 WRNQ14191 1432 aaPredicted RBP eCLIP12.86□□□□□ -0.35
LINC01088-207ENST00000511241 WNT7AO00755 349 aa12.85□□□□□ -0.35
LINC01088-207ENST00000511241 RNF20Q5VTR2 975 aa12.85□□□□□ -0.35
LINC01088-207ENST00000511241 ZNF598Q86UK7 904 aaKnown RBP12.85□□□□□ -0.35
LINC01088-207ENST00000511241 CCDC125Q86Z20 511 aa12.85□□□□□ -0.35
LINC01088-207ENST00000511241 PHTF2Q8N3S3 785 aa12.85□□□□□ -0.35
LINC01088-207ENST00000511241 MPNDQ8N594 471 aa12.85□□□□□ -0.35
LINC01088-207ENST00000511241 TFIP11Q9UBB9 837 aaKnown RBP12.85□□□□□ -0.35
LINC01088-207ENST00000511241 MAP4K5Q9Y4K4 846 aa12.85□□□□□ -0.35
LINC01088-207ENST00000511241 ATP9BO43861 1147 aa12.84□□□□□ -0.35
LINC01088-207ENST00000511241 PRKD2Q9BZL6 878 aa12.84□□□□□ -0.35
LINC01088-207ENST00000511241 TBC1D9Q6ZT07 1266 aa12.83□□□□□ -0.36
LINC01088-207ENST00000511241 RNF135Q8IUD6 432 aa12.83□□□□□ -0.36
LINC01088-207ENST00000511241 SEPT12Q8IYM1 358 aa12.83□□□□□ -0.36
LINC01088-207ENST00000511241 TOP2BQ02880 1626 aa12.83□□□□□ -0.36
LINC01088-207ENST00000511241 BIVM-ERCC5R4GMW8 1640 aa12.82□□□□□ -0.36
LINC01088-207ENST00000511241 CFAP70Q5T0N1 1121 aa12.82□□□□□ -0.36
LINC01088-207ENST00000511241 CDK15Q96Q40 435 aa12.82□□□□□ -0.36
LINC01088-207ENST00000511241 ESPNB1AK53 854 aa12.81□□□□□ -0.36
LINC01088-207ENST00000511241 SIAH2O43255 324 aa12.81□□□□□ -0.36
LINC01088-207ENST00000511241 LZTS3O60299 673 aaPredicted RBP12.81□□□□□ -0.36
LINC01088-207ENST00000511241 PPP1R15AO75807 674 aaPredicted RBP12.81□□□□□ -0.36
LINC01088-207ENST00000511241 ZNF697Q5TEC3 545 aa12.81□□□□□ -0.36
LINC01088-207ENST00000511241 CHIC2Q9UKJ5 165 aa12.81□□□□□ -0.36
LINC01088-207ENST00000511241 PIK3CDO00329 1044 aa12.8□□□□□ -0.36
LINC01088-207ENST00000511241 GIGYF1O75420 1035 aaPredicted RBP12.8□□□□□ -0.36
LINC01088-207ENST00000511241 SKIP12755 728 aa12.8□□□□□ -0.36
LINC01088-207ENST00000511241 LMOD1P29536 600 aaPredicted RBP12.8□□□□□ -0.36
LINC01088-207ENST00000511241 MAP7D1Q3KQU3 841 aa12.8□□□□□ -0.36
LINC01088-207ENST00000511241 VASH1Q7L8A9 365 aaPredicted RBP12.8□□□□□ -0.36
LINC01088-207ENST00000511241 KCTD15Q96SI1 283 aaPredicted RBP12.8□□□□□ -0.36
LINC01088-207ENST00000511241 MAFBQ9Y5Q3 323 aaPredicted RBP12.8□□□□□ -0.36
LINC01088-207ENST00000511241 GRIN2AQ12879 1464 aa12.79□□□□□ -0.36
LINC01088-207ENST00000511241 ERCC6L2Q5T890 1561 aa12.79□□□□□ -0.36
LINC01088-207ENST00000511241 ADAMTS12P58397 1594 aa12.78□□□□□ -0.36
LINC01088-207ENST00000511241 PLEKHM2Q8IWE5 1019 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms