RNA–Protein interactions for RNA: ENST00000492626.5

SNX13-209, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,956 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-209ENST00000492626 HOXB1P14653 301 aaPredicted RBP4.84□□□□□ -1.64
SNX13-209ENST00000492626 PCDHGC3Q9UN70 934 aa4.84□□□□□ -1.64
SNX13-209ENST00000492626 WDR7Q9Y4E6 1490 aa4.84□□□□□ -1.64
SNX13-209ENST00000492626 SLC10A3P09131 477 aa4.83□□□□□ -1.64
SNX13-209ENST00000492626 NR6A1Q15406 480 aa4.83□□□□□ -1.64
SNX13-209ENST00000492626 LRCH3Q96II8 777 aa4.83□□□□□ -1.64
SNX13-209ENST00000492626 AGLP35573 1532 aa4.83□□□□□ -1.64
SNX13-209ENST00000492626 SKIP12755 728 aa4.83□□□□□ -1.64
SNX13-209ENST00000492626 CFAP70Q5T0N1 1121 aa4.83□□□□□ -1.64
SNX13-209ENST00000492626 FOXD4L5Q5VV16 416 aaPredicted RBP4.83□□□□□ -1.64
SNX13-209ENST00000492626 FOXD4L4Q8WXT5 416 aaPredicted RBP4.83□□□□□ -1.64
SNX13-209ENST00000492626 TRIM34Q9BYJ4 488 aa4.83□□□□□ -1.64
SNX13-209ENST00000492626 ALG2Q9H553 416 aa4.83□□□□□ -1.64
SNX13-209ENST00000492626 ASXL2Q76L83 1435 aa4.83□□□□□ -1.64
SNX13-209ENST00000492626 ABCA8O94911 1581 aa4.83□□□□□ -1.64
SNX13-209ENST00000492626 SLFNL1Q499Z3 407 aa4.83□□□□□ -1.64
SNX13-209ENST00000492626 FBXO31Q5XUX0 539 aaPredicted RBP4.83□□□□□ -1.64
SNX13-209ENST00000492626 LAPTM4BQ86VI4 370 aa4.83□□□□□ -1.64
SNX13-209ENST00000492626 ARMC2Q8NEN0 867 aa4.83□□□□□ -1.64
SNX13-209ENST00000492626 NPATQ14207 1427 aa4.83□□□□□ -1.64
SNX13-209ENST00000492626 FGD5Q6ZNL6 1462 aa4.82□□□□□ -1.64
SNX13-209ENST00000492626 ZBBXA8MT70 800 aa4.82□□□□□ -1.64
SNX13-209ENST00000492626 CFAP99D6REC4 459 aa4.82□□□□□ -1.64
SNX13-209ENST00000492626 ARHGAP33O14559 1287 aa4.82□□□□□ -1.64
SNX13-209ENST00000492626 ATP9BO43861 1147 aa4.82□□□□□ -1.64
SNX13-209ENST00000492626 SAMD7Q7Z3H4 446 aa4.82□□□□□ -1.64
SNX13-209ENST00000492626 ZBED2Q9BTP6 218 aa4.82□□□□□ -1.64
SNX13-209ENST00000492626 WIZO95785 1651 aa4.82□□□□□ -1.64
SNX13-209ENST00000492626 BIVM-ERCC5R4GMW8 1640 aa4.82□□□□□ -1.64
SNX13-209ENST00000492626 MRPL50Q8N5N7 158 aaKnown RBP4.82□□□□□ -1.64
SNX13-209ENST00000492626 MAFBQ9Y5Q3 323 aaPredicted RBP4.82□□□□□ -1.64
SNX13-209ENST00000492626 HLA-CQ95604 372 aa4.82□□□□□ -1.64
SNX13-209ENST00000492626 ZC3H4Q9UPT8 1303 aaKnown RBP4.81□□□□□ -1.64
SNX13-209ENST00000492626 PBX2P40425 430 aa4.81□□□□□ -1.64
SNX13-209ENST00000492626 NCOA1Q15788 1441 aa4.81□□□□□ -1.64
SNX13-209ENST00000492626 RAPGEF6Q8TEU7 1601 aa4.81□□□□□ -1.64
SNX13-209ENST00000492626 SND1Q7KZF4 910 aaKnown RBP eCLIP4.81□□□□□ -1.64
SNX13-209ENST00000492626 MCCD1P59942 119 aaPredicted RBP4.81□□□□□ -1.64
SNX13-209ENST00000492626 CDKN2AIPQ9NXV6 580 aaPredicted RBP4.81□□□□□ -1.64
SNX13-209ENST00000492626 RICTORQ6R327 1708 aa4.81□□□□□ -1.64
SNX13-209ENST00000492626 CDK13Q14004 1512 aaKnown RBP4.81□□□□□ -1.64
SNX13-209ENST00000492626 LRRC9Q6ZRR7 1453 aa4.8□□□□□ -1.64
SNX13-209ENST00000492626 NR1I2O75469 434 aa4.8□□□□□ -1.64
SNX13-209ENST00000492626 DESI1Q6ICB0 168 aa4.8□□□□□ -1.64
SNX13-209ENST00000492626 RGS22Q8NE09 1264 aa4.8□□□□□ -1.64
SNX13-209ENST00000492626 ADAMTS19Q8TE59 1207 aa4.8□□□□□ -1.64
SNX13-209ENST00000492626 POTEIP0CG38 1075 aa4.8□□□□□ -1.64
SNX13-209ENST00000492626 ANKK1Q8NFD2 765 aa4.8□□□□□ -1.64
SNX13-209ENST00000492626 SYMPKQ92797 1274 aaKnown RBP4.8□□□□□ -1.64
SNX13-209ENST00000492626 PCDHB9Q9Y5E1 797 aa4.8□□□□□ -1.64
SNX13-209ENST00000492626 UHRF1BP1Q6BDS2 1440 aa4.8□□□□□ -1.64
SNX13-209ENST00000492626 AKNAQ7Z591 1439 aa4.8□□□□□ -1.64
SNX13-209ENST00000492626 CNTLNQ9NXG0 1405 aa4.8□□□□□ -1.64
SNX13-209ENST00000492626 PTK2Q05397 1052 aa4.8□□□□□ -1.64
SNX13-209ENST00000492626 FRMPD1Q5SYB0 1578 aa4.8□□□□□ -1.64
SNX13-209ENST00000492626 NBPF14Q5TI25 921 aa4.8□□□□□ -1.64
SNX13-209ENST00000492626 TBC1D9Q6ZT07 1266 aa4.8□□□□□ -1.64
SNX13-209ENST00000492626 RNF135Q8IUD6 432 aa4.8□□□□□ -1.64
SNX13-209ENST00000492626 SP7Q8TDD2 431 aaPredicted RBP4.8□□□□□ -1.64
SNX13-209ENST00000492626 COL17A1Q9UMD9 1497 aaPredicted RBP4.8□□□□□ -1.64
SNX13-209ENST00000492626 CARMIL2Q6F5E8 1435 aa4.8□□□□□ -1.64
SNX13-209ENST00000492626 C3orf80F5H4A9 247 aa4.8□□□□□ -1.64
SNX13-209ENST00000492626 FMNL1O95466 1100 aaPredicted RBP4.8□□□□□ -1.64
SNX13-209ENST00000492626 PSEN2P49810 448 aa4.8□□□□□ -1.64
SNX13-209ENST00000492626 FKBPLQ9UIM3 349 aa4.8□□□□□ -1.64
SNX13-209ENST00000492626 FHOD3Q2V2M9 1422 aa4.79□□□□□ -1.64
SNX13-209ENST00000492626 PPP4CP60510 307 aa4.79□□□□□ -1.64
SNX13-209ENST00000492626 TRIM50Q86XT4 487 aa4.79□□□□□ -1.64
SNX13-209ENST00000492626 NFATC2IPQ8NCF5 419 aa4.79□□□□□ -1.64
SNX13-209ENST00000492626 USB1Q9BQ65 265 aaKnown RBP4.79□□□□□ -1.64
SNX13-209ENST00000492626 SLC4A5Q9BY07 1137 aa4.79□□□□□ -1.64
SNX13-209ENST00000492626 POLR1AO95602 1720 aaPredicted RBP4.79□□□□□ -1.64
SNX13-209ENST00000492626 ACTN4O43707 911 aaKnown RBP4.79□□□□□ -1.64
SNX13-209ENST00000492626 ARID4AP29374 1257 aaPredicted RBP4.79□□□□□ -1.64
SNX13-209ENST00000492626 PUS10Q3MIT2 529 aaKnown RBP4.79□□□□□ -1.64
SNX13-209ENST00000492626 NOVA2Q9UNW9 492 aaKnown RBP4.79□□□□□ -1.64
SNX13-209ENST00000492626 AMOTL2Q9Y2J4 779 aa4.79□□□□□ -1.64
SNX13-209ENST00000492626 ATP5J2-PTCD1G3V325 749 aa4.79□□□□□ -1.64
SNX13-209ENST00000492626 RASA1P20936 1047 aa4.79□□□□□ -1.64
SNX13-209ENST00000492626 FAM200AQ8TCP9 573 aa4.79□□□□□ -1.64
SNX13-209ENST00000492626 ESF1Q9H501 851 aaKnown RBP4.79□□□□□ -1.64
SNX13-209ENST00000492626 BIN2Q9UBW5 565 aaPredicted RBP4.79□□□□□ -1.64
SNX13-209ENST00000492626 DEPDC5O75140 1603 aa4.78□□□□□ -1.64
SNX13-209ENST00000492626 TNIKQ9UKE5 1360 aa4.78□□□□□ -1.64
SNX13-209ENST00000492626 USP17L3A6NCW0 530 aa4.78□□□□□ -1.64
SNX13-209ENST00000492626 USP17L4A6NCW7 530 aa4.78□□□□□ -1.64
SNX13-209ENST00000492626 USP17L5A8MUK1 530 aa4.78□□□□□ -1.64
SNX13-209ENST00000492626 ATP1A2P50993 1020 aa4.78□□□□□ -1.64
SNX13-209ENST00000492626 USP17L2Q6R6M4 530 aa4.78□□□□□ -1.64
SNX13-209ENST00000492626 USP17L1Q7RTZ2 530 aa4.78□□□□□ -1.64
SNX13-209ENST00000492626 PCDHB3Q9Y5E6 796 aa4.78□□□□□ -1.64
SNX13-209ENST00000492626 LYPD8Q6UX82 237 aa4.78□□□□□ -1.64
SNX13-209ENST00000492626 EPS8L1Q8TE68 723 aa4.78□□□□□ -1.64
SNX13-209ENST00000492626 ZFRQ96KR1 1074 aaKnown RBP4.78□□□□□ -1.64
SNX13-209ENST00000492626 SLC27A5Q9Y2P5 690 aa4.78□□□□□ -1.64
SNX13-209ENST00000492626 LZTS3O60299 673 aaPredicted RBP4.78□□□□□ -1.64
SNX13-209ENST00000492626 ERCC3P19447 782 aa4.78□□□□□ -1.64
SNX13-209ENST00000492626 PSME1Q06323 249 aa4.78□□□□□ -1.64
SNX13-209ENST00000492626 MORN1Q5T089 497 aa4.78□□□□□ -1.64
SNX13-209ENST00000492626 GPKOWQ92917 476 aaPredicted RBP eCLIP4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms