RNA–Protein interactions for RNA: ENST00000302273.2

VPREB1-201, Transcript of V-set pre-B cell surrogate light chain 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene VPREB1, Length 626 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB1-201ENST00000302273 PHRF1Q9P1Y6 1649 aaKnown RBP11.93□□□□□ -0.5
VPREB1-201ENST00000302273 ERBB3P21860 1342 aa11.93□□□□□ -0.5
VPREB1-201ENST00000302273 WDR17Q8IZU2 1322 aa11.93□□□□□ -0.5
VPREB1-201ENST00000302273 COL14A1Q05707 1796 aaKnown RBP11.93□□□□□ -0.5
VPREB1-201ENST00000302273 SOX12O15370 315 aa11.93□□□□□ -0.5
VPREB1-201ENST00000302273 ANP32CO43423 234 aa11.93□□□□□ -0.5
VPREB1-201ENST00000302273 MTHFSP49914 203 aa11.93□□□□□ -0.5
VPREB1-201ENST00000302273 CFAP53Q96M91 514 aa11.93□□□□□ -0.5
VPREB1-201ENST00000302273 CDCA7Q9BWT1 371 aaPredicted RBP11.93□□□□□ -0.5
VPREB1-201ENST00000302273 PRKRIP1Q9H875 184 aaPredicted RBP11.93□□□□□ -0.5
VPREB1-201ENST00000302273 AXIN2Q9Y2T1 843 aa11.93□□□□□ -0.5
VPREB1-201ENST00000302273 PLEKHG2Q9H7P9 1386 aa11.92□□□□□ -0.5
VPREB1-201ENST00000302273 ONECUT3O60422 494 aaPredicted RBP11.92□□□□□ -0.5
VPREB1-201ENST00000302273 PLEKHG5O94827 1062 aa11.92□□□□□ -0.5
VPREB1-201ENST00000302273 PPP2R1AP30153 589 aa11.92□□□□□ -0.5
VPREB1-201ENST00000302273 RRS1Q15050 365 aaKnown RBP11.92□□□□□ -0.5
VPREB1-201ENST00000302273 CHRNA2Q15822 529 aa11.92□□□□□ -0.5
VPREB1-201ENST00000302273 CARD10Q9BWT7 1032 aa11.92□□□□□ -0.5
VPREB1-201ENST00000302273 MYBBP1AQ9BQG0 1328 aaKnown RBP11.91□□□□□ -0.5
VPREB1-201ENST00000302273 KIF20BQ96Q89 1820 aa11.91□□□□□ -0.5
VPREB1-201ENST00000302273 RBM6P78332 1123 aaKnown RBP11.91□□□□□ -0.5
VPREB1-201ENST00000302273 HSP90AB2PQ58FF8 381 aa11.91□□□□□ -0.5
VPREB1-201ENST00000302273 BARGINQ6ZT62 677 aa11.91□□□□□ -0.5
VPREB1-201ENST00000302273 GJD4Q96KN9 370 aaPredicted RBP11.91□□□□□ -0.5
VPREB1-201ENST00000302273 QTRT2Q9H974 415 aaKnown RBP11.91□□□□□ -0.5
VPREB1-201ENST00000302273 EMILIN1Q9Y6C2 1016 aa11.91□□□□□ -0.5
VPREB1-201ENST00000302273 SPATA31A5Q5VU36 1347 aa11.9□□□□□ -0.5
VPREB1-201ENST00000302273 SPATA31A7Q8IWB4 1347 aa11.9□□□□□ -0.5
VPREB1-201ENST00000302273 COL5A2P05997 1499 aaPredicted RBP11.9□□□□□ -0.5
VPREB1-201ENST00000302273 CDK12Q9NYV4 1490 aaPredicted RBP11.9□□□□□ -0.5
VPREB1-201ENST00000302273 PPM1GO15355 546 aaPredicted RBP11.9□□□□□ -0.5
VPREB1-201ENST00000302273 TNNT2P45379 298 aaPredicted RBP11.9□□□□□ -0.5
VPREB1-201ENST00000302273 CRB1P82279 1406 aa11.9□□□□□ -0.5
VPREB1-201ENST00000302273 ANKRD24Q8TF21 1146 aa11.9□□□□□ -0.5
VPREB1-201ENST00000302273 ABCA3Q99758 1704 aa11.9□□□□□ -0.5
VPREB1-201ENST00000302273 NUDCQ9Y266 331 aa11.9□□□□□ -0.5
VPREB1-201ENST00000302273 MARF1Q9Y4F3 1742 aaKnown RBP11.9□□□□□ -0.5
VPREB1-201ENST00000302273 CAMTA1Q9Y6Y1 1673 aa11.9□□□□□ -0.5
VPREB1-201ENST00000302273 SPATA31A1Q5TZJ5 1347 aa11.89□□□□□ -0.51
VPREB1-201ENST00000302273 NWD2Q9ULI1 1742 aa11.89□□□□□ -0.51
VPREB1-201ENST00000302273 ANKRD26Q9UPS8 1709 aa11.89□□□□□ -0.51
VPREB1-201ENST00000302273 ATRNO75882 1429 aa11.89□□□□□ -0.51
VPREB1-201ENST00000302273 CSB-PGBD3P0DP91 1061 aa11.89□□□□□ -0.51
VPREB1-201ENST00000302273 TOM1L2Q6ZVM7 507 aa11.89□□□□□ -0.51
VPREB1-201ENST00000302273 TCP11L2Q8N4U5 519 aa11.89□□□□□ -0.51
VPREB1-201ENST00000302273 LMO7Q8WWI1 1683 aa11.88□□□□□ -0.51
VPREB1-201ENST00000302273 DIAPH1O60610 1272 aaKnown RBP11.88□□□□□ -0.51
VPREB1-201ENST00000302273 FBLN1P23142 703 aa11.88□□□□□ -0.51
VPREB1-201ENST00000302273 RXRBP28702 533 aa11.88□□□□□ -0.51
VPREB1-201ENST00000302273 STRN4Q9NRL3 753 aa11.88□□□□□ -0.51
VPREB1-201ENST00000302273 ZBTB7CA1YPR0 619 aa11.87□□□□□ -0.51
VPREB1-201ENST00000302273 DIEXFQ68CQ4 756 aaKnown RBP11.87□□□□□ -0.51
VPREB1-201ENST00000302273 LARP1Q6PKG0 1096 aaKnown RBP11.87□□□□□ -0.51
VPREB1-201ENST00000302273 IL13P35225 146 aa11.86□□□□□ -0.51
VPREB1-201ENST00000302273 EIF4A2Q14240 407 aaKnown RBP11.86□□□□□ -0.51
VPREB1-201ENST00000302273 PNNQ9H307 717 aaKnown RBP11.86□□□□□ -0.51
VPREB1-201ENST00000302273 NLRP2Q9NX02 1062 aa11.86□□□□□ -0.51
VPREB1-201ENST00000302273 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.86□□□□□ -0.51
VPREB1-201ENST00000302273 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.86□□□□□ -0.51
VPREB1-201ENST00000302273 COL18A1P39060 1754 aa11.85□□□□□ -0.51
VPREB1-201ENST00000302273 CCDC9Q9Y3X0 531 aaKnown RBP11.85□□□□□ -0.51
VPREB1-201ENST00000302273 IGSF1Q8N6C5 1336 aa11.85□□□□□ -0.51
VPREB1-201ENST00000302273 IL2RBP14784 551 aa11.84□□□□□ -0.51
VPREB1-201ENST00000302273 NBPF6Q5VWK0 638 aa11.84□□□□□ -0.51
VPREB1-201ENST00000302273 NBPF4Q96M43 638 aa11.84□□□□□ -0.51
VPREB1-201ENST00000302273 EYA1Q99502 592 aa11.84□□□□□ -0.51
VPREB1-201ENST00000302273 NCAPD2Q15021 1401 aa11.84□□□□□ -0.51
VPREB1-201ENST00000302273 KDRP35968 1356 aa11.83□□□□□ -0.52
VPREB1-201ENST00000302273 FCHSD2O94868 740 aa11.83□□□□□ -0.52
VPREB1-201ENST00000302273 RAPGEF4Q8WZA2 1011 aa11.83□□□□□ -0.52
VPREB1-201ENST00000302273 CCER2I3L3R5 266 aa11.82□□□□□ -0.52
VPREB1-201ENST00000302273 AMOTQ4VCS5 1084 aa11.82□□□□□ -0.52
VPREB1-201ENST00000302273 LTV1Q96GA3 475 aaPredicted RBP11.82□□□□□ -0.52
VPREB1-201ENST00000302273 PLCH1Q4KWH8 1693 aa11.81□□□□□ -0.52
VPREB1-201ENST00000302273 EXOC5O00471 708 aa11.81□□□□□ -0.52
VPREB1-201ENST00000302273 CNGB1Q14028 1251 aaPredicted RBP11.81□□□□□ -0.52
VPREB1-201ENST00000302273 LTN1O94822 1766 aa11.81□□□□□ -0.52
VPREB1-201ENST00000302273 TATP17735 454 aaPredicted RBP11.8□□□□□ -0.52
VPREB1-201ENST00000302273 UPF1Q92900 1129 aaKnown RBP eCLIP11.8□□□□□ -0.52
VPREB1-201ENST00000302273 USP35Q9P2H5 1018 aa11.8□□□□□ -0.52
VPREB1-201ENST00000302273 FAM208AQ9UK61 1670 aaKnown RBP11.8□□□□□ -0.52
VPREB1-201ENST00000302273 NRAPQ86VF7 1730 aa11.8□□□□□ -0.52
VPREB1-201ENST00000302273 MAP2P11137 1827 aaKnown RBP11.79□□□□□ -0.52
VPREB1-201ENST00000302273 COL3A1P02461 1466 aaPredicted RBP11.79□□□□□ -0.52
VPREB1-201ENST00000302273 NEFMP07197 916 aa11.79□□□□□ -0.52
VPREB1-201ENST00000302273 DDB1Q16531 1140 aa11.79□□□□□ -0.52
VPREB1-201ENST00000302273 FAM98CQ17RN3 349 aaKnown RBP11.79□□□□□ -0.52
VPREB1-201ENST00000302273 SEPT12Q8IYM1 358 aa11.79□□□□□ -0.52
VPREB1-201ENST00000302273 SPG7Q9UQ90 795 aa11.79□□□□□ -0.52
VPREB1-201ENST00000302273 PEAK1Q9H792 1746 aa11.79□□□□□ -0.52
VPREB1-201ENST00000302273 DISP2A7MBM2 1401 aa11.78□□□□□ -0.52
VPREB1-201ENST00000302273 U2AF1L5P0DN76 240 aaPredicted RBP11.78□□□□□ -0.52
VPREB1-201ENST00000302273 U2AF1Q01081 240 aaKnown RBP eCLIP11.78□□□□□ -0.52
VPREB1-201ENST00000302273 PDE3BQ13370 1112 aa11.78□□□□□ -0.52
VPREB1-201ENST00000302273 PLEKHO1Q53GL0 409 aaPredicted RBP11.78□□□□□ -0.52
VPREB1-201ENST00000302273 SULT6B1Q6IMI4 303 aa11.78□□□□□ -0.52
VPREB1-201ENST00000302273 BCL9O00512 1426 aa11.77□□□□□ -0.52
VPREB1-201ENST00000302273 U2SURPO15042 1029 aaKnown RBP11.77□□□□□ -0.53
VPREB1-201ENST00000302273 WDR43Q15061 677 aaKnown RBP eCLIP11.77□□□□□ -0.53
VPREB1-201ENST00000302273 ZCRB1Q8TBF4 217 aaKnown RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms