RNA–Protein interactions for RNA: ENSMUST00000211788.1

Ptpre-208, Transcript of Receptor-type tyrosine-protein phosphatase epsilon, mousemouse

TSL 1 (best) BASIC

Gene Ptpre, Length 2,331 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpre-208ENSMUST00000211788 Tmc1Q8R4P5 757 aa13.27□□□□□ -0.28
Ptpre-208ENSMUST00000211788 Zfp91Q62511 572 aa13.27□□□□□ -0.29
Ptpre-208ENSMUST00000211788 Mcm10Q0VBD2 885 aa13.26□□□□□ -0.29
Ptpre-208ENSMUST00000211788 Rsph6aQ8CDR2 708 aa13.26□□□□□ -0.29
Ptpre-208ENSMUST00000211788 Plin1Q8CGN5 517 aa13.25□□□□□ -0.29
Ptpre-208ENSMUST00000211788 Chd4Q6PDQ2 1915 aaKnown RBP13.25□□□□□ -0.29
Ptpre-208ENSMUST00000211788 Lekr1B2RVN1 116 aa13.25□□□□□ -0.29
Ptpre-208ENSMUST00000211788 Senp3Q9EP97 568 aaKnown RBP13.25□□□□□ -0.29
Ptpre-208ENSMUST00000211788 Gm6268A2A3U9 297 aa13.24□□□□□ -0.29
Ptpre-208ENSMUST00000211788 NudcO35685 332 aaKnown RBP13.24□□□□□ -0.29
Ptpre-208ENSMUST00000211788 Sox12Q04890 314 aa13.24□□□□□ -0.29
Ptpre-208ENSMUST00000211788 Znf330Q922H9 316 aa13.24□□□□□ -0.29
Ptpre-208ENSMUST00000211788 Rreb1Q3UH06 1700 aaKnown RBP13.24□□□□□ -0.29
Ptpre-208ENSMUST00000211788 Atp7bQ64446 1462 aa13.24□□□□□ -0.29
Ptpre-208ENSMUST00000211788 Vgll3P85442 326 aa13.24□□□□□ -0.29
Ptpre-208ENSMUST00000211788 Znf692Q3U381 531 aa13.24□□□□□ -0.29
Ptpre-208ENSMUST00000211788 Isy1Q69ZQ2 285 aaKnown RBP13.24□□□□□ -0.29
Ptpre-208ENSMUST00000211788 Cabp2Q9JLK4 216 aa13.24□□□□□ -0.29
Ptpre-208ENSMUST00000211788 Hoxb7P09024 217 aa13.23□□□□□ -0.29
Ptpre-208ENSMUST00000211788 Trim30dE9PWL0 497 aa13.23□□□□□ -0.29
Ptpre-208ENSMUST00000211788 G3bp1P97855 465 aaKnown RBP13.23□□□□□ -0.29
Ptpre-208ENSMUST00000211788 4930567H17RikQ3V0K5 233 aa13.23□□□□□ -0.29
Ptpre-208ENSMUST00000211788 Ddrgk1Q80WW9 315 aa13.23□□□□□ -0.29
Ptpre-208ENSMUST00000211788 Sirt1Q923E4 737 aa13.23□□□□□ -0.29
Ptpre-208ENSMUST00000211788 Cdc37l1Q9CZP7 335 aa13.23□□□□□ -0.29
Ptpre-208ENSMUST00000211788 Ccdc171E9Q1U1 1324 aa13.22□□□□□ -0.29
Ptpre-208ENSMUST00000211788 Astn2Q80Z10 1352 aa13.22□□□□□ -0.29
Ptpre-208ENSMUST00000211788 MyclP10166 368 aa13.21□□□□□ -0.29
Ptpre-208ENSMUST00000211788 Chrna2Q91X60 512 aa13.21□□□□□ -0.29
Ptpre-208ENSMUST00000211788 Arap3Q8R5G7 1538 aa13.21□□□□□ -0.29
Ptpre-208ENSMUST00000211788 N4bp2F8VQG7 1678 aaKnown RBP13.21□□□□□ -0.3
Ptpre-208ENSMUST00000211788 Spef2Q8C9J3 1734 aa13.21□□□□□ -0.3
Ptpre-208ENSMUST00000211788 Eif4a2P10630 407 aa13.21□□□□□ -0.3
Ptpre-208ENSMUST00000211788 Nectin2P32507 530 aa13.21□□□□□ -0.3
Ptpre-208ENSMUST00000211788 MpripP97434 1024 aa13.21□□□□□ -0.3
Ptpre-208ENSMUST00000211788 Maco1Q7TQE6 664 aaKnown RBP13.21□□□□□ -0.3
Ptpre-208ENSMUST00000211788 Tmco5bQ80X59 307 aa13.21□□□□□ -0.3
Ptpre-208ENSMUST00000211788 4930407I10RikD3Z5T8 1512 aa13.2□□□□□ -0.3
Ptpre-208ENSMUST00000211788 Cluap1Q8R3P7 413 aa13.2□□□□□ -0.3
Ptpre-208ENSMUST00000211788 PogkQ80TC5 607 aa13.19□□□□□ -0.3
Ptpre-208ENSMUST00000211788 Nutm1Q8BHP2 1126 aa13.19□□□□□ -0.3
Ptpre-208ENSMUST00000211788 Gnai1B2RSH2 354 aa13.19□□□□□ -0.3
Ptpre-208ENSMUST00000211788 Gnai3Q9DC51 354 aa13.19□□□□□ -0.3
Ptpre-208ENSMUST00000211788 Idi1P58044 227 aa13.18□□□□□ -0.3
Ptpre-208ENSMUST00000211788 Znf335A2A5K6 1337 aa13.18□□□□□ -0.3
Ptpre-208ENSMUST00000211788 Tnnt2P50752 301 aa13.18□□□□□ -0.3
Ptpre-208ENSMUST00000211788 U2surpQ6NV83 1029 aaKnown RBP13.18□□□□□ -0.3
Ptpre-208ENSMUST00000211788 Stk31Q99MW1 1018 aa13.18□□□□□ -0.3
Ptpre-208ENSMUST00000211788 Abcc10Q8R4P9 1501 aa13.17□□□□□ -0.3
Ptpre-208ENSMUST00000211788 Gm10563F6WIE4 79 aa13.17□□□□□ -0.3
Ptpre-208ENSMUST00000211788 Vamp4O70480 141 aa13.17□□□□□ -0.3
Ptpre-208ENSMUST00000211788 Tshz2Q68FE9 1030 aa13.17□□□□□ -0.3
Ptpre-208ENSMUST00000211788 Plekhm2Q80TQ5 1018 aa13.17□□□□□ -0.3
Ptpre-208ENSMUST00000211788 Ak7Q9D2H2 614 aa13.17□□□□□ -0.3
Ptpre-208ENSMUST00000211788 Usp16Q99LG0 825 aa13.17□□□□□ -0.3
Ptpre-208ENSMUST00000211788 Nsd3Q6P2L6 1439 aa13.16□□□□□ -0.3
Ptpre-208ENSMUST00000211788 D430041D05RikF6ZGR6 1678 aa13.16□□□□□ -0.3
Ptpre-208ENSMUST00000211788 Paxip1Q6NZQ4 1056 aa13.16□□□□□ -0.3
Ptpre-208ENSMUST00000211788 Ccdc183A2AJB1 534 aa13.16□□□□□ -0.3
Ptpre-208ENSMUST00000211788 Klhdc4Q921I2 584 aa13.16□□□□□ -0.3
Ptpre-208ENSMUST00000211788 Kif20bQ80WE4 1774 aaKnown RBP13.15□□□□□ -0.3
Ptpre-208ENSMUST00000211788 Ipo8Q7TMY7 1010 aa13.15□□□□□ -0.3
Ptpre-208ENSMUST00000211788 Dennd6aQ8BH65 605 aa13.15□□□□□ -0.3
Ptpre-208ENSMUST00000211788 GphnQ8BUV3 769 aaKnown RBP13.15□□□□□ -0.3
Ptpre-208ENSMUST00000211788 Ap3b2Q9JME5 1082 aa13.15□□□□□ -0.3
Ptpre-208ENSMUST00000211788 Cdk12Q14AX6 1484 aaKnown RBP13.14□□□□□ -0.31
Ptpre-208ENSMUST00000211788 Q3UPC7 1272 aa13.14□□□□□ -0.31
Ptpre-208ENSMUST00000211788 Tmem94Q7TSH8 1360 aa13.14□□□□□ -0.31
Ptpre-208ENSMUST00000211788 CemipQ8BI06 1361 aa13.14□□□□□ -0.31
Ptpre-208ENSMUST00000211788 Med1Q925J9 1575 aa13.14□□□□□ -0.31
Ptpre-208ENSMUST00000211788 Gm21190A0A0G2JGJ6 266 aa13.14□□□□□ -0.31
Ptpre-208ENSMUST00000211788 Ppp2r3aB2RXC8 1150 aa13.14□□□□□ -0.31
Ptpre-208ENSMUST00000211788 Cabp4Q8VHC5 271 aa13.14□□□□□ -0.31
Ptpre-208ENSMUST00000211788 KarsQ99MN1 595 aaKnown RBP13.14□□□□□ -0.31
Ptpre-208ENSMUST00000211788 Pik3c2aQ61194 1686 aa13.14□□□□□ -0.31
Ptpre-208ENSMUST00000211788 AU019823E9PUQ3 292 aa13.13□□□□□ -0.31
Ptpre-208ENSMUST00000211788 Aldh1l1Q8R0Y6 902 aa13.13□□□□□ -0.31
Ptpre-208ENSMUST00000211788 Atl3Q91YH5 541 aa13.13□□□□□ -0.31
Ptpre-208ENSMUST00000211788 C5P06684 1680 aa13.13□□□□□ -0.31
Ptpre-208ENSMUST00000211788 FancaQ9JL70 1439 aa13.13□□□□□ -0.31
Ptpre-208ENSMUST00000211788 NalcnQ8BXR5 1738 aa13.12□□□□□ -0.31
Ptpre-208ENSMUST00000211788 Nckap5lQ6GQX2 1323 aa13.12□□□□□ -0.31
Ptpre-208ENSMUST00000211788 Pnmal2G3X9N3 661 aa13.12□□□□□ -0.31
Ptpre-208ENSMUST00000211788 Hsp90ab1P11499 724 aaKnown RBP13.12□□□□□ -0.31
Ptpre-208ENSMUST00000211788 Nlgn1Q99K10 843 aa13.12□□□□□ -0.31
Ptpre-208ENSMUST00000211788 Frmpd2A0A140LI67 1392 aa13.12□□□□□ -0.31
Ptpre-208ENSMUST00000211788 Als2Q920R0 1651 aa13.12□□□□□ -0.31
Ptpre-208ENSMUST00000211788 1700019A02RikA0A087WPV9 146 aa13.11□□□□□ -0.31
Ptpre-208ENSMUST00000211788 Ubr1O70481 1757 aa13.11□□□□□ -0.31
Ptpre-208ENSMUST00000211788 Col16a1Q8BLX7 1580 aa13.11□□□□□ -0.31
Ptpre-208ENSMUST00000211788 Mdc1Q5PSV9 1707 aa13.11□□□□□ -0.31
Ptpre-208ENSMUST00000211788 Mon2Q80TL7 1715 aa13.11□□□□□ -0.31
Ptpre-208ENSMUST00000211788 Sos1Q62245 1319 aa13.11□□□□□ -0.31
Ptpre-208ENSMUST00000211788 Parp14Q2EMV9 1817 aa13.11□□□□□ -0.31
Ptpre-208ENSMUST00000211788 Pdcl2Q78Y63 240 aa13.11□□□□□ -0.31
Ptpre-208ENSMUST00000211788 TmpoQ61033 693 aaKnown RBP13.1□□□□□ -0.31
Ptpre-208ENSMUST00000211788 Eif2s2Q99L45 331 aaKnown RBP13.1□□□□□ -0.31
Ptpre-208ENSMUST00000211788 Map2P20357 1828 aa13.1□□□□□ -0.31
Ptpre-208ENSMUST00000211788 MvpQ9EQK5 861 aa13.1□□□□□ -0.31
Ptpre-208ENSMUST00000211788 Bcl9Q9D219 1425 aa13.09□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 73 ms