RNA–Protein interactions for RNA: ENSMUST00000211788.1

Ptpre-208, Transcript of Receptor-type tyrosine-protein phosphatase epsilon, mousemouse

TSL 1 (best) BASIC

Gene Ptpre, Length 2,331 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpre-208ENSMUST00000211788 NischQ80TM9 1593 aa20.55■□□□□ 0.88
Ptpre-208ENSMUST00000211788 Gm35339A0A140LHH9 1649 aa20.24■□□□□ 0.83
Ptpre-208ENSMUST00000211788 Abcc9P70170 1546 aa19.94■□□□□ 0.78
Ptpre-208ENSMUST00000211788 Abcc8B2RUS7 1588 aa19.55■□□□□ 0.72
Ptpre-208ENSMUST00000211788 Rhox8Q6VSS7 320 aa18.95■□□□□ 0.62
Ptpre-208ENSMUST00000211788 Rtl1Q7M732 1744 aa18.43■□□□□ 0.54
Ptpre-208ENSMUST00000211788 ScribQ80U72 1612 aa18.32■□□□□ 0.52
Ptpre-208ENSMUST00000211788 Dcaf1Q80TR8 1506 aa18.17■□□□□ 0.5
Ptpre-208ENSMUST00000211788 Ccdc180J3QNE4 1664 aa18.07■□□□□ 0.48
Ptpre-208ENSMUST00000211788 Rpgrip1Q9EPQ2 1331 aa18.04■□□□□ 0.48
Ptpre-208ENSMUST00000211788 Rb1cc1Q9ESK9 1588 aa18.01■□□□□ 0.47
Ptpre-208ENSMUST00000211788 Kdm5dQ62240 1548 aa17.96■□□□□ 0.47
Ptpre-208ENSMUST00000211788 Zcchc6Q5BLK4 1491 aaKnown RBP17.85■□□□□ 0.45
Ptpre-208ENSMUST00000211788 NacadQ5SWP3 1504 aa17.81■□□□□ 0.44
Ptpre-208ENSMUST00000211788 Baz1aO88379 1555 aa17.78■□□□□ 0.44
Ptpre-208ENSMUST00000211788 Ccdc136Q3TVA9 1136 aa17.6■□□□□ 0.41
Ptpre-208ENSMUST00000211788 Crybg2B7ZCC2 1516 aa17.43■□□□□ 0.38
Ptpre-208ENSMUST00000211788 Sycp2Q9CUU3 1500 aa17.43■□□□□ 0.38
Ptpre-208ENSMUST00000211788 Smarca2Q6DIC0 1577 aa17.36■□□□□ 0.37
Ptpre-208ENSMUST00000211788 HrcG5E8J6 738 aa17.25■□□□□ 0.35
Ptpre-208ENSMUST00000211788 Trim41Q5NCC3 630 aa17.19■□□□□ 0.34
Ptpre-208ENSMUST00000211788 BicraF8VPZ9 1578 aa17.07■□□□□ 0.32
Ptpre-208ENSMUST00000211788 Cecr2E9Q2Z1 1453 aa17.01■□□□□ 0.31
Ptpre-208ENSMUST00000211788 Brd4Q9ESU6 1400 aaKnown RBP16.95■□□□□ 0.3
Ptpre-208ENSMUST00000211788 Acin1Q9JIX8 1338 aaKnown RBP16.91■□□□□ 0.3
Ptpre-208ENSMUST00000211788 Cngb1E1AZ71 1325 aa16.85■□□□□ 0.29
Ptpre-208ENSMUST00000211788 Synj1Q8CHC4 1574 aa16.84■□□□□ 0.29
Ptpre-208ENSMUST00000211788 Cep164Q5DU05 1446 aa16.82■□□□□ 0.28
Ptpre-208ENSMUST00000211788 Pcgf6Q99NA9 353 aa16.79■□□□□ 0.28
Ptpre-208ENSMUST00000211788 Ehmt2Q9Z148 1263 aaKnown RBP16.79■□□□□ 0.28
Ptpre-208ENSMUST00000211788 Myt1Q8CFC2 1127 aa16.78■□□□□ 0.28
Ptpre-208ENSMUST00000211788 CftrP26361 1476 aa16.74■□□□□ 0.27
Ptpre-208ENSMUST00000211788 Golga3P55937 1487 aa16.72■□□□□ 0.27
Ptpre-208ENSMUST00000211788 Rsf1E9PWW9 1441 aaKnown RBP16.7■□□□□ 0.26
Ptpre-208ENSMUST00000211788 Chic1Q8CBW7 227 aa16.69■□□□□ 0.26
Ptpre-208ENSMUST00000211788 Esf1Q3V1V3 845 aaKnown RBP16.68■□□□□ 0.26
Ptpre-208ENSMUST00000211788 Smarca4Q3TKT4 1613 aaKnown RBP16.66■□□□□ 0.26
Ptpre-208ENSMUST00000211788 Cttnbp2B9EJA2 1648 aa16.65■□□□□ 0.26
Ptpre-208ENSMUST00000211788 Ccdc88bQ4QRL3 1481 aa16.62■□□□□ 0.25
Ptpre-208ENSMUST00000211788 Las1lA2BE28 776 aaKnown RBP16.58■□□□□ 0.25
Ptpre-208ENSMUST00000211788 Gab3Q8BSM5 595 aa16.56■□□□□ 0.24
Ptpre-208ENSMUST00000211788 Top2bQ64511 1612 aa16.54■□□□□ 0.24
Ptpre-208ENSMUST00000211788 Iqgap2Q3UQ44 1575 aa16.46■□□□□ 0.22
Ptpre-208ENSMUST00000211788 Cc2d2aQ8CFW7 1633 aa16.42■□□□□ 0.22
Ptpre-208ENSMUST00000211788 Atad2bE9Q166 1460 aaKnown RBP16.39■□□□□ 0.21
Ptpre-208ENSMUST00000211788 Pds5bQ4VA53 1446 aaKnown RBP16.34■□□□□ 0.21
Ptpre-208ENSMUST00000211788 Fmn1Q05860 1466 aa16.31■□□□□ 0.2
Ptpre-208ENSMUST00000211788 CenpbP27790 599 aa16.29■□□□□ 0.2
Ptpre-208ENSMUST00000211788 Top2aQ01320 1528 aaKnown RBP16.21■□□□□ 0.19
Ptpre-208ENSMUST00000211788 Frmpd1A2AKB4 1549 aa16.15■□□□□ 0.18
Ptpre-208ENSMUST00000211788 Rapgef2Q8CHG7 1496 aa16.15■□□□□ 0.18
Ptpre-208ENSMUST00000211788 Wdr62Q3U3T8 1523 aa16.14■□□□□ 0.17
Ptpre-208ENSMUST00000211788 Neurod1Q60867 357 aa16.1■□□□□ 0.17
Ptpre-208ENSMUST00000211788 DiexfQ8BTT6 772 aaKnown RBP16.08■□□□□ 0.16
Ptpre-208ENSMUST00000211788 Ercc6F8VPZ5 1481 aa16.07■□□□□ 0.16
Ptpre-208ENSMUST00000211788 TnnQ80Z71 1560 aa16.07■□□□□ 0.16
Ptpre-208ENSMUST00000211788 Cep162Q6ZQ06 1403 aa16.03■□□□□ 0.16
Ptpre-208ENSMUST00000211788 Npm2Q80W85 207 aa16.02■□□□□ 0.16
Ptpre-208ENSMUST00000211788 Myt1lP97500 1187 aa16.02■□□□□ 0.15
Ptpre-208ENSMUST00000211788 Lamc3Q9R0B6 1581 aa15.97■□□□□ 0.15
Ptpre-208ENSMUST00000211788 Kif15Q6P9L6 1387 aa15.97■□□□□ 0.15
Ptpre-208ENSMUST00000211788 Unc13aQ4KUS2 1712 aa15.97■□□□□ 0.15
Ptpre-208ENSMUST00000211788 Il27Q8K3I6 234 aa15.93■□□□□ 0.14
Ptpre-208ENSMUST00000211788 Supt5hO55201 1082 aaKnown RBP15.91■□□□□ 0.14
Ptpre-208ENSMUST00000211788 Mier1Q5UAK0 511 aa15.91■□□□□ 0.14
Ptpre-208ENSMUST00000211788 1700123L14RikQ3V2K7 440 aa15.9■□□□□ 0.14
Ptpre-208ENSMUST00000211788 Eif4g1Q6NZJ6 1600 aaKnown RBP15.88■□□□□ 0.13
Ptpre-208ENSMUST00000211788 Anks4bQ8K3X6 423 aa15.85■□□□□ 0.13
Ptpre-208ENSMUST00000211788 PtprkP35822 1457 aa15.85■□□□□ 0.13
Ptpre-208ENSMUST00000211788 Camsap1A2AHC3 1581 aa15.84■□□□□ 0.13
Ptpre-208ENSMUST00000211788 UbtfP25976 765 aaKnown RBP15.84■□□□□ 0.13
Ptpre-208ENSMUST00000211788 Thoc2B1AZI6 1594 aaKnown RBP15.83■□□□□ 0.12
Ptpre-208ENSMUST00000211788 Aplp2Q06335 707 aa15.81■□□□□ 0.12
Ptpre-208ENSMUST00000211788 Phldb1Q6PDH0 1371 aaKnown RBP15.81■□□□□ 0.12
Ptpre-208ENSMUST00000211788 Arhgap35Q91YM2 1499 aa15.8■□□□□ 0.12
Ptpre-208ENSMUST00000211788 NrkQ9R0G8 1455 aa15.79■□□□□ 0.12
Ptpre-208ENSMUST00000211788 Ccdc18Q640L5 1455 aa15.79■□□□□ 0.12
Ptpre-208ENSMUST00000211788 Clip1Q922J3 1391 aa15.78■□□□□ 0.12
Ptpre-208ENSMUST00000211788 NefmP08553 848 aa15.77■□□□□ 0.12
Ptpre-208ENSMUST00000211788 Shroom4Q1W617 1475 aa15.77■□□□□ 0.11
Ptpre-208ENSMUST00000211788 Ubl4bQ9CQ84 188 aa15.74■□□□□ 0.11
Ptpre-208ENSMUST00000211788 Grin2bQ01097 1482 aa15.73■□□□□ 0.11
Ptpre-208ENSMUST00000211788 Cux2P70298 1426 aa15.72■□□□□ 0.11
Ptpre-208ENSMUST00000211788 Bcl11aQ9QYE3 773 aa15.71■□□□□ 0.11
Ptpre-208ENSMUST00000211788 Plekhg3Q4VAC9 1341 aa15.7■□□□□ 0.1
Ptpre-208ENSMUST00000211788 Zeb1Q64318 1117 aa15.69■□□□□ 0.1
Ptpre-208ENSMUST00000211788 Fam135aQ6NS59 1506 aa15.66■□□□□ 0.1
Ptpre-208ENSMUST00000211788 Npm1Q61937 292 aaKnown RBP15.66■□□□□ 0.1
Ptpre-208ENSMUST00000211788 Map3k1P53349 1493 aa15.65■□□□□ 0.1
Ptpre-208ENSMUST00000211788 Eea1Q8BL66 1411 aa15.64■□□□□ 0.09
Ptpre-208ENSMUST00000211788 Ap3b1Q9Z1T1 1105 aa15.62■□□□□ 0.09
Ptpre-208ENSMUST00000211788 Arap1Q4LDD4 1452 aa15.61■□□□□ 0.09
Ptpre-208ENSMUST00000211788 Baz1bQ9Z277 1479 aa15.61■□□□□ 0.09
Ptpre-208ENSMUST00000211788 Mroh2bQ7M6Y6 1581 aa15.6■□□□□ 0.09
Ptpre-208ENSMUST00000211788 Setd5Q5XJV7 1441 aa15.6■□□□□ 0.09
Ptpre-208ENSMUST00000211788 LrpprcQ6PB66 1392 aaKnown RBP15.57■□□□□ 0.08
Ptpre-208ENSMUST00000211788 Arhgef5E9Q7D5 1581 aa15.54■□□□□ 0.08
Ptpre-208ENSMUST00000211788 Efcab5A0JP43 1406 aa15.53■□□□□ 0.08
Ptpre-208ENSMUST00000211788 PogzQ8BZH4 1409 aaKnown RBP15.53■□□□□ 0.08
Ptpre-208ENSMUST00000211788 Csrnp3P59055 597 aa15.52■□□□□ 0.07
Retrieved 100 of 22,080 RNA–protein pairs in 28.4 ms