RNA–Protein interactions for RNA: ENSMUST00000202681.3

Pdgfra-208, Transcript of Platelet-derived growth factor receptor alpha, mousemouse

TSL 1 (best) BASIC

Gene Pdgfra, Length 2,876 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdgfra-208ENSMUST00000202681 Ksr2Q3UVC0 959 aa10.68□□□□□ -0.7
Pdgfra-208ENSMUST00000202681 Anp32cQ64G17 123 aa10.68□□□□□ -0.7
Pdgfra-208ENSMUST00000202681 Noa1Q9JJG9 693 aaKnown RBP10.68□□□□□ -0.7
Pdgfra-208ENSMUST00000202681 Ncbp1Q3UYV9 790 aaKnown RBP10.67□□□□□ -0.7
Pdgfra-208ENSMUST00000202681 Rbm27Q5SFM8 1060 aaKnown RBP10.67□□□□□ -0.7
Pdgfra-208ENSMUST00000202681 GorabQ8BRM2 368 aa10.67□□□□□ -0.7
Pdgfra-208ENSMUST00000202681 Kdm4aQ8BW72 1064 aa10.67□□□□□ -0.7
Pdgfra-208ENSMUST00000202681 Edc4Q3UJB9 1406 aaKnown RBP10.67□□□□□ -0.7
Pdgfra-208ENSMUST00000202681 FanciQ8K368 1330 aa10.67□□□□□ -0.7
Pdgfra-208ENSMUST00000202681 Itsn2Q9Z0R6 1659 aa10.67□□□□□ -0.7
Pdgfra-208ENSMUST00000202681 MpndQ3TV65 487 aa10.67□□□□□ -0.7
Pdgfra-208ENSMUST00000202681 Tbc1d31Q6NXY1 996 aa10.67□□□□□ -0.7
Pdgfra-208ENSMUST00000202681 Fam114a1Q9D281 569 aa10.67□□□□□ -0.7
Pdgfra-208ENSMUST00000202681 Mdc1Q5PSV9 1707 aa10.67□□□□□ -0.7
Pdgfra-208ENSMUST00000202681 Syce3B5KM66 88 aa10.67□□□□□ -0.7
Pdgfra-208ENSMUST00000202681 Zkscan1Q8BGS3 561 aaKnown RBP10.67□□□□□ -0.7
Pdgfra-208ENSMUST00000202681 Inpp5bQ8K337 993 aa10.67□□□□□ -0.7
Pdgfra-208ENSMUST00000202681 Zfp251Q6PCX8 632 aa10.66□□□□□ -0.7
Pdgfra-208ENSMUST00000202681 1700010I14RikQ7TPG0 532 aa10.66□□□□□ -0.7
Pdgfra-208ENSMUST00000202681 Ccar1Q8CH18 1146 aaKnown RBP10.66□□□□□ -0.7
Pdgfra-208ENSMUST00000202681 Chmp4bQ9D8B3 224 aaKnown RBP10.66□□□□□ -0.7
Pdgfra-208ENSMUST00000202681 Robo2Q7TPD3 1470 aa10.66□□□□□ -0.7
Pdgfra-208ENSMUST00000202681 Sox12Q04890 314 aa10.66□□□□□ -0.7
Pdgfra-208ENSMUST00000202681 KdrP35918 1367 aa10.65□□□□□ -0.7
Pdgfra-208ENSMUST00000202681 Ptgs1P22437 602 aa10.65□□□□□ -0.7
Pdgfra-208ENSMUST00000202681 Rnf214Q8BFU3 668 aaKnown RBP10.65□□□□□ -0.7
Pdgfra-208ENSMUST00000202681 Atp1b4Q99ME6 356 aa10.65□□□□□ -0.7
Pdgfra-208ENSMUST00000202681 Tbc1d9Q3UYK3 1264 aa10.65□□□□□ -0.7
Pdgfra-208ENSMUST00000202681 Gtpbp6Q3U6U5 514 aa10.64□□□□□ -0.71
Pdgfra-208ENSMUST00000202681 E4f1Q8CCE9 783 aa10.64□□□□□ -0.71
Pdgfra-208ENSMUST00000202681 Glipr1l2Q9CQ35 332 aa10.64□□□□□ -0.71
Pdgfra-208ENSMUST00000202681 Aplp1Q03157 653 aa10.64□□□□□ -0.71
Pdgfra-208ENSMUST00000202681 Atp10aO54827 1508 aa10.64□□□□□ -0.71
Pdgfra-208ENSMUST00000202681 Tulp4Q9JIL5 1547 aa10.64□□□□□ -0.71
Pdgfra-208ENSMUST00000202681 Cers3Q1A3B0 383 aa10.63□□□□□ -0.71
Pdgfra-208ENSMUST00000202681 Ggt6Q6PDE7 497 aa10.63□□□□□ -0.71
Pdgfra-208ENSMUST00000202681 Fan1Q69ZT1 1020 aa10.63□□□□□ -0.71
Pdgfra-208ENSMUST00000202681 Hecw2Q6I6G8 1578 aa10.63□□□□□ -0.71
Pdgfra-208ENSMUST00000202681 Gripap1Q8VD04 806 aa10.63□□□□□ -0.71
Pdgfra-208ENSMUST00000202681 Myom1Q62234 1667 aaKnown RBP10.63□□□□□ -0.71
Pdgfra-208ENSMUST00000202681 Nphp4P59240 1425 aa10.63□□□□□ -0.71
Pdgfra-208ENSMUST00000202681 Wdr63B2RY71 923 aa10.63□□□□□ -0.71
Pdgfra-208ENSMUST00000202681 Cavin1O54724 392 aa10.63□□□□□ -0.71
Pdgfra-208ENSMUST00000202681 EngaseQ8BX80 734 aa10.63□□□□□ -0.71
Pdgfra-208ENSMUST00000202681 Chd1lQ9CXF7 900 aa10.63□□□□□ -0.71
Pdgfra-208ENSMUST00000202681 Rbm42Q91V81 474 aaKnown RBP10.62□□□□□ -0.71
Pdgfra-208ENSMUST00000202681 AnkarA2RT91 1465 aa10.62□□□□□ -0.71
Pdgfra-208ENSMUST00000202681 Asxl2Q8BZ32 1370 aa10.62□□□□□ -0.71
Pdgfra-208ENSMUST00000202681 Kif4P33174 1231 aa10.62□□□□□ -0.71
Pdgfra-208ENSMUST00000202681 Bms1Q6PGF5 1284 aaKnown RBP10.62□□□□□ -0.71
Pdgfra-208ENSMUST00000202681 Maco1Q7TQE6 664 aaKnown RBP10.62□□□□□ -0.71
Pdgfra-208ENSMUST00000202681 Ercc6lQ8BHK9 1240 aa10.62□□□□□ -0.71
Pdgfra-208ENSMUST00000202681 Plcd3Q8K2J0 785 aa10.62□□□□□ -0.71
Pdgfra-208ENSMUST00000202681 Irx4Q9QY61 515 aa10.62□□□□□ -0.71
Pdgfra-208ENSMUST00000202681 Ccdc173A0JLY1 547 aa10.61□□□□□ -0.71
Pdgfra-208ENSMUST00000202681 Bach2P97303 839 aa10.61□□□□□ -0.71
Pdgfra-208ENSMUST00000202681 GsdmaQ9EST1 446 aa10.61□□□□□ -0.71
Pdgfra-208ENSMUST00000202681 Nek4Q9Z1J2 792 aa10.61□□□□□ -0.71
Pdgfra-208ENSMUST00000202681 Neurl4Q5NCX5 1563 aa10.61□□□□□ -0.71
Pdgfra-208ENSMUST00000202681 Nsd2Q8BVE8 1365 aa10.61□□□□□ -0.71
Pdgfra-208ENSMUST00000202681 Gtpbp4Q99ME9 634 aaKnown RBP10.61□□□□□ -0.71
Pdgfra-208ENSMUST00000202681 PtmsQ9D0J8 101 aaKnown RBP10.61□□□□□ -0.71
Pdgfra-208ENSMUST00000202681 Abcc6Q9R1S7 1498 aa10.61□□□□□ -0.71
Pdgfra-208ENSMUST00000202681 ErbinQ80TH2 1402 aa10.61□□□□□ -0.71
Pdgfra-208ENSMUST00000202681 Gprasp1Q5U4C1 1347 aa10.6□□□□□ -0.71
Pdgfra-208ENSMUST00000202681 Nfatc2ipO09130 412 aa10.6□□□□□ -0.71
Pdgfra-208ENSMUST00000202681 Cetn4Q8K4K1 168 aa10.6□□□□□ -0.71
Pdgfra-208ENSMUST00000202681 Cdc42bpgQ80UW5 1551 aa10.6□□□□□ -0.71
Pdgfra-208ENSMUST00000202681 Dync1i1O88485 628 aa10.6□□□□□ -0.71
Pdgfra-208ENSMUST00000202681 VaspP70460 375 aaKnown RBP10.6□□□□□ -0.71
Pdgfra-208ENSMUST00000202681 Serpina10Q8R121 448 aa10.6□□□□□ -0.71
Pdgfra-208ENSMUST00000202681 Stk26Q99JT2 416 aa10.6□□□□□ -0.71
Pdgfra-208ENSMUST00000202681 U2af2P26369 475 aaKnown RBP10.59□□□□□ -0.71
Pdgfra-208ENSMUST00000202681 Zdhhc9P59268 364 aa10.59□□□□□ -0.71
Pdgfra-208ENSMUST00000202681 Safb2Q80YR5 991 aaKnown RBP10.59□□□□□ -0.71
Pdgfra-208ENSMUST00000202681 Znf330Q922H9 316 aa10.59□□□□□ -0.71
Pdgfra-208ENSMUST00000202681 IbtkQ6ZPR6 1352 aaKnown RBP10.59□□□□□ -0.71
Pdgfra-208ENSMUST00000202681 Synj2Q9D2G5 1434 aa10.59□□□□□ -0.71
Pdgfra-208ENSMUST00000202681 Hvcn1Q3U2S8 269 aa10.59□□□□□ -0.71
Pdgfra-208ENSMUST00000202681 Wwc1Q5SXA9 1104 aa10.59□□□□□ -0.71
Pdgfra-208ENSMUST00000202681 Topbp1Q6ZQF0 1515 aa10.59□□□□□ -0.71
Pdgfra-208ENSMUST00000202681 Cnga1P29974 684 aa10.59□□□□□ -0.71
Pdgfra-208ENSMUST00000202681 Stk11ipQ3TAA7 1072 aa10.59□□□□□ -0.71
Pdgfra-208ENSMUST00000202681 MlecQ6ZQI3 291 aaKnown RBP10.59□□□□□ -0.71
Pdgfra-208ENSMUST00000202681 Apaf1O88879 1249 aa10.58□□□□□ -0.72
Pdgfra-208ENSMUST00000202681 Zranb1Q7M760 708 aa10.58□□□□□ -0.72
Pdgfra-208ENSMUST00000202681 Sass6Q80UK7 654 aa10.58□□□□□ -0.72
Pdgfra-208ENSMUST00000202681 Olfml1Q8BSH2 233 aa10.58□□□□□ -0.72
Pdgfra-208ENSMUST00000202681 AatkQ80YE4 1365 aa10.58□□□□□ -0.72
Pdgfra-208ENSMUST00000202681 Tmem131lQ3U3D7 1597 aa10.58□□□□□ -0.72
Pdgfra-208ENSMUST00000202681 NpatQ8BMA5 1420 aa10.58□□□□□ -0.72
Pdgfra-208ENSMUST00000202681 Gadd45bP22339 160 aa10.58□□□□□ -0.72
Pdgfra-208ENSMUST00000202681 LifrP42703 1092 aa10.58□□□□□ -0.72
Pdgfra-208ENSMUST00000202681 P2rx7Q9Z1M0 595 aa10.58□□□□□ -0.72
Pdgfra-208ENSMUST00000202681 Ccdc146E9Q9F7 977 aa10.57□□□□□ -0.72
Pdgfra-208ENSMUST00000202681 Sh3bp1P55194 680 aa10.57□□□□□ -0.72
Pdgfra-208ENSMUST00000202681 Iqgap3F8VQ29 1632 aa10.57□□□□□ -0.72
Pdgfra-208ENSMUST00000202681 AU022751B1B0V2 589 aa10.57□□□□□ -0.72
Pdgfra-208ENSMUST00000202681 Cald1E9QA15 768 aaKnown RBP10.57□□□□□ -0.72
Pdgfra-208ENSMUST00000202681 Kcnj4P52189 445 aa10.57□□□□□ -0.72
Retrieved 100 of 22,080 RNA–protein pairs in 25.8 ms