RNA–Protein interactions for RNA: ENSMUST00000202681.3

Pdgfra-208, Transcript of Platelet-derived growth factor receptor alpha, mousemouse

TSL 1 (best) BASIC

Gene Pdgfra, Length 2,876 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdgfra-208ENSMUST00000202681 NischQ80TM9 1593 aa15.71■□□□□ 0.11
Pdgfra-208ENSMUST00000202681 Gm35339A0A140LHH9 1649 aa15.42■□□□□ 0.06
Pdgfra-208ENSMUST00000202681 Abcc9P70170 1546 aa15.17■□□□□ 0.02
Pdgfra-208ENSMUST00000202681 Rpgrip1Q9EPQ2 1331 aa15.07■□□□□ 0
Pdgfra-208ENSMUST00000202681 Abcc8B2RUS7 1588 aa15□□□□□ -0.01
Pdgfra-208ENSMUST00000202681 Ube2uB1AUC4 352 aa14.95□□□□□ -0.02
Pdgfra-208ENSMUST00000202681 Chic1Q8CBW7 227 aa14.82□□□□□ -0.04
Pdgfra-208ENSMUST00000202681 Rtl1Q7M732 1744 aa14.73□□□□□ -0.05
Pdgfra-208ENSMUST00000202681 Ccdc180J3QNE4 1664 aa14.58□□□□□ -0.07
Pdgfra-208ENSMUST00000202681 Mapk8ip2Q9ERE9 830 aa14.56□□□□□ -0.08
Pdgfra-208ENSMUST00000202681 Acin1Q9JIX8 1338 aaKnown RBP14.52□□□□□ -0.09
Pdgfra-208ENSMUST00000202681 Rhox8Q6VSS7 320 aa14.47□□□□□ -0.09
Pdgfra-208ENSMUST00000202681 Kcna4Q61423 654 aa14.44□□□□□ -0.1
Pdgfra-208ENSMUST00000202681 Pcgf6Q99NA9 353 aa14.32□□□□□ -0.12
Pdgfra-208ENSMUST00000202681 ScribQ80U72 1612 aa14.31□□□□□ -0.12
Pdgfra-208ENSMUST00000202681 Plppr3Q7TPB0 716 aa14.3□□□□□ -0.12
Pdgfra-208ENSMUST00000202681 Ppargc1bQ8VHJ7 1014 aa14.1□□□□□ -0.15
Pdgfra-208ENSMUST00000202681 Ehmt2Q9Z148 1263 aaKnown RBP14.03□□□□□ -0.16
Pdgfra-208ENSMUST00000202681 Dcaf1Q80TR8 1506 aa14□□□□□ -0.17
Pdgfra-208ENSMUST00000202681 Zcchc6Q5BLK4 1491 aaKnown RBP14□□□□□ -0.17
Pdgfra-208ENSMUST00000202681 Phf23Q8BSN5 401 aa13.97□□□□□ -0.17
Pdgfra-208ENSMUST00000202681 Kdm5dQ62240 1548 aa13.93□□□□□ -0.18
Pdgfra-208ENSMUST00000202681 Trim41Q5NCC3 630 aa13.89□□□□□ -0.19
Pdgfra-208ENSMUST00000202681 Supt5hO55201 1082 aaKnown RBP13.86□□□□□ -0.19
Pdgfra-208ENSMUST00000202681 Neurod1Q60867 357 aa13.84□□□□□ -0.19
Pdgfra-208ENSMUST00000202681 Las1lA2BE28 776 aaKnown RBP13.78□□□□□ -0.2
Pdgfra-208ENSMUST00000202681 Rb1cc1Q9ESK9 1588 aa13.77□□□□□ -0.21
Pdgfra-208ENSMUST00000202681 HrcG5E8J6 738 aa13.74□□□□□ -0.21
Pdgfra-208ENSMUST00000202681 NacadQ5SWP3 1504 aa13.72□□□□□ -0.21
Pdgfra-208ENSMUST00000202681 1700123L14RikQ3V2K7 440 aa13.55□□□□□ -0.24
Pdgfra-208ENSMUST00000202681 Myt1Q8CFC2 1127 aa13.54□□□□□ -0.24
Pdgfra-208ENSMUST00000202681 Ccdc136Q3TVA9 1136 aa13.52□□□□□ -0.24
Pdgfra-208ENSMUST00000202681 Baz1aO88379 1555 aa13.49□□□□□ -0.25
Pdgfra-208ENSMUST00000202681 Sycp2Q9CUU3 1500 aa13.48□□□□□ -0.25
Pdgfra-208ENSMUST00000202681 CenpbP27790 599 aa13.48□□□□□ -0.25
Pdgfra-208ENSMUST00000202681 Gab3Q8BSM5 595 aa13.45□□□□□ -0.26
Pdgfra-208ENSMUST00000202681 Anks4bQ8K3X6 423 aa13.42□□□□□ -0.26
Pdgfra-208ENSMUST00000202681 Csrnp3P59055 597 aa13.39□□□□□ -0.27
Pdgfra-208ENSMUST00000202681 Zeb1Q64318 1117 aa13.36□□□□□ -0.27
Pdgfra-208ENSMUST00000202681 Cngb1E1AZ71 1325 aa13.34□□□□□ -0.27
Pdgfra-208ENSMUST00000202681 BicraF8VPZ9 1578 aa13.34□□□□□ -0.27
Pdgfra-208ENSMUST00000202681 Sall2Q9QX96 1004 aa13.3□□□□□ -0.28
Pdgfra-208ENSMUST00000202681 Aplp2Q06335 707 aa13.27□□□□□ -0.29
Pdgfra-208ENSMUST00000202681 NefmP08553 848 aa13.26□□□□□ -0.29
Pdgfra-208ENSMUST00000202681 DiexfQ8BTT6 772 aaKnown RBP13.23□□□□□ -0.29
Pdgfra-208ENSMUST00000202681 Cecr2E9Q2Z1 1453 aa13.18□□□□□ -0.3
Pdgfra-208ENSMUST00000202681 Cep164Q5DU05 1446 aa13.17□□□□□ -0.3
Pdgfra-208ENSMUST00000202681 Senp3Q9EP97 568 aaKnown RBP13.16□□□□□ -0.3
Pdgfra-208ENSMUST00000202681 Smarca2Q6DIC0 1577 aa13.16□□□□□ -0.3
Pdgfra-208ENSMUST00000202681 Bcl11aQ9QYE3 773 aa13.06□□□□□ -0.32
Pdgfra-208ENSMUST00000202681 Crybg2B7ZCC2 1516 aa13.06□□□□□ -0.32
Pdgfra-208ENSMUST00000202681 Mier1Q5UAK0 511 aa13.06□□□□□ -0.32
Pdgfra-208ENSMUST00000202681 Cdk11bP24788 784 aaKnown RBP13.05□□□□□ -0.32
Pdgfra-208ENSMUST00000202681 Fam71e1A1L3C1 212 aa13.01□□□□□ -0.33
Pdgfra-208ENSMUST00000202681 Nop58Q6DFW4 536 aaKnown RBP13□□□□□ -0.33
Pdgfra-208ENSMUST00000202681 Gm38655A0A286YDK6 273 aa12.96□□□□□ -0.34
Pdgfra-208ENSMUST00000202681 Wdr66E9Q743 1299 aa12.93□□□□□ -0.34
Pdgfra-208ENSMUST00000202681 Aebp2Q9Z248 504 aaKnown RBP12.91□□□□□ -0.34
Pdgfra-208ENSMUST00000202681 ClspnQ80YR7 1315 aa12.9□□□□□ -0.34
Pdgfra-208ENSMUST00000202681 Synj1Q8CHC4 1574 aa12.9□□□□□ -0.34
Pdgfra-208ENSMUST00000202681 Esf1Q3V1V3 845 aaKnown RBP12.86□□□□□ -0.35
Pdgfra-208ENSMUST00000202681 Smarca4Q3TKT4 1613 aaKnown RBP12.82□□□□□ -0.36
Pdgfra-208ENSMUST00000202681 CftrP26361 1476 aa12.79□□□□□ -0.36
Pdgfra-208ENSMUST00000202681 Ttbk1Q6PCN3 1308 aa12.79□□□□□ -0.36
Pdgfra-208ENSMUST00000202681 Brd4Q9ESU6 1400 aaKnown RBP12.79□□□□□ -0.36
Pdgfra-208ENSMUST00000202681 Dmrt2Q8BG36 561 aa12.77□□□□□ -0.37
Pdgfra-208ENSMUST00000202681 Rsf1E9PWW9 1441 aaKnown RBP12.75□□□□□ -0.37
Pdgfra-208ENSMUST00000202681 Iqgap2Q3UQ44 1575 aa12.74□□□□□ -0.37
Pdgfra-208ENSMUST00000202681 PrkcshO08795 521 aa12.71□□□□□ -0.38
Pdgfra-208ENSMUST00000202681 Prdm10Q3UTQ7 1184 aa12.7□□□□□ -0.38
Pdgfra-208ENSMUST00000202681 Dnajc5bQ9CQ94 199 aa12.7□□□□□ -0.38
Pdgfra-208ENSMUST00000202681 Arid3aQ62431 601 aa12.69□□□□□ -0.38
Pdgfra-208ENSMUST00000202681 Atad2bE9Q166 1460 aaKnown RBP12.69□□□□□ -0.38
Pdgfra-208ENSMUST00000202681 Slc4a1apE9PX68 744 aa12.68□□□□□ -0.38
Pdgfra-208ENSMUST00000202681 Pds5bQ4VA53 1446 aaKnown RBP12.68□□□□□ -0.38
Pdgfra-208ENSMUST00000202681 Cttnbp2B9EJA2 1648 aa12.67□□□□□ -0.38
Pdgfra-208ENSMUST00000202681 SafbD3YXK2 937 aaKnown RBP12.64□□□□□ -0.39
Pdgfra-208ENSMUST00000202681 Prdm16A2A935 1275 aa12.64□□□□□ -0.39
Pdgfra-208ENSMUST00000202681 Tnnt3Q9QZ47 272 aa12.64□□□□□ -0.39
Pdgfra-208ENSMUST00000202681 Hnrnpul2Q00PI9 745 aaKnown RBP12.63□□□□□ -0.39
Pdgfra-208ENSMUST00000202681 Ccdc88bQ4QRL3 1481 aa12.63□□□□□ -0.39
Pdgfra-208ENSMUST00000202681 Ifnlr1Q8CGK5 535 aa12.61□□□□□ -0.39
Pdgfra-208ENSMUST00000202681 Golga3P55937 1487 aa12.6□□□□□ -0.39
Pdgfra-208ENSMUST00000202681 ArxO35085 564 aa12.59□□□□□ -0.39
Pdgfra-208ENSMUST00000202681 TonslQ6NZL6 1363 aa12.59□□□□□ -0.39
Pdgfra-208ENSMUST00000202681 UbtfP25976 765 aaKnown RBP12.58□□□□□ -0.4
Pdgfra-208ENSMUST00000202681 Frmpd1A2AKB4 1549 aa12.57□□□□□ -0.4
Pdgfra-208ENSMUST00000202681 Cc2d2aQ8CFW7 1633 aa12.56□□□□□ -0.4
Pdgfra-208ENSMUST00000202681 Ercc6F8VPZ5 1481 aa12.52□□□□□ -0.4
Pdgfra-208ENSMUST00000202681 Anp32aO35381 247 aa12.52□□□□□ -0.41
Pdgfra-208ENSMUST00000202681 Il27Q8K3I6 234 aa12.52□□□□□ -0.41
Pdgfra-208ENSMUST00000202681 Wdr62Q3U3T8 1523 aa12.51□□□□□ -0.41
Pdgfra-208ENSMUST00000202681 Rtl5Q5DTT4 599 aa12.51□□□□□ -0.41
Pdgfra-208ENSMUST00000202681 Amer1Q7TS75 1132 aa12.46□□□□□ -0.41
Pdgfra-208ENSMUST00000202681 Thoc2B1AZI6 1594 aaKnown RBP12.46□□□□□ -0.41
Pdgfra-208ENSMUST00000202681 Top2bQ64511 1612 aa12.46□□□□□ -0.42
Pdgfra-208ENSMUST00000202681 Unc13aQ4KUS2 1712 aa12.44□□□□□ -0.42
Pdgfra-208ENSMUST00000202681 Ap3b1Q9Z1T1 1105 aa12.41□□□□□ -0.42
Pdgfra-208ENSMUST00000202681 Taok2Q6ZQ29 1240 aa12.4□□□□□ -0.42
Pdgfra-208ENSMUST00000202681 Kif15Q6P9L6 1387 aa12.39□□□□□ -0.43
Retrieved 100 of 22,080 RNA–protein pairs in 12.9 ms