RNA–Protein interactions for RNA: ENSMUST00000185852.6

Msh3-202, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Msh3, Length 3,946 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-202ENSMUST00000185852 Rab11fip3Q8CHD8 1047 aa13.24□□□□□ -0.29
Msh3-202ENSMUST00000185852 Ccdc171E9Q1U1 1324 aa13.24□□□□□ -0.29
Msh3-202ENSMUST00000185852 Mast1Q9R1L5 1570 aa13.24□□□□□ -0.29
Msh3-202ENSMUST00000185852 Prkar2bP31324 416 aa13.23□□□□□ -0.29
Msh3-202ENSMUST00000185852 Ankib1Q6ZPS6 1085 aa13.23□□□□□ -0.29
Msh3-202ENSMUST00000185852 Ppip5k1A2ARP1 1436 aa13.23□□□□□ -0.29
Msh3-202ENSMUST00000185852 CastP51125 788 aa13.23□□□□□ -0.29
Msh3-202ENSMUST00000185852 PsapQ61207 557 aaKnown RBP13.23□□□□□ -0.29
Msh3-202ENSMUST00000185852 Nlgn1Q99K10 843 aa13.23□□□□□ -0.29
Msh3-202ENSMUST00000185852 PalldQ9ET54 1408 aa13.22□□□□□ -0.29
Msh3-202ENSMUST00000185852 Aifm3Q3TY86 605 aa13.22□□□□□ -0.29
Msh3-202ENSMUST00000185852 Nol11Q8BJW5 723 aaKnown RBP13.22□□□□□ -0.29
Msh3-202ENSMUST00000185852 Gnai2P08752 355 aaKnown RBP13.22□□□□□ -0.29
Msh3-202ENSMUST00000185852 Slc39a6Q8C145 765 aa13.22□□□□□ -0.29
Msh3-202ENSMUST00000185852 4930572O03RikQ8C5Y0 211 aa13.21□□□□□ -0.29
Msh3-202ENSMUST00000185852 Kif18aQ91WD7 886 aa13.21□□□□□ -0.29
Msh3-202ENSMUST00000185852 Smc4Q8CG47 1286 aa13.21□□□□□ -0.3
Msh3-202ENSMUST00000185852 Cyp46a1Q9WVK8 500 aa13.21□□□□□ -0.3
Msh3-202ENSMUST00000185852 Zap70P43404 618 aa13.2□□□□□ -0.3
Msh3-202ENSMUST00000185852 Talpid3E9PV87 1520 aa13.2□□□□□ -0.3
Msh3-202ENSMUST00000185852 Anapc15P60007 132 aa13.2□□□□□ -0.3
Msh3-202ENSMUST00000185852 CalcaP70160 136 aa13.2□□□□□ -0.3
Msh3-202ENSMUST00000185852 Mical1Q8VDP3 1048 aa13.2□□□□□ -0.3
Msh3-202ENSMUST00000185852 Synj2Q9D2G5 1434 aa13.2□□□□□ -0.3
Msh3-202ENSMUST00000185852 Clcn1Q64347 994 aa13.2□□□□□ -0.3
Msh3-202ENSMUST00000185852 Smim5Q8BT42 78 aa13.2□□□□□ -0.3
Msh3-202ENSMUST00000185852 Nphp1Q9QY53 687 aa13.2□□□□□ -0.3
Msh3-202ENSMUST00000185852 Erbb3Q61526 1339 aa13.19□□□□□ -0.3
Msh3-202ENSMUST00000185852 Cdc42bpaQ3UU96 1719 aa13.19□□□□□ -0.3
Msh3-202ENSMUST00000185852 Eno4Q8C042 619 aa13.19□□□□□ -0.3
Msh3-202ENSMUST00000185852 Slc5a4bQ91ZP4 660 aa13.19□□□□□ -0.3
Msh3-202ENSMUST00000185852 Tnpo1Q8BFY9 898 aaKnown RBP13.19□□□□□ -0.3
Msh3-202ENSMUST00000185852 Aldh1l1Q8R0Y6 902 aa13.19□□□□□ -0.3
Msh3-202ENSMUST00000185852 Babam1Q3UI43 333 aa13.18□□□□□ -0.3
Msh3-202ENSMUST00000185852 Kif14L0N7N1 1674 aaKnown RBP13.18□□□□□ -0.3
Msh3-202ENSMUST00000185852 Kdm5cP41230 1554 aa13.18□□□□□ -0.3
Msh3-202ENSMUST00000185852 Tom1O88746 492 aa13.18□□□□□ -0.3
Msh3-202ENSMUST00000185852 Ppp2r3aB2RXC8 1150 aa13.17□□□□□ -0.3
Msh3-202ENSMUST00000185852 Eif3bQ8JZQ9 803 aaKnown RBP13.17□□□□□ -0.3
Msh3-202ENSMUST00000185852 OptnQ8K3K8 584 aa13.17□□□□□ -0.3
Msh3-202ENSMUST00000185852 Efcab6Q6P1E8 1516 aa13.17□□□□□ -0.3
Msh3-202ENSMUST00000185852 Abl1P00520 1123 aa13.17□□□□□ -0.3
Msh3-202ENSMUST00000185852 Tfip11Q9ERA6 838 aaKnown RBP13.17□□□□□ -0.3
Msh3-202ENSMUST00000185852 Kif1bQ60575 1816 aaKnown RBP13.17□□□□□ -0.3
Msh3-202ENSMUST00000185852 Cgnl1Q6AW69 1298 aa13.17□□□□□ -0.3
Msh3-202ENSMUST00000185852 MvpQ9EQK5 861 aa13.16□□□□□ -0.3
Msh3-202ENSMUST00000185852 CarsQ9ER72 831 aaKnown RBP13.16□□□□□ -0.3
Msh3-202ENSMUST00000185852 Setd1bQ8CFT2 1985 aa13.16□□□□□ -0.3
Msh3-202ENSMUST00000185852 Hoxc9P09633 260 aa13.16□□□□□ -0.3
Msh3-202ENSMUST00000185852 Casc1Q6TDU8 730 aa13.16□□□□□ -0.3
Msh3-202ENSMUST00000185852 Ppp1r42Q8R1Z4 357 aa13.16□□□□□ -0.3
Msh3-202ENSMUST00000185852 Rapgef3Q8VCC8 918 aa13.16□□□□□ -0.3
Msh3-202ENSMUST00000185852 P2rx7Q9Z1M0 595 aa13.16□□□□□ -0.3
Msh3-202ENSMUST00000185852 Duxf3A0A0N4SV92 674 aa13.16□□□□□ -0.3
Msh3-202ENSMUST00000185852 Dhx16G3X8X0 1044 aaKnown RBP13.16□□□□□ -0.3
Msh3-202ENSMUST00000185852 Ccnl1Q52KE7 532 aaKnown RBP13.15□□□□□ -0.3
Msh3-202ENSMUST00000185852 Ltv1Q6NSQ7 470 aaKnown RBP13.15□□□□□ -0.3
Msh3-202ENSMUST00000185852 Atl3Q91YH5 541 aa13.15□□□□□ -0.3
Msh3-202ENSMUST00000185852 Trim44Q9QXA7 346 aa13.15□□□□□ -0.3
Msh3-202ENSMUST00000185852 Jakmip1Q8BVL9 626 aa13.15□□□□□ -0.3
Msh3-202ENSMUST00000185852 Rrs1Q9CYH6 365 aaKnown RBP13.15□□□□□ -0.3
Msh3-202ENSMUST00000185852 Stard3nlQ9DCI3 235 aa13.15□□□□□ -0.3
Msh3-202ENSMUST00000185852 Zbtb45Q52KG4 520 aa13.14□□□□□ -0.31
Msh3-202ENSMUST00000185852 Nphp4P59240 1425 aa13.14□□□□□ -0.31
Msh3-202ENSMUST00000185852 Soga3Q6NZL0 945 aa13.14□□□□□ -0.31
Msh3-202ENSMUST00000185852 Nos1Q9Z0J4 1429 aa13.13□□□□□ -0.31
Msh3-202ENSMUST00000185852 Myo3aQ8K3H5 1613 aa13.13□□□□□ -0.31
Msh3-202ENSMUST00000185852 Plekhd1B2RPU2 505 aa13.13□□□□□ -0.31
Msh3-202ENSMUST00000185852 Vamp4O70480 141 aa13.13□□□□□ -0.31
Msh3-202ENSMUST00000185852 GpkowQ56A08 488 aa13.13□□□□□ -0.31
Msh3-202ENSMUST00000185852 NexnQ7TPW1 607 aa13.13□□□□□ -0.31
Msh3-202ENSMUST00000185852 Zmym4A2A791 1549 aaKnown RBP13.13□□□□□ -0.31
Msh3-202ENSMUST00000185852 Ppfia3P60469 1194 aa13.13□□□□□ -0.31
Msh3-202ENSMUST00000185852 Map3k2Q61083 619 aa13.13□□□□□ -0.31
Msh3-202ENSMUST00000185852 Fkbp5Q64378 456 aa13.13□□□□□ -0.31
Msh3-202ENSMUST00000185852 Ell2Q3UKU1 639 aa13.13□□□□□ -0.31
Msh3-202ENSMUST00000185852 Gm16486A0A1D5RMD1 1434 aa13.13□□□□□ -0.31
Msh3-202ENSMUST00000185852 Dot1lQ6XZL8 1540 aa13.12□□□□□ -0.31
Msh3-202ENSMUST00000185852 Prkab2Q6PAM0 271 aa13.12□□□□□ -0.31
Msh3-202ENSMUST00000185852 Bcar3Q9QZK2 820 aa13.12□□□□□ -0.31
Msh3-202ENSMUST00000185852 Znf428Q8C1M2 176 aa13.11□□□□□ -0.31
Msh3-202ENSMUST00000185852 Psrc1Q9D0P7 329 aa13.11□□□□□ -0.31
Msh3-202ENSMUST00000185852 FanclQ9CR14 375 aa13.11□□□□□ -0.31
Msh3-202ENSMUST00000185852 Tulp4Q9JIL5 1547 aa13.11□□□□□ -0.31
Msh3-202ENSMUST00000185852 SlkO54988 1233 aa13.11□□□□□ -0.31
Msh3-202ENSMUST00000185852 Exoc5Q3TPX4 708 aa13.11□□□□□ -0.31
Msh3-202ENSMUST00000185852 GptQ8QZR5 496 aa13.11□□□□□ -0.31
Msh3-202ENSMUST00000185852 Kank1E9Q238 1360 aa13.11□□□□□ -0.31
Msh3-202ENSMUST00000185852 Col17a1Q07563 1470 aa13.1□□□□□ -0.31
Msh3-202ENSMUST00000185852 AU019823E9PUQ3 292 aa13.1□□□□□ -0.31
Msh3-202ENSMUST00000185852 Pa2g4P50580 394 aaKnown RBP13.1□□□□□ -0.31
Msh3-202ENSMUST00000185852 Adam1aQ60813 791 aa13.1□□□□□ -0.31
Msh3-202ENSMUST00000185852 Kdm4aQ8BW72 1064 aa13.1□□□□□ -0.31
Msh3-202ENSMUST00000185852 Flad1Q8R123 492 aa13.1□□□□□ -0.31
Msh3-202ENSMUST00000185852 Zfyve16Q80U44 1528 aa13.1□□□□□ -0.31
Msh3-202ENSMUST00000185852 Slc26a8Q8R0C3 999 aa13.1□□□□□ -0.31
Msh3-202ENSMUST00000185852 Fndc1E9Q043 1732 aa13.1□□□□□ -0.31
Msh3-202ENSMUST00000185852 Robo2Q7TPD3 1470 aa13.1□□□□□ -0.31
Msh3-202ENSMUST00000185852 Qtrt2B8ZXI1 415 aa13.1□□□□□ -0.31
Msh3-202ENSMUST00000185852 PogkQ80TC5 607 aa13.1□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 11.9 ms