RNA–Protein interactions for RNA: ENSMUST00000182047.1

Rnf4-204, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,944 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-204ENSMUST00000182047 Ubr1O70481 1757 aa17.19■□□□□ 0.34
Rnf4-204ENSMUST00000182047 Col14a1Q80X19 1797 aa17.19■□□□□ 0.34
Rnf4-204ENSMUST00000182047 Col16a1Q8BLX7 1580 aa17.18■□□□□ 0.34
Rnf4-204ENSMUST00000182047 Camta1A2A891 1682 aa17.18■□□□□ 0.34
Rnf4-204ENSMUST00000182047 Ankrd50F7BE84 1390 aa17.18■□□□□ 0.34
Rnf4-204ENSMUST00000182047 Mbd3Q9Z2D8 285 aaKnown RBP17.18■□□□□ 0.34
Rnf4-204ENSMUST00000182047 PaskQ8CEE6 1383 aa17.18■□□□□ 0.34
Rnf4-204ENSMUST00000182047 Ciz1Q8VEH2 845 aa17.17■□□□□ 0.34
Rnf4-204ENSMUST00000182047 Znf541Q0GGX2 1363 aa17.17■□□□□ 0.34
Rnf4-204ENSMUST00000182047 Spef2Q8C9J3 1734 aa17.17■□□□□ 0.34
Rnf4-204ENSMUST00000182047 TnikP83510 1323 aa17.17■□□□□ 0.34
Rnf4-204ENSMUST00000182047 Trim30dE9PWL0 497 aa17.17■□□□□ 0.34
Rnf4-204ENSMUST00000182047 Nkx1-2P42580 305 aa17.17■□□□□ 0.34
Rnf4-204ENSMUST00000182047 Map2P20357 1828 aa17.17■□□□□ 0.34
Rnf4-204ENSMUST00000182047 Ttc21aQ8C0S4 1314 aa17.17■□□□□ 0.34
Rnf4-204ENSMUST00000182047 CastP51125 788 aa17.17■□□□□ 0.34
Rnf4-204ENSMUST00000182047 Plcd4Q8K3R3 807 aa17.17■□□□□ 0.34
Rnf4-204ENSMUST00000182047 EspnQ9ET47 871 aa17.17■□□□□ 0.34
Rnf4-204ENSMUST00000182047 Ppp1r3fQ9JIG4 799 aa17.17■□□□□ 0.34
Rnf4-204ENSMUST00000182047 Parp14Q2EMV9 1817 aa17.15■□□□□ 0.34
Rnf4-204ENSMUST00000182047 Evi5lH3BKQ3 813 aa17.15■□□□□ 0.34
Rnf4-204ENSMUST00000182047 Slain2Q8CI08 581 aa17.15■□□□□ 0.34
Rnf4-204ENSMUST00000182047 Armcx1Q9CX83 456 aa17.14■□□□□ 0.33
Rnf4-204ENSMUST00000182047 Trim58Q5NCC9 485 aa17.14■□□□□ 0.33
Rnf4-204ENSMUST00000182047 Dnai1Q8C0M8 701 aa17.14■□□□□ 0.33
Rnf4-204ENSMUST00000182047 Ccdc60Q8C4J0 545 aa17.14■□□□□ 0.33
Rnf4-204ENSMUST00000182047 Kdm2bQ6P1G2 1309 aa17.13■□□□□ 0.33
Rnf4-204ENSMUST00000182047 Tmem2Q5FWI3 1383 aa17.13■□□□□ 0.33
Rnf4-204ENSMUST00000182047 Atp7bQ64446 1462 aa17.13■□□□□ 0.33
Rnf4-204ENSMUST00000182047 Nrxn3Q6P9K9 1571 aa17.13■□□□□ 0.33
Rnf4-204ENSMUST00000182047 NudcO35685 332 aaKnown RBP17.13■□□□□ 0.33
Rnf4-204ENSMUST00000182047 Tmem132eQ6IEE6 982 aa17.13■□□□□ 0.33
Rnf4-204ENSMUST00000182047 Stk31Q99MW1 1018 aa17.13■□□□□ 0.33
Rnf4-204ENSMUST00000182047 Ccne1Q61457 408 aa17.13■□□□□ 0.33
Rnf4-204ENSMUST00000182047 Cdc37l1Q9CZP7 335 aa17.13■□□□□ 0.33
Rnf4-204ENSMUST00000182047 Gm6268A2A3U9 297 aa17.12■□□□□ 0.33
Rnf4-204ENSMUST00000182047 Pip4k2bQ80XI4 416 aa17.12■□□□□ 0.33
Rnf4-204ENSMUST00000182047 Klhdc4Q921I2 584 aa17.12■□□□□ 0.33
Rnf4-204ENSMUST00000182047 Phlpp1Q8CHE4 1687 aa17.12■□□□□ 0.33
Rnf4-204ENSMUST00000182047 Ccdc9Q8VC31 543 aaKnown RBP17.11■□□□□ 0.33
Rnf4-204ENSMUST00000182047 Eif2s2Q99L45 331 aaKnown RBP17.11■□□□□ 0.33
Rnf4-204ENSMUST00000182047 Eya1P97767 591 aa17.1■□□□□ 0.33
Rnf4-204ENSMUST00000182047 Znf330Q922H9 316 aa17.1■□□□□ 0.33
Rnf4-204ENSMUST00000182047 Scn7aB1AYL1 1681 aa17.1■□□□□ 0.33
Rnf4-204ENSMUST00000182047 Fyb1O35601 819 aa17.1■□□□□ 0.33
Rnf4-204ENSMUST00000182047 U2surpQ6NV83 1029 aaKnown RBP17.1■□□□□ 0.33
Rnf4-204ENSMUST00000182047 Mdc1Q5PSV9 1707 aa17.09■□□□□ 0.33
Rnf4-204ENSMUST00000182047 Nectin2P32507 530 aa17.09■□□□□ 0.33
Rnf4-204ENSMUST00000182047 Hoxc9P09633 260 aa17.08■□□□□ 0.33
Rnf4-204ENSMUST00000182047 Znf521Q6KAS7 1311 aa17.08■□□□□ 0.32
Rnf4-204ENSMUST00000182047 Duxf3A0A0N4SV92 674 aa17.08■□□□□ 0.32
Rnf4-204ENSMUST00000182047 Snap23O09044 210 aa17.08■□□□□ 0.32
Rnf4-204ENSMUST00000182047 Fam135bQ9DAI6 1403 aa17.07■□□□□ 0.32
Rnf4-204ENSMUST00000182047 Scn4aQ9ER60 1841 aa17.07■□□□□ 0.32
Rnf4-204ENSMUST00000182047 Hsp90ab1P11499 724 aaKnown RBP17.07■□□□□ 0.32
Rnf4-204ENSMUST00000182047 PtprvP70289 1705 aa17.07■□□□□ 0.32
Rnf4-204ENSMUST00000182047 GnpatP98192 678 aa17.07■□□□□ 0.32
Rnf4-204ENSMUST00000182047 Ddx17Q501J6 650 aaKnown RBP17.07■□□□□ 0.32
Rnf4-204ENSMUST00000182047 TmpoQ61033 693 aaKnown RBP17.07■□□□□ 0.32
Rnf4-204ENSMUST00000182047 Tmco5bQ80X59 307 aa17.06■□□□□ 0.32
Rnf4-204ENSMUST00000182047 Usp16Q99LG0 825 aa17.06■□□□□ 0.32
Rnf4-204ENSMUST00000182047 Gnai1B2RSH2 354 aa17.06■□□□□ 0.32
Rnf4-204ENSMUST00000182047 G3bp1P97855 465 aaKnown RBP17.06■□□□□ 0.32
Rnf4-204ENSMUST00000182047 Nutm1Q8BHP2 1126 aa17.06■□□□□ 0.32
Rnf4-204ENSMUST00000182047 Ak7Q9D2H2 614 aa17.06■□□□□ 0.32
Rnf4-204ENSMUST00000182047 Gnai3Q9DC51 354 aa17.06■□□□□ 0.32
Rnf4-204ENSMUST00000182047 Wdr17E9Q271 1322 aa17.05■□□□□ 0.32
Rnf4-204ENSMUST00000182047 Larp1bA0A0A6YXJ7 370 aaKnown RBP17.05■□□□□ 0.32
Rnf4-204ENSMUST00000182047 Unc13bQ9Z1N9 1602 aa17.05■□□□□ 0.32
Rnf4-204ENSMUST00000182047 Rlbp1Q9Z275 317 aa17.05■□□□□ 0.32
Rnf4-204ENSMUST00000182047 Vamp4O70480 141 aa17.04■□□□□ 0.32
Rnf4-204ENSMUST00000182047 Rapgef3Q8VCC8 918 aa17.04■□□□□ 0.32
Rnf4-204ENSMUST00000182047 Ncapd2Q8K2Z4 1392 aa17.04■□□□□ 0.32
Rnf4-204ENSMUST00000182047 1700019A02RikA0A087WPV9 146 aa17.03■□□□□ 0.32
Rnf4-204ENSMUST00000182047 Pibf1E9Q6K3 756 aa17.03■□□□□ 0.32
Rnf4-204ENSMUST00000182047 Smc5Q8CG46 1101 aaKnown RBP17.03■□□□□ 0.32
Rnf4-204ENSMUST00000182047 TimelessQ9R1X4 1197 aa17.03■□□□□ 0.32
Rnf4-204ENSMUST00000182047 Ggnbp2Q5SV77 696 aa17.02■□□□□ 0.32
Rnf4-204ENSMUST00000182047 Ppm1gQ61074 542 aa17.02■□□□□ 0.32
Rnf4-204ENSMUST00000182047 Plekhm2Q80TQ5 1018 aa17.02■□□□□ 0.32
Rnf4-204ENSMUST00000182047 Ccdc171E9Q1U1 1324 aa17.02■□□□□ 0.32
Rnf4-204ENSMUST00000182047 Amigo3Q8C2S7 508 aa17.02■□□□□ 0.31
Rnf4-204ENSMUST00000182047 Maco1Q7TQE6 664 aaKnown RBP17.01■□□□□ 0.31
Rnf4-204ENSMUST00000182047 TatQ8QZR1 454 aa17.01■□□□□ 0.31
Rnf4-204ENSMUST00000182047 Farp2Q91VS8 1065 aa17.01■□□□□ 0.31
Rnf4-204ENSMUST00000182047 Dnajc10Q9DC23 793 aa17.01■□□□□ 0.31
Rnf4-204ENSMUST00000182047 Nsd3Q6P2L6 1439 aa17■□□□□ 0.31
Rnf4-204ENSMUST00000182047 Prim1P20664 417 aa17■□□□□ 0.31
Rnf4-204ENSMUST00000182047 Ano8Q6PB70 1060 aa17■□□□□ 0.31
Rnf4-204ENSMUST00000182047 Spryd3E9Q9B3 442 aa16.99■□□□□ 0.31
Rnf4-204ENSMUST00000182047 Ncoa4Q5U4H9 625 aa16.99■□□□□ 0.31
Rnf4-204ENSMUST00000182047 Mre11Q61216 706 aa16.99■□□□□ 0.31
Rnf4-204ENSMUST00000182047 Gimap6Q8K349 305 aa16.99■□□□□ 0.31
Rnf4-204ENSMUST00000182047 Amotl2Q8K371 772 aa16.99■□□□□ 0.31
Rnf4-204ENSMUST00000182047 Ipo8Q7TMY7 1010 aa16.98■□□□□ 0.31
Rnf4-204ENSMUST00000182047 KarsQ99MN1 595 aaKnown RBP16.98■□□□□ 0.31
Rnf4-204ENSMUST00000182047 Col18a1P39061 1774 aa16.98■□□□□ 0.31
Rnf4-204ENSMUST00000182047 Nfat5Q9WV30 1534 aa16.98■□□□□ 0.31
Rnf4-204ENSMUST00000182047 Q3UPC7 1272 aa16.97■□□□□ 0.31
Rnf4-204ENSMUST00000182047 Atf3Q60765 181 aa16.97■□□□□ 0.31
Retrieved 100 of 22,080 RNA–protein pairs in 14.5 ms