RNA–Protein interactions for RNA: ENSMUST00000111046.8

Bdnf-206, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,819 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-206ENSMUST00000111046 TatQ8QZR1 454 aa10.88□□□□□ -0.67
Bdnf-206ENSMUST00000111046 HypkQ9CR41 129 aa10.88□□□□□ -0.67
Bdnf-206ENSMUST00000111046 Sos1Q62245 1319 aa10.88□□□□□ -0.67
Bdnf-206ENSMUST00000111046 Nek4Q9Z1J2 792 aa10.88□□□□□ -0.67
Bdnf-206ENSMUST00000111046 MccE9PWI3 1003 aa10.87□□□□□ -0.67
Bdnf-206ENSMUST00000111046 Rfx1P48377 963 aa10.87□□□□□ -0.67
Bdnf-206ENSMUST00000111046 P2rx7Q9Z1M0 595 aa10.87□□□□□ -0.67
Bdnf-206ENSMUST00000111046 Cfap65Q3V0B4 1847 aa10.87□□□□□ -0.67
Bdnf-206ENSMUST00000111046 Gsdma3Q5Y4Y6 464 aa10.87□□□□□ -0.67
Bdnf-206ENSMUST00000111046 Larp1bA0A0A6YXJ7 370 aaKnown RBP10.86□□□□□ -0.67
Bdnf-206ENSMUST00000111046 Hoxb7P09024 217 aa10.86□□□□□ -0.67
Bdnf-206ENSMUST00000111046 CltcQ68FD5 1675 aaKnown RBP10.86□□□□□ -0.67
Bdnf-206ENSMUST00000111046 Ahdc1Q6PAL7 1594 aaKnown RBP10.86□□□□□ -0.67
Bdnf-206ENSMUST00000111046 Hs1bp3Q3TC93 395 aa10.86□□□□□ -0.67
Bdnf-206ENSMUST00000111046 Ankrd50F7BE84 1390 aa10.86□□□□□ -0.67
Bdnf-206ENSMUST00000111046 Rsph6aQ8CDR2 708 aa10.86□□□□□ -0.67
Bdnf-206ENSMUST00000111046 Fam135bQ9DAI6 1403 aa10.85□□□□□ -0.67
Bdnf-206ENSMUST00000111046 Gm10563F6WIE4 79 aa10.85□□□□□ -0.67
Bdnf-206ENSMUST00000111046 Naip7Q9JIB3 1402 aa10.85□□□□□ -0.67
Bdnf-206ENSMUST00000111046 Sptbn5F6UCX4 1208 aa10.85□□□□□ -0.67
Bdnf-206ENSMUST00000111046 Rlbp1Q9Z275 317 aa10.85□□□□□ -0.67
Bdnf-206ENSMUST00000111046 GphnQ8BUV3 769 aaKnown RBP10.84□□□□□ -0.67
Bdnf-206ENSMUST00000111046 Trim44Q9QXA7 346 aa10.84□□□□□ -0.67
Bdnf-206ENSMUST00000111046 Rsph3aQ3UFY4 516 aa10.84□□□□□ -0.67
Bdnf-206ENSMUST00000111046 Slc4a10Q5DTL9 1118 aa10.84□□□□□ -0.67
Bdnf-206ENSMUST00000111046 Ncbp3Q8BZR9 615 aaKnown RBP10.84□□□□□ -0.67
Bdnf-206ENSMUST00000111046 Dnajc5gQ8C632 165 aa10.84□□□□□ -0.67
Bdnf-206ENSMUST00000111046 Q9D2X8 372 aa10.84□□□□□ -0.67
Bdnf-206ENSMUST00000111046 Wwc1Q5SXA9 1104 aa10.83□□□□□ -0.68
Bdnf-206ENSMUST00000111046 Ppp1r9bQ6R891 817 aaKnown RBP10.83□□□□□ -0.68
Bdnf-206ENSMUST00000111046 Klhdc4Q921I2 584 aa10.83□□□□□ -0.68
Bdnf-206ENSMUST00000111046 CarsQ9ER72 831 aaKnown RBP10.83□□□□□ -0.68
Bdnf-206ENSMUST00000111046 Ankrd44B2RXR6 993 aa10.83□□□□□ -0.68
Bdnf-206ENSMUST00000111046 Mcm2P97310 904 aa10.83□□□□□ -0.68
Bdnf-206ENSMUST00000111046 Phlpp2Q8BXA7 1320 aa10.83□□□□□ -0.68
Bdnf-206ENSMUST00000111046 Ttc21aQ8C0S4 1314 aa10.83□□□□□ -0.68
Bdnf-206ENSMUST00000111046 Vamp4O70480 141 aa10.82□□□□□ -0.68
Bdnf-206ENSMUST00000111046 Eif4a2P10630 407 aa10.82□□□□□ -0.68
Bdnf-206ENSMUST00000111046 PplQ9R269 1755 aa10.82□□□□□ -0.68
Bdnf-206ENSMUST00000111046 PtmaP26350 111 aa10.82□□□□□ -0.68
Bdnf-206ENSMUST00000111046 Ccne1Q61457 408 aa10.82□□□□□ -0.68
Bdnf-206ENSMUST00000111046 Dnttip2Q8R2M2 758 aaKnown RBP10.82□□□□□ -0.68
Bdnf-206ENSMUST00000111046 Arhgef28P97433 1693 aa10.82□□□□□ -0.68
Bdnf-206ENSMUST00000111046 Eif2ak4Q9QZ05 1648 aa10.82□□□□□ -0.68
Bdnf-206ENSMUST00000111046 Gcc1Q9D4H2 778 aa10.82□□□□□ -0.68
Bdnf-206ENSMUST00000111046 Ppp1r3fQ9JIG4 799 aa10.82□□□□□ -0.68
Bdnf-206ENSMUST00000111046 Nkx1-2P42580 305 aa10.81□□□□□ -0.68
Bdnf-206ENSMUST00000111046 Chd2E9PZM4 1827 aaKnown RBP10.81□□□□□ -0.68
Bdnf-206ENSMUST00000111046 Cyp46a1Q9WVK8 500 aa10.81□□□□□ -0.68
Bdnf-206ENSMUST00000111046 Trim28Q62318 834 aa10.8□□□□□ -0.68
Bdnf-206ENSMUST00000111046 Gnai2P08752 355 aaKnown RBP10.8□□□□□ -0.68
Bdnf-206ENSMUST00000111046 Tmc1Q8R4P5 757 aa10.8□□□□□ -0.68
Bdnf-206ENSMUST00000111046 PtmsQ9D0J8 101 aaKnown RBP10.8□□□□□ -0.68
Bdnf-206ENSMUST00000111046 AU019823E9PUQ3 292 aa10.79□□□□□ -0.68
Bdnf-206ENSMUST00000111046 Aplp1Q03157 653 aa10.79□□□□□ -0.68
Bdnf-206ENSMUST00000111046 Brpf1B2RRD7 1212 aa10.79□□□□□ -0.68
Bdnf-206ENSMUST00000111046 Cfdp1O88271 295 aaKnown RBP10.79□□□□□ -0.68
Bdnf-206ENSMUST00000111046 Pde3bQ61409 1100 aa10.79□□□□□ -0.68
Bdnf-206ENSMUST00000111046 Gimap6Q8K349 305 aa10.79□□□□□ -0.68
Bdnf-206ENSMUST00000111046 Rtn4Q99P72 1162 aaKnown RBP10.79□□□□□ -0.68
Bdnf-206ENSMUST00000111046 Plekhg1F6S200 1446 aa10.79□□□□□ -0.68
Bdnf-206ENSMUST00000111046 KdrP35918 1367 aa10.79□□□□□ -0.68
Bdnf-206ENSMUST00000111046 Fmnl2A2APV2 1086 aa10.79□□□□□ -0.68
Bdnf-206ENSMUST00000111046 Casq1O09165 405 aa10.79□□□□□ -0.68
Bdnf-206ENSMUST00000111046 Prkar2bP31324 416 aa10.79□□□□□ -0.68
Bdnf-206ENSMUST00000111046 Zmym3Q9JLM4 1370 aa10.78□□□□□ -0.68
Bdnf-206ENSMUST00000111046 Abca14E9Q8F8 1683 aa10.78□□□□□ -0.68
Bdnf-206ENSMUST00000111046 Gm10471E9Q1C7 252 aa10.78□□□□□ -0.68
Bdnf-206ENSMUST00000111046 Bcl2l13P59017 434 aa10.78□□□□□ -0.68
Bdnf-206ENSMUST00000111046 Cep170bQ80U49 1574 aa10.78□□□□□ -0.68
Bdnf-206ENSMUST00000111046 Chmp7Q8R1T1 451 aa10.78□□□□□ -0.68
Bdnf-206ENSMUST00000111046 Med14A2ABV5 1459 aaKnown RBP10.78□□□□□ -0.68
Bdnf-206ENSMUST00000111046 NktrP30415 1453 aa10.78□□□□□ -0.68
Bdnf-206ENSMUST00000111046 HdgfP51859 237 aaKnown RBP10.77□□□□□ -0.68
Bdnf-206ENSMUST00000111046 Nphp1Q9QY53 687 aa10.77□□□□□ -0.68
Bdnf-206ENSMUST00000111046 Tmem94Q7TSH8 1360 aa10.77□□□□□ -0.69
Bdnf-206ENSMUST00000111046 Hmox1P14901 289 aa10.77□□□□□ -0.69
Bdnf-206ENSMUST00000111046 Stk11ipQ3TAA7 1072 aa10.77□□□□□ -0.69
Bdnf-206ENSMUST00000111046 Tbc1d32Q3URV1 1296 aa10.77□□□□□ -0.69
Bdnf-206ENSMUST00000111046 Frmpd2A0A140LI67 1392 aa10.77□□□□□ -0.69
Bdnf-206ENSMUST00000111046 Astn2Q80Z10 1352 aa10.77□□□□□ -0.69
Bdnf-206ENSMUST00000111046 Zc3h13E9Q784 1729 aaKnown RBP10.77□□□□□ -0.69
Bdnf-206ENSMUST00000111046 Fkbp4P30416 458 aa10.77□□□□□ -0.69
Bdnf-206ENSMUST00000111046 Cavin2Q63918 418 aaKnown RBP10.77□□□□□ -0.69
Bdnf-206ENSMUST00000111046 Tfip11Q9ERA6 838 aaKnown RBP10.77□□□□□ -0.69
Bdnf-206ENSMUST00000111046 Ercc6l2Q9JIM3 1537 aa10.77□□□□□ -0.69
Bdnf-206ENSMUST00000111046 Evi5lH3BKQ3 813 aa10.76□□□□□ -0.69
Bdnf-206ENSMUST00000111046 Srgap3Q812A2 1099 aa10.76□□□□□ -0.69
Bdnf-206ENSMUST00000111046 Nwd1A6H603 1563 aa10.76□□□□□ -0.69
Bdnf-206ENSMUST00000111046 Zkscan2G3X952 960 aa10.76□□□□□ -0.69
Bdnf-206ENSMUST00000111046 Tceal9Q9DD24 104 aa10.76□□□□□ -0.69
Bdnf-206ENSMUST00000111046 Cwc27Q3TKY6 469 aa10.76□□□□□ -0.69
Bdnf-206ENSMUST00000111046 1700010I14RikQ7TPG0 532 aa10.76□□□□□ -0.69
Bdnf-206ENSMUST00000111046 Smarca5Q91ZW3 1051 aaKnown RBP10.76□□□□□ -0.69
Bdnf-206ENSMUST00000111046 Nsd3Q6P2L6 1439 aa10.75□□□□□ -0.69
Bdnf-206ENSMUST00000111046 Q4VA45 678 aa10.75□□□□□ -0.69
Bdnf-206ENSMUST00000111046 PzpQ61838 1495 aa10.75□□□□□ -0.69
Bdnf-206ENSMUST00000111046 Wdr63B2RY71 923 aa10.75□□□□□ -0.69
Bdnf-206ENSMUST00000111046 Brd1E9PZ26 1189 aaKnown RBP10.75□□□□□ -0.69
Bdnf-206ENSMUST00000111046 MecomP14404 1042 aa10.75□□□□□ -0.69
Retrieved 100 of 22,080 RNA–protein pairs in 20.7 ms