RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 Kcnh5Q920E3 988 aa27.76■■■□□ 2.03
Ccdc88a-202ENSMUST00000109477 Siglec1Q62230 1695 aa27.76■■■□□ 2.03
Ccdc88a-202ENSMUST00000109477 Eif4a2P10630 407 aa27.75■■■□□ 2.03
Ccdc88a-202ENSMUST00000109477 Ccdc30Q8BVF4 654 aa27.75■■■□□ 2.03
Ccdc88a-202ENSMUST00000109477 Parp14Q2EMV9 1817 aa27.75■■■□□ 2.03
Ccdc88a-202ENSMUST00000109477 Robo1O89026 1612 aa27.74■■■□□ 2.03
Ccdc88a-202ENSMUST00000109477 Nfat5Q9WV30 1534 aa27.73■■■□□ 2.03
Ccdc88a-202ENSMUST00000109477 Nid2O88322 1403 aa27.73■■■□□ 2.03
Ccdc88a-202ENSMUST00000109477 Zfp777B9EKF4 885 aa27.72■■■□□ 2.03
Ccdc88a-202ENSMUST00000109477 Arhgef1Q61210 920 aaKnown RBP27.72■■■□□ 2.03
Ccdc88a-202ENSMUST00000109477 Nyap1Q6PFX7 833 aa27.72■■■□□ 2.03
Ccdc88a-202ENSMUST00000109477 Cavin4A2AMM0 362 aa27.71■■■□□ 2.03
Ccdc88a-202ENSMUST00000109477 ZgpatQ8VDM1 511 aa27.71■■■□□ 2.03
Ccdc88a-202ENSMUST00000109477 Uhrf1bp1B2KF50 1429 aa27.7■■■□□ 2.03
Ccdc88a-202ENSMUST00000109477 Cdhr2E9Q7P9 1308 aa27.7■■■□□ 2.03
Ccdc88a-202ENSMUST00000109477 Ttc41Q692V3 1318 aa27.7■■■□□ 2.02
Ccdc88a-202ENSMUST00000109477 Dnajc10Q9DC23 793 aa27.7■■■□□ 2.02
Ccdc88a-202ENSMUST00000109477 Gm21698A0A087WQP8 267 aa27.69■■■□□ 2.02
Ccdc88a-202ENSMUST00000109477 Gm21671G3UY31 267 aa27.69■■■□□ 2.02
Ccdc88a-202ENSMUST00000109477 Q4VA45 678 aa27.69■■■□□ 2.02
Ccdc88a-202ENSMUST00000109477 Lrrc59Q922Q8 307 aaKnown RBP27.69■■■□□ 2.02
Ccdc88a-202ENSMUST00000109477 TatQ8QZR1 454 aa27.68■■■□□ 2.02
Ccdc88a-202ENSMUST00000109477 Txnrd1Q9JMH6 613 aa27.68■■■□□ 2.02
Ccdc88a-202ENSMUST00000109477 Erbb3Q61526 1339 aa27.67■■■□□ 2.02
Ccdc88a-202ENSMUST00000109477 Dusp27Q148W8 1138 aa27.67■■■□□ 2.02
Ccdc88a-202ENSMUST00000109477 Ptpn23Q6PB44 1692 aa27.67■■■□□ 2.02
Ccdc88a-202ENSMUST00000109477 Plekhh1Q80TI1 1356 aa27.67■■■□□ 2.02
Ccdc88a-202ENSMUST00000109477 Fmnl2A2APV2 1086 aa27.67■■■□□ 2.02
Ccdc88a-202ENSMUST00000109477 Hoxc9P09633 260 aa27.67■■■□□ 2.02
Ccdc88a-202ENSMUST00000109477 Ddx54Q8K4L0 874 aaKnown RBP27.67■■■□□ 2.02
Ccdc88a-202ENSMUST00000109477 TnrQ8BYI9 1358 aa27.66■■■□□ 2.02
Ccdc88a-202ENSMUST00000109477 HdgfP51859 237 aaKnown RBP27.66■■■□□ 2.02
Ccdc88a-202ENSMUST00000109477 Ggt6Q6PDE7 497 aa27.66■■■□□ 2.02
Ccdc88a-202ENSMUST00000109477 Sema6bO54951 886 aa27.64■■■□□ 2.02
Ccdc88a-202ENSMUST00000109477 MpripP97434 1024 aa27.64■■■□□ 2.01
Ccdc88a-202ENSMUST00000109477 Slit2Q9R1B9 1521 aa27.64■■■□□ 2.01
Ccdc88a-202ENSMUST00000109477 Card10P58660 1021 aa27.63■■■□□ 2.01
Ccdc88a-202ENSMUST00000109477 Atxn3Q9CVD2 355 aa27.62■■■□□ 2.01
Ccdc88a-202ENSMUST00000109477 Cntnap1O54991 1385 aa27.61■■■□□ 2.01
Ccdc88a-202ENSMUST00000109477 Tmem132eQ6IEE6 982 aa27.61■■■□□ 2.01
Ccdc88a-202ENSMUST00000109477 Swt1Q9DBQ9 907 aa27.61■■■□□ 2.01
Ccdc88a-202ENSMUST00000109477 Calr4Q3TQS0 420 aa27.6■■■□□ 2.01
Ccdc88a-202ENSMUST00000109477 Iqcf3Q9D498 203 aa27.6■■■□□ 2.01
Ccdc88a-202ENSMUST00000109477 Nhsl1Q8CAF4 1587 aa27.6■■■□□ 2.01
Ccdc88a-202ENSMUST00000109477 Ccne1Q61457 408 aa27.59■■■□□ 2.01
Ccdc88a-202ENSMUST00000109477 Stk31Q99MW1 1018 aa27.59■■■□□ 2.01
Ccdc88a-202ENSMUST00000109477 Mcm10Q0VBD2 885 aa27.58■■■□□ 2.01
Ccdc88a-202ENSMUST00000109477 Amotl2Q8K371 772 aa27.58■■■□□ 2.01
Ccdc88a-202ENSMUST00000109477 TnikP83510 1323 aa27.57■■■□□ 2
Ccdc88a-202ENSMUST00000109477 Eya1P97767 591 aa27.56■■■□□ 2
Ccdc88a-202ENSMUST00000109477 Cypt2Q6P924 180 aa27.55■■■□□ 2
Ccdc88a-202ENSMUST00000109477 Nol11Q8BJW5 723 aaKnown RBP27.55■■■□□ 2
Ccdc88a-202ENSMUST00000109477 MypopQ8R4U1 393 aa27.55■■■□□ 2
Ccdc88a-202ENSMUST00000109477 Cabp2Q9JLK4 216 aa27.54■■■□□ 2
Ccdc88a-202ENSMUST00000109477 Rtl5Q5DTT4 599 aa27.53■■■□□ 2
Ccdc88a-202ENSMUST00000109477 Fnbp4Q6ZQ03 1031 aa27.53■■■□□ 2
Ccdc88a-202ENSMUST00000109477 Slx1bQ8BX32 270 aa27.53■■■□□ 2
Ccdc88a-202ENSMUST00000109477 Plin1Q8CGN5 517 aa27.53■■■□□ 2
Ccdc88a-202ENSMUST00000109477 Lrp6O88572 1613 aa27.52■■■□□ 2
Ccdc88a-202ENSMUST00000109477 Csrnp3P59055 597 aa27.52■■■□□ 2
Ccdc88a-202ENSMUST00000109477 Gas2l2Q5SSG4 860 aa27.51■■□□□ 1.99
Ccdc88a-202ENSMUST00000109477 Emilin2Q8K482 1074 aa27.51■■□□□ 1.99
Ccdc88a-202ENSMUST00000109477 Kdm6aO70546 1401 aa27.5■■□□□ 1.99
Ccdc88a-202ENSMUST00000109477 Pard3Q99NH2 1333 aa27.5■■□□□ 1.99
Ccdc88a-202ENSMUST00000109477 Ksr2Q3UVC0 959 aa27.48■■□□□ 1.99
Ccdc88a-202ENSMUST00000109477 Rab11fip3Q8CHD8 1047 aa27.48■■□□□ 1.99
Ccdc88a-202ENSMUST00000109477 Trpm3Q5F4S9 1721 aa27.48■■□□□ 1.99
Ccdc88a-202ENSMUST00000109477 Rwdd1Q9CQK7 243 aa27.47■■□□□ 1.99
Ccdc88a-202ENSMUST00000109477 Ttc21aQ8C0S4 1314 aa27.47■■□□□ 1.99
Ccdc88a-202ENSMUST00000109477 Ankrd50F7BE84 1390 aa27.46■■□□□ 1.99
Ccdc88a-202ENSMUST00000109477 Ccar1Q8CH18 1146 aaKnown RBP27.45■■□□□ 1.99
Ccdc88a-202ENSMUST00000109477 Arfgef2A2A5R2 1792 aa27.45■■□□□ 1.98
Ccdc88a-202ENSMUST00000109477 OptnQ8K3K8 584 aa27.44■■□□□ 1.98
Ccdc88a-202ENSMUST00000109477 CrklP47941 303 aa27.44■■□□□ 1.98
Ccdc88a-202ENSMUST00000109477 RgmbQ7TQ33 436 aa27.44■■□□□ 1.98
Ccdc88a-202ENSMUST00000109477 TmpoQ61033 693 aaKnown RBP27.43■■□□□ 1.98
Ccdc88a-202ENSMUST00000109477 Gsdma3Q5Y4Y6 464 aa27.41■■□□□ 1.98
Ccdc88a-202ENSMUST00000109477 HypkQ9CR41 129 aa27.41■■□□□ 1.98
Ccdc88a-202ENSMUST00000109477 NudcO35685 332 aaKnown RBP27.4■■□□□ 1.98
Ccdc88a-202ENSMUST00000109477 Ahnak2E9PYB0 1738 aaKnown RBP27.4■■□□□ 1.98
Ccdc88a-202ENSMUST00000109477 Rbm25B2RY56 838 aaKnown RBP27.39■■□□□ 1.98
Ccdc88a-202ENSMUST00000109477 Psrc1Q9D0P7 329 aa27.39■■□□□ 1.98
Ccdc88a-202ENSMUST00000109477 Gnai1B2RSH2 354 aa27.38■■□□□ 1.97
Ccdc88a-202ENSMUST00000109477 Gnai3Q9DC51 354 aa27.38■■□□□ 1.97
Ccdc88a-202ENSMUST00000109477 Eno4Q8C042 619 aa27.38■■□□□ 1.97
Ccdc88a-202ENSMUST00000109477 Slit1Q80TR4 1531 aa27.38■■□□□ 1.97
Ccdc88a-202ENSMUST00000109477 Col15a1O35206 1367 aa27.37■■□□□ 1.97
Ccdc88a-202ENSMUST00000109477 TkfcQ8VC30 578 aa27.37■■□□□ 1.97
Ccdc88a-202ENSMUST00000109477 Cdc37l1Q9CZP7 335 aa27.36■■□□□ 1.97
Ccdc88a-202ENSMUST00000109477 Shank2Q80Z38 1476 aa27.36■■□□□ 1.97
Ccdc88a-202ENSMUST00000109477 InhbeO08717 350 aa27.36■■□□□ 1.97
Ccdc88a-202ENSMUST00000109477 CastP51125 788 aa27.35■■□□□ 1.97
Ccdc88a-202ENSMUST00000109477 Zeb2Q9R0G7 1215 aa27.35■■□□□ 1.97
Ccdc88a-202ENSMUST00000109477 Polr3glQ8R0C0 218 aa27.33■■□□□ 1.97
Ccdc88a-202ENSMUST00000109477 FocadA2AKG8 1798 aa27.33■■□□□ 1.97
Ccdc88a-202ENSMUST00000109477 Rtf1A2AQ19 715 aaKnown RBP27.33■■□□□ 1.96
Ccdc88a-202ENSMUST00000109477 Larp1bA0A0A6YXJ7 370 aaKnown RBP27.32■■□□□ 1.96
Ccdc88a-202ENSMUST00000109477 Plekhd1B2RPU2 505 aa27.31■■□□□ 1.96
Ccdc88a-202ENSMUST00000109477 Ccdc129Q14B48 1034 aa27.31■■□□□ 1.96
Ccdc88a-202ENSMUST00000109477 Trim26Q99PN3 545 aa27.31■■□□□ 1.96
Retrieved 100 of 22,080 RNA–protein pairs in 12.7 ms