RNA–Protein interactions for RNA: ENSMUST00000106441.7

Trim47-202, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim47, Length 2,192 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-202ENSMUST00000106441 Ipo4Q8VI75 1082 aa23.42■■□□□ 1.34
Trim47-202ENSMUST00000106441 Znf521Q6KAS7 1311 aa23.42■■□□□ 1.34
Trim47-202ENSMUST00000106441 Ipo8Q7TMY7 1010 aa23.4■■□□□ 1.34
Trim47-202ENSMUST00000106441 TimelessQ9R1X4 1197 aa23.4■■□□□ 1.34
Trim47-202ENSMUST00000106441 Cdk12Q14AX6 1484 aaKnown RBP23.4■■□□□ 1.34
Trim47-202ENSMUST00000106441 Trim58Q5NCC9 485 aa23.39■■□□□ 1.33
Trim47-202ENSMUST00000106441 Mdc1Q5PSV9 1707 aa23.39■■□□□ 1.33
Trim47-202ENSMUST00000106441 Dennd6aQ8BH65 605 aa23.38■■□□□ 1.33
Trim47-202ENSMUST00000106441 Pdlim2Q8R1G6 349 aa23.37■■□□□ 1.33
Trim47-202ENSMUST00000106441 CemipQ8BI06 1361 aa23.37■■□□□ 1.33
Trim47-202ENSMUST00000106441 Gm21190A0A0G2JGJ6 266 aa23.37■■□□□ 1.33
Trim47-202ENSMUST00000106441 Ubr1O70481 1757 aa23.37■■□□□ 1.33
Trim47-202ENSMUST00000106441 Fam135bQ9DAI6 1403 aa23.36■■□□□ 1.33
Trim47-202ENSMUST00000106441 Birc3O08863 600 aa23.36■■□□□ 1.33
Trim47-202ENSMUST00000106441 Tspyl2Q7TQI8 677 aa23.36■■□□□ 1.33
Trim47-202ENSMUST00000106441 Gimap6Q8K349 305 aa23.36■■□□□ 1.33
Trim47-202ENSMUST00000106441 Cald1E9QA15 768 aaKnown RBP23.35■■□□□ 1.33
Trim47-202ENSMUST00000106441 Tom1O88746 492 aa23.35■■□□□ 1.33
Trim47-202ENSMUST00000106441 Scn7aB1AYL1 1681 aa23.35■■□□□ 1.33
Trim47-202ENSMUST00000106441 Ncbp3Q8BZR9 615 aaKnown RBP23.35■■□□□ 1.33
Trim47-202ENSMUST00000106441 Atp7bQ64446 1462 aa23.34■■□□□ 1.33
Trim47-202ENSMUST00000106441 GsdmaQ9EST1 446 aa23.34■■□□□ 1.33
Trim47-202ENSMUST00000106441 Nlgn1Q99K10 843 aa23.33■■□□□ 1.33
Trim47-202ENSMUST00000106441 Trim30dE9PWL0 497 aa23.33■■□□□ 1.32
Trim47-202ENSMUST00000106441 Hoxb7P09024 217 aa23.33■■□□□ 1.32
Trim47-202ENSMUST00000106441 Dixdc1Q80Y83 711 aa23.33■■□□□ 1.32
Trim47-202ENSMUST00000106441 Ak7Q9D2H2 614 aa23.33■■□□□ 1.32
Trim47-202ENSMUST00000106441 Ncapd2Q8K2Z4 1392 aa23.31■■□□□ 1.32
Trim47-202ENSMUST00000106441 Ncoa4Q5U4H9 625 aa23.31■■□□□ 1.32
Trim47-202ENSMUST00000106441 Pank1Q8K4K6 548 aa23.31■■□□□ 1.32
Trim47-202ENSMUST00000106441 Map2P20357 1828 aa23.3■■□□□ 1.32
Trim47-202ENSMUST00000106441 Ccdc183A2AJB1 534 aa23.3■■□□□ 1.32
Trim47-202ENSMUST00000106441 Tet3Q8BG87 1668 aa23.29■■□□□ 1.32
Trim47-202ENSMUST00000106441 Cabp4Q8VHC5 271 aa23.29■■□□□ 1.32
Trim47-202ENSMUST00000106441 Atp10bB1AWN4 1474 aa23.29■■□□□ 1.32
Trim47-202ENSMUST00000106441 Abca15E9PWH4 1668 aa23.29■■□□□ 1.32
Trim47-202ENSMUST00000106441 Hsp90ab1P11499 724 aaKnown RBP23.28■■□□□ 1.32
Trim47-202ENSMUST00000106441 Gas2l2Q5SSG4 860 aa23.28■■□□□ 1.32
Trim47-202ENSMUST00000106441 Zfp142G5E869 1843 aa23.28■■□□□ 1.32
Trim47-202ENSMUST00000106441 Dzip1Q8BMD2 852 aa23.28■■□□□ 1.32
Trim47-202ENSMUST00000106441 FancaQ9JL70 1439 aa23.28■■□□□ 1.32
Trim47-202ENSMUST00000106441 Nckap5lQ6GQX2 1323 aa23.27■■□□□ 1.32
Trim47-202ENSMUST00000106441 Siglec1Q62230 1695 aa23.27■■□□□ 1.32
Trim47-202ENSMUST00000106441 Marf1Q8BJ34 1730 aaKnown RBP23.26■■□□□ 1.31
Trim47-202ENSMUST00000106441 Ppp1r9bQ6R891 817 aaKnown RBP23.26■■□□□ 1.31
Trim47-202ENSMUST00000106441 Cadps2Q8BYR5 1297 aa23.26■■□□□ 1.31
Trim47-202ENSMUST00000106441 PaskQ8CEE6 1383 aa23.26■■□□□ 1.31
Trim47-202ENSMUST00000106441 Duxf3A0A0N4SV92 674 aa23.25■■□□□ 1.31
Trim47-202ENSMUST00000106441 Eif2s2Q99L45 331 aaKnown RBP23.24■■□□□ 1.31
Trim47-202ENSMUST00000106441 Scaf1Q5U4C3 1256 aaKnown RBP23.24■■□□□ 1.31
Trim47-202ENSMUST00000106441 P2rx7Q9Z1M0 595 aa23.24■■□□□ 1.31
Trim47-202ENSMUST00000106441 Nfat5Q9WV30 1534 aa23.23■■□□□ 1.31
Trim47-202ENSMUST00000106441 Kcnh5Q920E3 988 aa23.22■■□□□ 1.31
Trim47-202ENSMUST00000106441 Qtrt2B8ZXI1 415 aa23.21■■□□□ 1.31
Trim47-202ENSMUST00000106441 Ybx3Q9JKB3 361 aaKnown RBP23.21■■□□□ 1.31
Trim47-202ENSMUST00000106441 Bcl9lQ67FY2 1494 aa23.2■■□□□ 1.3
Trim47-202ENSMUST00000106441 Trim28Q62318 834 aa23.2■■□□□ 1.3
Trim47-202ENSMUST00000106441 Ano8Q6PB70 1060 aa23.2■■□□□ 1.3
Trim47-202ENSMUST00000106441 Atxn3Q9CVD2 355 aa23.2■■□□□ 1.3
Trim47-202ENSMUST00000106441 Rlbp1Q9Z275 317 aa23.2■■□□□ 1.3
Trim47-202ENSMUST00000106441 4930567H17RikQ3V0K5 233 aa23.2■■□□□ 1.3
Trim47-202ENSMUST00000106441 Ccar1Q8CH18 1146 aaKnown RBP23.2■■□□□ 1.3
Trim47-202ENSMUST00000106441 Robo1O89026 1612 aa23.2■■□□□ 1.3
Trim47-202ENSMUST00000106441 Ppp2r3aB2RXC8 1150 aa23.19■■□□□ 1.3
Trim47-202ENSMUST00000106441 Atl3Q91YH5 541 aa23.19■■□□□ 1.3
Trim47-202ENSMUST00000106441 Nid2O88322 1403 aa23.19■■□□□ 1.3
Trim47-202ENSMUST00000106441 PtprvP70289 1705 aa23.18■■□□□ 1.3
Trim47-202ENSMUST00000106441 TatQ8QZR1 454 aa23.17■■□□□ 1.3
Trim47-202ENSMUST00000106441 Uhrf1bp1lA2RSJ4 1457 aa23.16■■□□□ 1.3
Trim47-202ENSMUST00000106441 Ppp1r15aP17564 657 aa23.16■■□□□ 1.3
Trim47-202ENSMUST00000106441 Htatsf1Q8BGC0 757 aa23.16■■□□□ 1.3
Trim47-202ENSMUST00000106441 Fmnl2A2APV2 1086 aa23.16■■□□□ 1.3
Trim47-202ENSMUST00000106441 Ksr2Q3UVC0 959 aa23.16■■□□□ 1.3
Trim47-202ENSMUST00000106441 Znf526Q8BI66 675 aa23.16■■□□□ 1.3
Trim47-202ENSMUST00000106441 Slc5a4bQ91ZP4 660 aa23.16■■□□□ 1.3
Trim47-202ENSMUST00000106441 Acsbg1Q99PU5 721 aa23.16■■□□□ 1.3
Trim47-202ENSMUST00000106441 TnrQ8BYI9 1358 aa23.15■■□□□ 1.3
Trim47-202ENSMUST00000106441 Gm21698A0A087WQP8 267 aa23.15■■□□□ 1.3
Trim47-202ENSMUST00000106441 Gm21671G3UY31 267 aa23.15■■□□□ 1.3
Trim47-202ENSMUST00000106441 Ciz1Q8VEH2 845 aa23.14■■□□□ 1.3
Trim47-202ENSMUST00000106441 Tsen2Q6P7W5 460 aa23.14■■□□□ 1.29
Trim47-202ENSMUST00000106441 Pdcl3Q8BVF2 240 aa23.14■■□□□ 1.29
Trim47-202ENSMUST00000106441 U2af1Q9D883 239 aaKnown RBP23.14■■□□□ 1.29
Trim47-202ENSMUST00000106441 Dnajc10Q9DC23 793 aa23.14■■□□□ 1.29
Trim47-202ENSMUST00000106441 Smim5Q8BT42 78 aa23.13■■□□□ 1.29
Trim47-202ENSMUST00000106441 ZgpatQ8VDM1 511 aa23.13■■□□□ 1.29
Trim47-202ENSMUST00000106441 Hs1bp3Q3TC93 395 aa23.12■■□□□ 1.29
Trim47-202ENSMUST00000106441 Rad17Q6NXW6 688 aa23.12■■□□□ 1.29
Trim47-202ENSMUST00000106441 Hoxc9P09633 260 aa23.11■■□□□ 1.29
Trim47-202ENSMUST00000106441 HdgfP51859 237 aaKnown RBP23.11■■□□□ 1.29
Trim47-202ENSMUST00000106441 Polr3glQ8R0C0 218 aa23.11■■□□□ 1.29
Trim47-202ENSMUST00000106441 Bcl2l12Q9D3J3 255 aa23.11■■□□□ 1.29
Trim47-202ENSMUST00000106441 Apaf1O88879 1249 aa23.1■■□□□ 1.29
Trim47-202ENSMUST00000106441 Slc12a5Q91V14 1138 aa23.1■■□□□ 1.29
Trim47-202ENSMUST00000106441 Tmem132eQ6IEE6 982 aa23.1■■□□□ 1.29
Trim47-202ENSMUST00000106441 Ecm2Q5FW85 670 aa23.09■■□□□ 1.29
Trim47-202ENSMUST00000106441 Rsph6aQ8CDR2 708 aa23.09■■□□□ 1.29
Trim47-202ENSMUST00000106441 Cdhr2E9Q7P9 1308 aa23.09■■□□□ 1.29
Trim47-202ENSMUST00000106441 Znf541Q0GGX2 1363 aa23.09■■□□□ 1.29
Trim47-202ENSMUST00000106441 Sptbn5F6UCX4 1208 aa23.08■■□□□ 1.29
Retrieved 100 of 22,080 RNA–protein pairs in 16.3 ms