RNA–Protein interactions for RNA: ENSMUST00000088653.2

Ccdc87-201, Transcript of Coiled-coil domain-containing protein 87, mousemouse

APPRIS P1 BASIC

Gene Ccdc87, Length 3,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87-201ENSMUST00000088653 Tet3Q8BG87 1668 aa13.24□□□□□ -0.29
Ccdc87-201ENSMUST00000088653 Dbr1Q923B1 550 aa13.23□□□□□ -0.29
Ccdc87-201ENSMUST00000088653 Sipa1l2Q80TE4 1722 aa13.23□□□□□ -0.29
Ccdc87-201ENSMUST00000088653 MyclP10166 368 aa13.23□□□□□ -0.29
Ccdc87-201ENSMUST00000088653 G3bp1P97855 465 aaKnown RBP13.23□□□□□ -0.29
Ccdc87-201ENSMUST00000088653 Frmpd2A0A140LI67 1392 aa13.23□□□□□ -0.29
Ccdc87-201ENSMUST00000088653 Tmem94Q7TSH8 1360 aa13.23□□□□□ -0.29
Ccdc87-201ENSMUST00000088653 FancaQ9JL70 1439 aa13.23□□□□□ -0.29
Ccdc87-201ENSMUST00000088653 Iqcf3Q9D498 203 aa13.22□□□□□ -0.29
Ccdc87-201ENSMUST00000088653 Trpm3Q5F4S9 1721 aa13.22□□□□□ -0.29
Ccdc87-201ENSMUST00000088653 Dennd6aQ8BH65 605 aa13.22□□□□□ -0.29
Ccdc87-201ENSMUST00000088653 Ppp1r3fQ9JIG4 799 aa13.22□□□□□ -0.29
Ccdc87-201ENSMUST00000088653 Sos1Q62245 1319 aa13.22□□□□□ -0.29
Ccdc87-201ENSMUST00000088653 Vamp4O70480 141 aa13.22□□□□□ -0.29
Ccdc87-201ENSMUST00000088653 Scaf1Q5U4C3 1256 aaKnown RBP13.22□□□□□ -0.29
Ccdc87-201ENSMUST00000088653 Rad17Q6NXW6 688 aa13.22□□□□□ -0.29
Ccdc87-201ENSMUST00000088653 Nlgn1Q99K10 843 aa13.22□□□□□ -0.29
Ccdc87-201ENSMUST00000088653 Stk31Q99MW1 1018 aa13.22□□□□□ -0.29
Ccdc87-201ENSMUST00000088653 Tns3Q5SSZ5 1440 aa13.22□□□□□ -0.29
Ccdc87-201ENSMUST00000088653 Sox12Q04890 314 aa13.21□□□□□ -0.29
Ccdc87-201ENSMUST00000088653 Ap3b2Q9JME5 1082 aa13.21□□□□□ -0.29
Ccdc87-201ENSMUST00000088653 Nsd3Q6P2L6 1439 aa13.21□□□□□ -0.29
Ccdc87-201ENSMUST00000088653 Phlpp1Q8CHE4 1687 aa13.21□□□□□ -0.29
Ccdc87-201ENSMUST00000088653 MpripP97434 1024 aa13.21□□□□□ -0.3
Ccdc87-201ENSMUST00000088653 Zfp777B9EKF4 885 aa13.2□□□□□ -0.3
Ccdc87-201ENSMUST00000088653 Robo1O89026 1612 aa13.2□□□□□ -0.3
Ccdc87-201ENSMUST00000088653 Adgrb1Q3UHD1 1582 aa13.19□□□□□ -0.3
Ccdc87-201ENSMUST00000088653 Maco1Q7TQE6 664 aaKnown RBP13.19□□□□□ -0.3
Ccdc87-201ENSMUST00000088653 Plekhm2Q80TQ5 1018 aa13.19□□□□□ -0.3
Ccdc87-201ENSMUST00000088653 Hs1bp3Q3TC93 395 aa13.18□□□□□ -0.3
Ccdc87-201ENSMUST00000088653 Nrxn3Q6P9K9 1571 aa13.18□□□□□ -0.3
Ccdc87-201ENSMUST00000088653 Ecm2Q5FW85 670 aa13.18□□□□□ -0.3
Ccdc87-201ENSMUST00000088653 Cavin2Q63918 418 aaKnown RBP13.18□□□□□ -0.3
Ccdc87-201ENSMUST00000088653 Tmem2Q5FWI3 1383 aa13.17□□□□□ -0.3
Ccdc87-201ENSMUST00000088653 KarsQ99MN1 595 aaKnown RBP13.17□□□□□ -0.3
Ccdc87-201ENSMUST00000088653 Q3UPC7 1272 aa13.17□□□□□ -0.3
Ccdc87-201ENSMUST00000088653 Aldh1l1Q8R0Y6 902 aa13.17□□□□□ -0.3
Ccdc87-201ENSMUST00000088653 Atl3Q91YH5 541 aa13.17□□□□□ -0.3
Ccdc87-201ENSMUST00000088653 Ano8Q6PB70 1060 aa13.16□□□□□ -0.3
Ccdc87-201ENSMUST00000088653 Gm21190A0A0G2JGJ6 266 aa13.16□□□□□ -0.3
Ccdc87-201ENSMUST00000088653 Gm6268A2A3U9 297 aa13.16□□□□□ -0.3
Ccdc87-201ENSMUST00000088653 Usp16Q99LG0 825 aa13.16□□□□□ -0.3
Ccdc87-201ENSMUST00000088653 Nckap5lQ6GQX2 1323 aa13.16□□□□□ -0.3
Ccdc87-201ENSMUST00000088653 Arfgef2A2A5R2 1792 aa13.15□□□□□ -0.3
Ccdc87-201ENSMUST00000088653 Cabp4Q8VHC5 271 aa13.15□□□□□ -0.3
Ccdc87-201ENSMUST00000088653 Nfat5Q9WV30 1534 aa13.15□□□□□ -0.3
Ccdc87-201ENSMUST00000088653 Ncapd2Q8K2Z4 1392 aa13.14□□□□□ -0.31
Ccdc87-201ENSMUST00000088653 Eya1P97767 591 aa13.14□□□□□ -0.31
Ccdc87-201ENSMUST00000088653 TmpoQ61033 693 aaKnown RBP13.14□□□□□ -0.31
Ccdc87-201ENSMUST00000088653 Plin1Q8CGN5 517 aa13.14□□□□□ -0.31
Ccdc87-201ENSMUST00000088653 Ahnak2E9PYB0 1738 aaKnown RBP13.14□□□□□ -0.31
Ccdc87-201ENSMUST00000088653 Hoxc9P09633 260 aa13.14□□□□□ -0.31
Ccdc87-201ENSMUST00000088653 MarsQ68FL6 902 aaKnown RBP13.14□□□□□ -0.31
Ccdc87-201ENSMUST00000088653 Slc35g1Q8BY79 368 aa13.14□□□□□ -0.31
Ccdc87-201ENSMUST00000088653 Znf330Q922H9 316 aa13.14□□□□□ -0.31
Ccdc87-201ENSMUST00000088653 Siglec1Q62230 1695 aa13.13□□□□□ -0.31
Ccdc87-201ENSMUST00000088653 Tmc1Q8R4P5 757 aa13.13□□□□□ -0.31
Ccdc87-201ENSMUST00000088653 MvpQ9EQK5 861 aa13.13□□□□□ -0.31
Ccdc87-201ENSMUST00000088653 Wnk3Q80XP9 1757 aa13.13□□□□□ -0.31
Ccdc87-201ENSMUST00000088653 Myo5bP21271 1818 aa13.13□□□□□ -0.31
Ccdc87-201ENSMUST00000088653 Ppp2r3aB2RXC8 1150 aa13.12□□□□□ -0.31
Ccdc87-201ENSMUST00000088653 Nectin2P32507 530 aa13.12□□□□□ -0.31
Ccdc87-201ENSMUST00000088653 Tmco5bQ80X59 307 aa13.12□□□□□ -0.31
Ccdc87-201ENSMUST00000088653 Klhdc4Q921I2 584 aa13.12□□□□□ -0.31
Ccdc87-201ENSMUST00000088653 Dnajc5P60904 198 aa13.12□□□□□ -0.31
Ccdc87-201ENSMUST00000088653 Nkx1-2P42580 305 aa13.12□□□□□ -0.31
Ccdc87-201ENSMUST00000088653 Armcx1Q9CX83 456 aa13.12□□□□□ -0.31
Ccdc87-201ENSMUST00000088653 Ankrd44B2RXR6 993 aa13.11□□□□□ -0.31
Ccdc87-201ENSMUST00000088653 AU019823E9PUQ3 292 aa13.11□□□□□ -0.31
Ccdc87-201ENSMUST00000088653 Ncoa4Q5U4H9 625 aa13.11□□□□□ -0.31
Ccdc87-201ENSMUST00000088653 U2surpQ6NV83 1029 aaKnown RBP13.11□□□□□ -0.31
Ccdc87-201ENSMUST00000088653 Rab11fip3Q8CHD8 1047 aa13.11□□□□□ -0.31
Ccdc87-201ENSMUST00000088653 Ccdc183A2AJB1 534 aa13.11□□□□□ -0.31
Ccdc87-201ENSMUST00000088653 Chmp4bQ9D8B3 224 aaKnown RBP13.1□□□□□ -0.31
Ccdc87-201ENSMUST00000088653 Ccne1Q61457 408 aa13.1□□□□□ -0.31
Ccdc87-201ENSMUST00000088653 Nutm1Q8BHP2 1126 aa13.1□□□□□ -0.31
Ccdc87-201ENSMUST00000088653 MlecQ6ZQI3 291 aaKnown RBP13.1□□□□□ -0.31
Ccdc87-201ENSMUST00000088653 Ipo8Q7TMY7 1010 aa13.1□□□□□ -0.31
Ccdc87-201ENSMUST00000088653 Ak7Q9D2H2 614 aa13.09□□□□□ -0.31
Ccdc87-201ENSMUST00000088653 Rangap1P46061 589 aaKnown RBP13.09□□□□□ -0.31
Ccdc87-201ENSMUST00000088653 Chl1P70232 1209 aa13.09□□□□□ -0.31
Ccdc87-201ENSMUST00000088653 Trim30dE9PWL0 497 aa13.08□□□□□ -0.32
Ccdc87-201ENSMUST00000088653 Cluap1Q8R3P7 413 aa13.08□□□□□ -0.32
Ccdc87-201ENSMUST00000088653 Col18a1P39061 1774 aa13.08□□□□□ -0.32
Ccdc87-201ENSMUST00000088653 Kif24Q6NWW5 1356 aa13.08□□□□□ -0.32
Ccdc87-201ENSMUST00000088653 Wdr17E9Q271 1322 aa13.08□□□□□ -0.32
Ccdc87-201ENSMUST00000088653 Phlpp2Q8BXA7 1320 aa13.08□□□□□ -0.32
Ccdc87-201ENSMUST00000088653 ChgaP26339 463 aaKnown RBP13.08□□□□□ -0.32
Ccdc87-201ENSMUST00000088653 Gimap6Q8K349 305 aa13.08□□□□□ -0.32
Ccdc87-201ENSMUST00000088653 Igsf1Q7TQA1 1317 aa13.08□□□□□ -0.32
Ccdc87-201ENSMUST00000088653 Gli3Q61602 1583 aa13.07□□□□□ -0.32
Ccdc87-201ENSMUST00000088653 Senp3Q9EP97 568 aaKnown RBP13.07□□□□□ -0.32
Ccdc87-201ENSMUST00000088653 Kdm6aO70546 1401 aa13.07□□□□□ -0.32
Ccdc87-201ENSMUST00000088653 Rtf1A2AQ19 715 aaKnown RBP13.07□□□□□ -0.32
Ccdc87-201ENSMUST00000088653 TimelessQ9R1X4 1197 aa13.07□□□□□ -0.32
Ccdc87-201ENSMUST00000088653 4930567H17RikQ3V0K5 233 aa13.06□□□□□ -0.32
Ccdc87-201ENSMUST00000088653 Msh6P54276 1358 aaKnown RBP13.06□□□□□ -0.32
Ccdc87-201ENSMUST00000088653 Fyb1O35601 819 aa13.06□□□□□ -0.32
Ccdc87-201ENSMUST00000088653 Tmem132eQ6IEE6 982 aa13.06□□□□□ -0.32
Ccdc87-201ENSMUST00000088653 HypkQ9CR41 129 aa13.06□□□□□ -0.32
Retrieved 100 of 22,080 RNA–protein pairs in 11.7 ms