RNA–Protein interactions for RNA: ENSMUST00000084885.11

Ubp1-202, Transcript of Upstream-binding protein 1, mousemouse

APPRIS P4 TSL 5 BASIC

Gene Ubp1, Length 3,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1-202ENSMUST00000084885 Zmym4A2A791 1549 aaKnown RBP20.26■□□□□ 0.83
Ubp1-202ENSMUST00000084885 Fhod3Q76LL6 1578 aa20.26■□□□□ 0.83
Ubp1-202ENSMUST00000084885 AnkarA2RT91 1465 aa20.26■□□□□ 0.83
Ubp1-202ENSMUST00000084885 CastP51125 788 aa20.26■□□□□ 0.83
Ubp1-202ENSMUST00000084885 ShprhQ7TPQ3 1674 aa20.25■□□□□ 0.83
Ubp1-202ENSMUST00000084885 Rassf8Q8CJ96 419 aa20.25■□□□□ 0.83
Ubp1-202ENSMUST00000084885 Mbd5B1AYB6 1498 aa20.25■□□□□ 0.83
Ubp1-202ENSMUST00000084885 Nol10Q5RJG1 687 aaKnown RBP20.25■□□□□ 0.83
Ubp1-202ENSMUST00000084885 Sugp2Q8CH09 1067 aa20.25■□□□□ 0.83
Ubp1-202ENSMUST00000084885 Fam83gQ5SWY7 812 aa20.25■□□□□ 0.83
Ubp1-202ENSMUST00000084885 Rapgef3Q8VCC8 918 aa20.24■□□□□ 0.83
Ubp1-202ENSMUST00000084885 PzpQ61838 1495 aa20.23■□□□□ 0.83
Ubp1-202ENSMUST00000084885 Setbp1Q9Z180 1582 aa20.23■□□□□ 0.83
Ubp1-202ENSMUST00000084885 Smg7Q5RJH6 1138 aaKnown RBP20.23■□□□□ 0.83
Ubp1-202ENSMUST00000084885 IbspQ61711 324 aa20.23■□□□□ 0.83
Ubp1-202ENSMUST00000084885 Cwc27Q3TKY6 469 aa20.23■□□□□ 0.83
Ubp1-202ENSMUST00000084885 Jarid2Q62315 1234 aa20.23■□□□□ 0.83
Ubp1-202ENSMUST00000084885 Ipo9Q91YE6 1041 aa20.23■□□□□ 0.83
Ubp1-202ENSMUST00000084885 Smarca5Q91ZW3 1051 aaKnown RBP20.23■□□□□ 0.83
Ubp1-202ENSMUST00000084885 Pknox2Q8BG99 474 aa20.22■□□□□ 0.83
Ubp1-202ENSMUST00000084885 Adamts13Q769J6 1426 aa20.22■□□□□ 0.83
Ubp1-202ENSMUST00000084885 Sh3bp5Q9Z131 463 aa20.22■□□□□ 0.83
Ubp1-202ENSMUST00000084885 Abca9Q8K449 1623 aa20.21■□□□□ 0.83
Ubp1-202ENSMUST00000084885 Pola1P33609 1465 aa20.21■□□□□ 0.83
Ubp1-202ENSMUST00000084885 Q9D2X8 372 aa20.21■□□□□ 0.83
Ubp1-202ENSMUST00000084885 Pprc1Q6NZN1 1644 aa20.21■□□□□ 0.83
Ubp1-202ENSMUST00000084885 Nol11Q8BJW5 723 aaKnown RBP20.21■□□□□ 0.83
Ubp1-202ENSMUST00000084885 Ccdc171E9Q1U1 1324 aa20.2■□□□□ 0.82
Ubp1-202ENSMUST00000084885 Aifm3Q3TY86 605 aa20.2■□□□□ 0.82
Ubp1-202ENSMUST00000084885 Kiaa1107Q80TK0 1369 aa20.2■□□□□ 0.82
Ubp1-202ENSMUST00000084885 Smim5Q8BT42 78 aa20.2■□□□□ 0.82
Ubp1-202ENSMUST00000084885 ApobrQ8VBT6 942 aa20.2■□□□□ 0.82
Ubp1-202ENSMUST00000084885 Hoxc9P09633 260 aa20.19■□□□□ 0.82
Ubp1-202ENSMUST00000084885 Rab11fip3Q8CHD8 1047 aa20.19■□□□□ 0.82
Ubp1-202ENSMUST00000084885 Rfx1P48377 963 aa20.19■□□□□ 0.82
Ubp1-202ENSMUST00000084885 Cog6Q8R3I3 657 aa20.19■□□□□ 0.82
Ubp1-202ENSMUST00000084885 Nek4Q9Z1J2 792 aa20.19■□□□□ 0.82
Ubp1-202ENSMUST00000084885 Stk3Q9JI10 497 aa20.18■□□□□ 0.82
Ubp1-202ENSMUST00000084885 MecomP14404 1042 aa20.18■□□□□ 0.82
Ubp1-202ENSMUST00000084885 Knl1Q66JQ7 1612 aa20.17■□□□□ 0.82
Ubp1-202ENSMUST00000084885 Q8C5K5 320 aa20.17■□□□□ 0.82
Ubp1-202ENSMUST00000084885 Scaf11E9PZM7 1456 aaKnown RBP20.17■□□□□ 0.82
Ubp1-202ENSMUST00000084885 Kank1E9Q238 1360 aa20.16■□□□□ 0.82
Ubp1-202ENSMUST00000084885 Dmrt2Q8BG36 561 aa20.16■□□□□ 0.82
Ubp1-202ENSMUST00000084885 Kif21bQ9QXL1 1668 aa20.16■□□□□ 0.82
Ubp1-202ENSMUST00000084885 TefQ9JLC6 301 aa20.16■□□□□ 0.82
Ubp1-202ENSMUST00000084885 Hmox1P14901 289 aa20.15■□□□□ 0.82
Ubp1-202ENSMUST00000084885 Slc5a1Q8C3K6 665 aa20.15■□□□□ 0.82
Ubp1-202ENSMUST00000084885 OptnQ8K3K8 584 aa20.15■□□□□ 0.82
Ubp1-202ENSMUST00000084885 Srgap3Q812A2 1099 aa20.15■□□□□ 0.82
Ubp1-202ENSMUST00000084885 Q4VA45 678 aa20.14■□□□□ 0.82
Ubp1-202ENSMUST00000084885 Plch2A2AP18 1501 aa20.14■□□□□ 0.82
Ubp1-202ENSMUST00000084885 Ccdc183A2AJB1 534 aa20.14■□□□□ 0.81
Ubp1-202ENSMUST00000084885 Prkar2bP31324 416 aa20.13■□□□□ 0.81
Ubp1-202ENSMUST00000084885 Strn4P58404 760 aa20.13■□□□□ 0.81
Ubp1-202ENSMUST00000084885 SkilQ60665 675 aa20.13■□□□□ 0.81
Ubp1-202ENSMUST00000084885 Pes1Q9EQ61 584 aaKnown RBP20.13■□□□□ 0.81
Ubp1-202ENSMUST00000084885 Atf7ipQ7TT18 1306 aa20.13■□□□□ 0.81
Ubp1-202ENSMUST00000084885 Slc39a6Q8C145 765 aa20.13■□□□□ 0.81
Ubp1-202ENSMUST00000084885 Aldh1l1Q8R0Y6 902 aa20.13■□□□□ 0.81
Ubp1-202ENSMUST00000084885 4930572O03RikQ8C5Y0 211 aa20.12■□□□□ 0.81
Ubp1-202ENSMUST00000084885 Uhrf1bp1lA2RSJ4 1457 aa20.12■□□□□ 0.81
Ubp1-202ENSMUST00000084885 Duxf3A0A0N4SV92 674 aa20.12■□□□□ 0.81
Ubp1-202ENSMUST00000084885 Prex1Q69ZK0 1650 aa20.12■□□□□ 0.81
Ubp1-202ENSMUST00000084885 Vamp4O70480 141 aa20.12■□□□□ 0.81
Ubp1-202ENSMUST00000084885 Sytl4Q9R0Q1 673 aa20.11■□□□□ 0.81
Ubp1-202ENSMUST00000084885 PsapQ61207 557 aaKnown RBP20.11■□□□□ 0.81
Ubp1-202ENSMUST00000084885 Igflr1Q3U4N7 345 aa20.11■□□□□ 0.81
Ubp1-202ENSMUST00000084885 Eno4Q8C042 619 aa20.11■□□□□ 0.81
Ubp1-202ENSMUST00000084885 RereQ80TZ9 1558 aa20.1■□□□□ 0.81
Ubp1-202ENSMUST00000084885 Adgrb3Q80ZF8 1522 aa20.1■□□□□ 0.81
Ubp1-202ENSMUST00000084885 Clcn1Q64347 994 aa20.1■□□□□ 0.81
Ubp1-202ENSMUST00000084885 Zap70P43404 618 aa20.1■□□□□ 0.81
Ubp1-202ENSMUST00000084885 Tom1O88746 492 aa20.09■□□□□ 0.81
Ubp1-202ENSMUST00000084885 Ccdc9Q8VC31 543 aaKnown RBP20.09■□□□□ 0.81
Ubp1-202ENSMUST00000084885 Cep170bQ80U49 1574 aa20.09■□□□□ 0.81
Ubp1-202ENSMUST00000084885 Clasp1Q80TV8 1535 aaKnown RBP20.09■□□□□ 0.81
Ubp1-202ENSMUST00000084885 Bicdl1A0JNT9 577 aa20.09■□□□□ 0.81
Ubp1-202ENSMUST00000084885 Hecw1Q8K4P8 1604 aa20.09■□□□□ 0.81
Ubp1-202ENSMUST00000084885 Gnai2P08752 355 aaKnown RBP20.08■□□□□ 0.81
Ubp1-202ENSMUST00000084885 Ttc19Q8CC21 365 aa20.08■□□□□ 0.81
Ubp1-202ENSMUST00000084885 Kif18aQ91WD7 886 aa20.08■□□□□ 0.81
Ubp1-202ENSMUST00000084885 Tceal9Q9DD24 104 aa20.08■□□□□ 0.81
Ubp1-202ENSMUST00000084885 Slc5a4bQ91ZP4 660 aa20.08■□□□□ 0.81
Ubp1-202ENSMUST00000084885 MvpQ9EQK5 861 aa20.08■□□□□ 0.8
Ubp1-202ENSMUST00000084885 Wdr17E9Q271 1322 aa20.07■□□□□ 0.8
Ubp1-202ENSMUST00000084885 Eif3bQ8JZQ9 803 aaKnown RBP20.06■□□□□ 0.8
Ubp1-202ENSMUST00000084885 Ahdc1Q6PAL7 1594 aaKnown RBP20.06■□□□□ 0.8
Ubp1-202ENSMUST00000084885 Xrn1P97789 1719 aaKnown RBP20.06■□□□□ 0.8
Ubp1-202ENSMUST00000084885 Phactr2B1AVP0 632 aa20.06■□□□□ 0.8
Ubp1-202ENSMUST00000084885 Ankib1Q6ZPS6 1085 aa20.06■□□□□ 0.8
Ubp1-202ENSMUST00000084885 Liat1Q810M6 228 aa20.05■□□□□ 0.8
Ubp1-202ENSMUST00000084885 Tex14Q7M6U3 1450 aa20.05■□□□□ 0.8
Ubp1-202ENSMUST00000084885 CalcaP70160 136 aa20.05■□□□□ 0.8
Ubp1-202ENSMUST00000084885 Nol8Q3UHX0 1147 aaKnown RBP20.05■□□□□ 0.8
Ubp1-202ENSMUST00000084885 PnnO35691 725 aaKnown RBP20.04■□□□□ 0.8
Ubp1-202ENSMUST00000084885 Kiaa1210E9Q0C6 1637 aa20.04■□□□□ 0.8
Ubp1-202ENSMUST00000084885 Hoxb7P09024 217 aa20.04■□□□□ 0.8
Ubp1-202ENSMUST00000084885 FancaQ9JL70 1439 aa20.04■□□□□ 0.8
Ubp1-202ENSMUST00000084885 Usp19Q3UJD6 1360 aa20.04■□□□□ 0.8
Retrieved 100 of 22,080 RNA–protein pairs in 72.3 ms