RNA–Protein interactions for RNA: ENSMUST00000084885.11

Ubp1-202, Transcript of Upstream-binding protein 1, mousemouse

APPRIS P4 TSL 5 BASIC

Gene Ubp1, Length 3,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1-202ENSMUST00000084885 Rhox8Q6VSS7 320 aa30.6■■■□□ 2.49
Ubp1-202ENSMUST00000084885 NischQ80TM9 1593 aa29.78■■■□□ 2.36
Ubp1-202ENSMUST00000084885 Abcc9P70170 1546 aa28.18■■■□□ 2.1
Ubp1-202ENSMUST00000084885 Ccdc136Q3TVA9 1136 aa28.09■■■□□ 2.09
Ubp1-202ENSMUST00000084885 Abcc8B2RUS7 1588 aa27.86■■■□□ 2.05
Ubp1-202ENSMUST00000084885 Gm35339A0A140LHH9 1649 aa27.51■■□□□ 1.99
Ubp1-202ENSMUST00000084885 Ehmt2Q9Z148 1263 aaKnown RBP27.17■■□□□ 1.94
Ubp1-202ENSMUST00000084885 Cngb1E1AZ71 1325 aa27.07■■□□□ 1.92
Ubp1-202ENSMUST00000084885 Esf1Q3V1V3 845 aaKnown RBP27.06■■□□□ 1.92
Ubp1-202ENSMUST00000084885 Gab3Q8BSM5 595 aa26.78■■□□□ 1.88
Ubp1-202ENSMUST00000084885 Trim41Q5NCC3 630 aa26.74■■□□□ 1.87
Ubp1-202ENSMUST00000084885 Zcchc6Q5BLK4 1491 aaKnown RBP26.73■■□□□ 1.87
Ubp1-202ENSMUST00000084885 Myt1lP97500 1187 aa26.09■■□□□ 1.77
Ubp1-202ENSMUST00000084885 Rb1cc1Q9ESK9 1588 aa26.08■■□□□ 1.76
Ubp1-202ENSMUST00000084885 Il27Q8K3I6 234 aa26.06■■□□□ 1.76
Ubp1-202ENSMUST00000084885 Npm2Q80W85 207 aa25.98■■□□□ 1.75
Ubp1-202ENSMUST00000084885 Zeb1Q64318 1117 aa25.96■■□□□ 1.75
Ubp1-202ENSMUST00000084885 Kdm5dQ62240 1548 aa25.89■■□□□ 1.73
Ubp1-202ENSMUST00000084885 NacadQ5SWP3 1504 aa25.86■■□□□ 1.73
Ubp1-202ENSMUST00000084885 ScribQ80U72 1612 aa25.79■■□□□ 1.72
Ubp1-202ENSMUST00000084885 Ccdc180J3QNE4 1664 aa25.75■■□□□ 1.71
Ubp1-202ENSMUST00000084885 HrcG5E8J6 738 aa25.62■■□□□ 1.69
Ubp1-202ENSMUST00000084885 Rtl1Q7M732 1744 aa25.56■■□□□ 1.68
Ubp1-202ENSMUST00000084885 Dcaf1Q80TR8 1506 aa25.5■■□□□ 1.67
Ubp1-202ENSMUST00000084885 Chic1Q8CBW7 227 aa25.5■■□□□ 1.67
Ubp1-202ENSMUST00000084885 Baz1aO88379 1555 aa25.46■■□□□ 1.67
Ubp1-202ENSMUST00000084885 UbtfP25976 765 aaKnown RBP25.35■■□□□ 1.65
Ubp1-202ENSMUST00000084885 Ap3b1Q9Z1T1 1105 aa25.26■■□□□ 1.63
Ubp1-202ENSMUST00000084885 Brd4Q9ESU6 1400 aaKnown RBP25.19■■□□□ 1.62
Ubp1-202ENSMUST00000084885 Rpgrip1Q9EPQ2 1331 aa25.11■■□□□ 1.61
Ubp1-202ENSMUST00000084885 Sycp2Q9CUU3 1500 aa25.09■■□□□ 1.61
Ubp1-202ENSMUST00000084885 Ube2uB1AUC4 352 aa25.05■■□□□ 1.6
Ubp1-202ENSMUST00000084885 Npm1Q61937 292 aaKnown RBP24.98■■□□□ 1.59
Ubp1-202ENSMUST00000084885 Ubl4bQ9CQ84 188 aa24.95■■□□□ 1.58
Ubp1-202ENSMUST00000084885 Cecr2E9Q2Z1 1453 aa24.95■■□□□ 1.58
Ubp1-202ENSMUST00000084885 Acin1Q9JIX8 1338 aaKnown RBP24.82■■□□□ 1.56
Ubp1-202ENSMUST00000084885 Wdr66E9Q743 1299 aa24.8■■□□□ 1.56
Ubp1-202ENSMUST00000084885 Plekhg3Q4VAC9 1341 aa24.77■■□□□ 1.56
Ubp1-202ENSMUST00000084885 Lmod2Q3UHZ5 550 aa24.69■■□□□ 1.54
Ubp1-202ENSMUST00000084885 Rsf1E9PWW9 1441 aaKnown RBP24.65■■□□□ 1.54
Ubp1-202ENSMUST00000084885 Cep164Q5DU05 1446 aa24.62■■□□□ 1.53
Ubp1-202ENSMUST00000084885 Pcgf6Q99NA9 353 aa24.59■■□□□ 1.53
Ubp1-202ENSMUST00000084885 Golga3P55937 1487 aa24.59■■□□□ 1.53
Ubp1-202ENSMUST00000084885 Fam50aQ9WV03 339 aaKnown RBP24.57■■□□□ 1.52
Ubp1-202ENSMUST00000084885 Ppargc1bQ8VHJ7 1014 aa24.56■■□□□ 1.52
Ubp1-202ENSMUST00000084885 Ccdc88bQ4QRL3 1481 aa24.54■■□□□ 1.52
Ubp1-202ENSMUST00000084885 Kif15Q6P9L6 1387 aa24.53■■□□□ 1.52
Ubp1-202ENSMUST00000084885 Las1lA2BE28 776 aaKnown RBP24.51■■□□□ 1.51
Ubp1-202ENSMUST00000084885 Smarca2Q6DIC0 1577 aa24.5■■□□□ 1.51
Ubp1-202ENSMUST00000084885 Mier1Q5UAK0 511 aa24.44■■□□□ 1.5
Ubp1-202ENSMUST00000084885 Crybg2B7ZCC2 1516 aa24.41■■□□□ 1.5
Ubp1-202ENSMUST00000084885 CftrP26361 1476 aa24.4■■□□□ 1.5
Ubp1-202ENSMUST00000084885 Ifnlr1Q8CGK5 535 aa24.37■■□□□ 1.49
Ubp1-202ENSMUST00000084885 Fkbp15Q6P9Q6 1216 aaKnown RBP24.35■■□□□ 1.49
Ubp1-202ENSMUST00000084885 Synj1Q8CHC4 1574 aa24.34■■□□□ 1.49
Ubp1-202ENSMUST00000084885 Pds5bQ4VA53 1446 aaKnown RBP24.33■■□□□ 1.49
Ubp1-202ENSMUST00000084885 Ercc6F8VPZ5 1481 aa24.29■■□□□ 1.48
Ubp1-202ENSMUST00000084885 Clip1Q922J3 1391 aa24.23■■□□□ 1.47
Ubp1-202ENSMUST00000084885 BicraF8VPZ9 1578 aa24.23■■□□□ 1.47
Ubp1-202ENSMUST00000084885 Zbtb7cQ8VCZ7 619 aa24.21■■□□□ 1.47
Ubp1-202ENSMUST00000084885 Supt5hO55201 1082 aaKnown RBP24.2■■□□□ 1.47
Ubp1-202ENSMUST00000084885 Eid3Q3V124 375 aa24.18■■□□□ 1.46
Ubp1-202ENSMUST00000084885 NefmP08553 848 aa24.16■■□□□ 1.46
Ubp1-202ENSMUST00000084885 Neurod1Q60867 357 aa24.12■■□□□ 1.45
Ubp1-202ENSMUST00000084885 Atad2bE9Q166 1460 aaKnown RBP24.1■■□□□ 1.45
Ubp1-202ENSMUST00000084885 Smarca4Q3TKT4 1613 aaKnown RBP24.06■■□□□ 1.44
Ubp1-202ENSMUST00000084885 Dnajc5bQ9CQ94 199 aa23.94■■□□□ 1.42
Ubp1-202ENSMUST00000084885 Iqgap2Q3UQ44 1575 aa23.92■■□□□ 1.42
Ubp1-202ENSMUST00000084885 Setd5Q5XJV7 1441 aa23.89■■□□□ 1.42
Ubp1-202ENSMUST00000084885 Cux2P70298 1426 aa23.88■■□□□ 1.41
Ubp1-202ENSMUST00000084885 Pelp1Q9DBD5 1123 aaKnown RBP23.88■■□□□ 1.41
Ubp1-202ENSMUST00000084885 Ccdc18Q640L5 1455 aa23.87■■□□□ 1.41
Ubp1-202ENSMUST00000084885 Chic2Q9D9G3 165 aa23.85■■□□□ 1.41
Ubp1-202ENSMUST00000084885 Fmn1Q05860 1466 aa23.82■■□□□ 1.4
Ubp1-202ENSMUST00000084885 BlmO88700 1416 aa23.82■■□□□ 1.4
Ubp1-202ENSMUST00000084885 Slc24a1Q91WD8 1130 aa23.81■■□□□ 1.4
Ubp1-202ENSMUST00000084885 Mapk8ip2Q9ERE9 830 aa23.8■■□□□ 1.4
Ubp1-202ENSMUST00000084885 NclP09405 707 aaKnown RBP23.78■■□□□ 1.4
Ubp1-202ENSMUST00000084885 Phldb1Q6PDH0 1371 aaKnown RBP23.78■■□□□ 1.4
Ubp1-202ENSMUST00000084885 Cttnbp2B9EJA2 1648 aa23.76■■□□□ 1.39
Ubp1-202ENSMUST00000084885 TonslQ6NZL6 1363 aa23.72■■□□□ 1.39
Ubp1-202ENSMUST00000084885 Arhgap27A2AB59 869 aa23.71■■□□□ 1.39
Ubp1-202ENSMUST00000084885 Hnrnpul2Q00PI9 745 aaKnown RBP23.71■■□□□ 1.39
Ubp1-202ENSMUST00000084885 Cep162Q6ZQ06 1403 aa23.7■■□□□ 1.38
Ubp1-202ENSMUST00000084885 Rapgef2Q8CHG7 1496 aa23.69■■□□□ 1.38
Ubp1-202ENSMUST00000084885 Gm38655A0A286YDK6 273 aa23.66■■□□□ 1.38
Ubp1-202ENSMUST00000084885 Zbtb4Q5F293 982 aa23.64■■□□□ 1.37
Ubp1-202ENSMUST00000084885 Plppr3Q7TPB0 716 aa23.63■■□□□ 1.37
Ubp1-202ENSMUST00000084885 Frmpd1A2AKB4 1549 aa23.58■■□□□ 1.37
Ubp1-202ENSMUST00000084885 Eea1Q8BL66 1411 aa23.54■■□□□ 1.36
Ubp1-202ENSMUST00000084885 Cc2d2aQ8CFW7 1633 aa23.53■■□□□ 1.36
Ubp1-202ENSMUST00000084885 Baz1bQ9Z277 1479 aa23.48■■□□□ 1.35
Ubp1-202ENSMUST00000084885 LrpprcQ6PB66 1392 aaKnown RBP23.46■■□□□ 1.35
Ubp1-202ENSMUST00000084885 Dhx29Q6PGC1 1365 aaKnown RBP23.43■■□□□ 1.34
Ubp1-202ENSMUST00000084885 Sall2Q9QX96 1004 aa23.41■■□□□ 1.34
Ubp1-202ENSMUST00000084885 Erich6D3Z6S9 713 aa23.38■■□□□ 1.33
Ubp1-202ENSMUST00000084885 Aebp1Q640N1 1128 aa23.36■■□□□ 1.33
Ubp1-202ENSMUST00000084885 Os9Q8K2C7 672 aa23.36■■□□□ 1.33
Ubp1-202ENSMUST00000084885 Csrnp3P59055 597 aa23.32■■□□□ 1.32
Ubp1-202ENSMUST00000084885 PtprkP35822 1457 aa23.31■■□□□ 1.32
Retrieved 100 of 22,080 RNA–protein pairs in 13.2 ms