RNA–Protein interactions for RNA: ENSMUST00000078830.10

Rtn4-202, Transcript of Reticulon-4, mousemouse

TSL 1 (best) BASIC

Gene Rtn4, Length 3,615 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4-202ENSMUST00000078830 Map7O88735 730 aa15.19■□□□□ 0.02
Rtn4-202ENSMUST00000078830 Q3TQI7 289 aaKnown RBP15.19■□□□□ 0.02
Rtn4-202ENSMUST00000078830 CltcQ68FD5 1675 aaKnown RBP15.19■□□□□ 0.02
Rtn4-202ENSMUST00000078830 Med14A2ABV5 1459 aaKnown RBP15.19■□□□□ 0.02
Rtn4-202ENSMUST00000078830 Adgrl1Q80TR1 1466 aa15.19■□□□□ 0.02
Rtn4-202ENSMUST00000078830 Aldh1l1Q8R0Y6 902 aa15.18■□□□□ 0.02
Rtn4-202ENSMUST00000078830 Tmem94Q7TSH8 1360 aa15.18■□□□□ 0.02
Rtn4-202ENSMUST00000078830 Trpm1Q2TV84 1622 aa15.18■□□□□ 0.02
Rtn4-202ENSMUST00000078830 SkilQ60665 675 aa15.18■□□□□ 0.02
Rtn4-202ENSMUST00000078830 Ccdc9Q8VC31 543 aaKnown RBP15.18■□□□□ 0.02
Rtn4-202ENSMUST00000078830 Atl3Q91YH5 541 aa15.18■□□□□ 0.02
Rtn4-202ENSMUST00000078830 Iqsec2Q5DU25 1478 aa15.18■□□□□ 0.02
Rtn4-202ENSMUST00000078830 Nrxn1Q9CS84 1514 aa15.17■□□□□ 0.02
Rtn4-202ENSMUST00000078830 Fam135bQ9DAI6 1403 aa15.17■□□□□ 0.02
Rtn4-202ENSMUST00000078830 Stk11ipQ3TAA7 1072 aa15.17■□□□□ 0.02
Rtn4-202ENSMUST00000078830 Hecw2Q6I6G8 1578 aa15.16■□□□□ 0.02
Rtn4-202ENSMUST00000078830 Nsd3Q6P2L6 1439 aa15.15■□□□□ 0.02
Rtn4-202ENSMUST00000078830 Eif2ak4Q9QZ05 1648 aa15.15■□□□□ 0.02
Rtn4-202ENSMUST00000078830 MvpQ9EQK5 861 aa15.15■□□□□ 0.02
Rtn4-202ENSMUST00000078830 Taok2Q6ZQ29 1240 aa15.15■□□□□ 0.02
Rtn4-202ENSMUST00000078830 Rfx1P48377 963 aa15.14■□□□□ 0.01
Rtn4-202ENSMUST00000078830 Mre11Q61216 706 aa15.14■□□□□ 0.01
Rtn4-202ENSMUST00000078830 Slc35g1Q8BY79 368 aa15.14■□□□□ 0.01
Rtn4-202ENSMUST00000078830 Smarca5Q91ZW3 1051 aaKnown RBP15.14■□□□□ 0.01
Rtn4-202ENSMUST00000078830 KnstrnQ9D9Z1 312 aaKnown RBP15.14■□□□□ 0.01
Rtn4-202ENSMUST00000078830 PaskQ8CEE6 1383 aa15.14■□□□□ 0.01
Rtn4-202ENSMUST00000078830 Adamts7Q68SA9 1657 aa15.13■□□□□ 0.01
Rtn4-202ENSMUST00000078830 Nek4Q9Z1J2 792 aa15.13■□□□□ 0.01
Rtn4-202ENSMUST00000078830 Plekhg1F6S200 1446 aa15.12■□□□□ 0.01
Rtn4-202ENSMUST00000078830 Eya1P97767 591 aa15.12■□□□□ 0.01
Rtn4-202ENSMUST00000078830 Ppp1r9bQ6R891 817 aaKnown RBP15.12■□□□□ 0.01
Rtn4-202ENSMUST00000078830 Sipa1l1Q8C0T5 1782 aa15.12■□□□□ 0.01
Rtn4-202ENSMUST00000078830 Ankrd44B2RXR6 993 aa15.11■□□□□ 0.01
Rtn4-202ENSMUST00000078830 Ythdc1E9Q5K9 736 aaKnown RBP15.11■□□□□ 0.01
Rtn4-202ENSMUST00000078830 Bcl2l13P59017 434 aa15.11■□□□□ 0.01
Rtn4-202ENSMUST00000078830 Nlgn1Q99K10 843 aa15.11■□□□□ 0.01
Rtn4-202ENSMUST00000078830 Cul9Q80TT8 1865 aa15.1■□□□□ 0.01
Rtn4-202ENSMUST00000078830 Sv2bQ8BG39 683 aa15.1■□□□□ 0.01
Rtn4-202ENSMUST00000078830 Pik3r4Q8VD65 1358 aa15.1■□□□□ 0.01
Rtn4-202ENSMUST00000078830 Rabep1O35551 862 aa15.1■□□□□ 0.01
Rtn4-202ENSMUST00000078830 DekQ7TNV0 380 aaKnown RBP15.1■□□□□ 0.01
Rtn4-202ENSMUST00000078830 CarsQ9ER72 831 aaKnown RBP15.1■□□□□ 0.01
Rtn4-202ENSMUST00000078830 Tfip11Q9ERA6 838 aaKnown RBP15.1■□□□□ 0.01
Rtn4-202ENSMUST00000078830 Kif13aQ9EQW7 1749 aa15.09■□□□□ 0.01
Rtn4-202ENSMUST00000078830 Sptbn5F6UCX4 1208 aa15.09■□□□□ 0.01
Rtn4-202ENSMUST00000078830 Abca14E9Q8F8 1683 aa15.09■□□□□ 0.01
Rtn4-202ENSMUST00000078830 Fam83gQ5SWY7 812 aa15.09■□□□□ 0.01
Rtn4-202ENSMUST00000078830 Arhgef28P97433 1693 aa15.08■□□□□ 0.01
Rtn4-202ENSMUST00000078830 Fyb1O35601 819 aa15.08■□□□□ 0
Rtn4-202ENSMUST00000078830 Znf692Q3U381 531 aa15.08■□□□□ 0
Rtn4-202ENSMUST00000078830 Eif4g2Q62448 906 aaKnown RBP15.08■□□□□ 0
Rtn4-202ENSMUST00000078830 FanclQ9CR14 375 aa15.08■□□□□ 0
Rtn4-202ENSMUST00000078830 Frmpd2A0A140LI67 1392 aa15.08■□□□□ 0
Rtn4-202ENSMUST00000078830 Chmp4cQ9D7F7 232 aa15.07■□□□□ 0
Rtn4-202ENSMUST00000078830 Phlpp2Q8BXA7 1320 aa15.07■□□□□ 0
Rtn4-202ENSMUST00000078830 NktrP30415 1453 aa15.07■□□□□ 0
Rtn4-202ENSMUST00000078830 Amotl2Q8K371 772 aa15.07■□□□□ 0
Rtn4-202ENSMUST00000078830 TatQ8QZR1 454 aa15.07■□□□□ 0
Rtn4-202ENSMUST00000078830 Prkar2bP31324 416 aa15.06■□□□□ 0
Rtn4-202ENSMUST00000078830 CalcaP70160 136 aa15.06■□□□□ 0
Rtn4-202ENSMUST00000078830 Plcb2A3KGF7 1181 aa15.06■□□□□ 0
Rtn4-202ENSMUST00000078830 Chmp4bQ9D8B3 224 aaKnown RBP15.06■□□□□ 0
Rtn4-202ENSMUST00000078830 PzpQ61838 1495 aa15.06■□□□□ 0
Rtn4-202ENSMUST00000078830 Brd1E9PZ26 1189 aaKnown RBP15.06■□□□□ 0
Rtn4-202ENSMUST00000078830 Evi5lH3BKQ3 813 aa15.06■□□□□ 0
Rtn4-202ENSMUST00000078830 AampJ3QN89 436 aa15.06■□□□□ 0
Rtn4-202ENSMUST00000078830 Trim27Q62158 513 aa15.06■□□□□ 0
Rtn4-202ENSMUST00000078830 HnrnpuQ8VEK3 800 aaKnown RBP15.05■□□□□ 0
Rtn4-202ENSMUST00000078830 GphnQ8BUV3 769 aaKnown RBP15.05■□□□□ -0
Rtn4-202ENSMUST00000078830 Hoxb7P09024 217 aa15.04■□□□□ -0
Rtn4-202ENSMUST00000078830 Tbc1d32Q3URV1 1296 aa15.04■□□□□ -0
Rtn4-202ENSMUST00000078830 Rab11fip3Q8CHD8 1047 aa15.04■□□□□ -0
Rtn4-202ENSMUST00000078830 Ncbp3Q8BZR9 615 aaKnown RBP15.03■□□□□ -0
Rtn4-202ENSMUST00000078830 Htatsf1Q8BGC0 757 aa15.03■□□□□ -0
Rtn4-202ENSMUST00000078830 PtpruB1AUH1 1446 aa15.03■□□□□ -0
Rtn4-202ENSMUST00000078830 Fkbp4P30416 458 aa15.03■□□□□ -0
Rtn4-202ENSMUST00000078830 Dnttip2Q8R2M2 758 aaKnown RBP15.03■□□□□ -0
Rtn4-202ENSMUST00000078830 HypkQ9CR41 129 aa15.03■□□□□ -0
Rtn4-202ENSMUST00000078830 Wdr63B2RY71 923 aa15.02■□□□□ -0
Rtn4-202ENSMUST00000078830 GnpatP98192 678 aa15.02□□□□□ -0.01
Rtn4-202ENSMUST00000078830 Tbc1d9Q3UYK3 1264 aa15.02□□□□□ -0.01
Rtn4-202ENSMUST00000078830 FancaQ9JL70 1439 aa15.02□□□□□ -0.01
Rtn4-202ENSMUST00000078830 Prdm2A2A7B5 1709 aaKnown RBP15.01□□□□□ -0.01
Rtn4-202ENSMUST00000078830 Itsn1Q9Z0R4 1714 aa15.01□□□□□ -0.01
Rtn4-202ENSMUST00000078830 Hoxc9P09633 260 aa15.01□□□□□ -0.01
Rtn4-202ENSMUST00000078830 Chpf2Q3UU43 768 aa15.01□□□□□ -0.01
Rtn4-202ENSMUST00000078830 Catsper2A2ARP9 588 aa15.01□□□□□ -0.01
Rtn4-202ENSMUST00000078830 Fam13aQ8BGI4 693 aa15.01□□□□□ -0.01
Rtn4-202ENSMUST00000078830 Rtn4Q99P72 1162 aaKnown RBP15.01□□□□□ -0.01
Rtn4-202ENSMUST00000078830 Astn2Q80Z10 1352 aa15.01□□□□□ -0.01
Rtn4-202ENSMUST00000078830 Q9D2X8 372 aa15□□□□□ -0.01
Rtn4-202ENSMUST00000078830 Pcdh10E9PXQ7 1057 aa15□□□□□ -0.01
Rtn4-202ENSMUST00000078830 Map3k13Q1HKZ5 959 aa15□□□□□ -0.01
Rtn4-202ENSMUST00000078830 Uhrf1bp1B2KF50 1429 aa15□□□□□ -0.01
Rtn4-202ENSMUST00000078830 Ddx17Q501J6 650 aaKnown RBP15□□□□□ -0.01
Rtn4-202ENSMUST00000078830 Ift172Q6VH22 1749 aa14.99□□□□□ -0.01
Rtn4-202ENSMUST00000078830 Slc4a10Q5DTL9 1118 aa14.99□□□□□ -0.01
Rtn4-202ENSMUST00000078830 Cetn4Q8K4K1 168 aa14.99□□□□□ -0.01
Rtn4-202ENSMUST00000078830 Dnajc10Q9DC23 793 aa14.99□□□□□ -0.01
Rtn4-202ENSMUST00000078830 Sos1Q62245 1319 aa14.99□□□□□ -0.01
Retrieved 100 of 22,080 RNA–protein pairs in 25.7 ms