RNA–Protein interactions for RNA: ENSMUST00000071057.13

Ddx55-201, Transcript of ATP-dependent RNA helicase DDX55, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ddx55, Length 2,799 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55-201ENSMUST00000071057 Brwd3A2AHJ4 1799 aa14.41□□□□□ -0.1
Ddx55-201ENSMUST00000071057 Usp32F8VPZ3 1604 aa14.41□□□□□ -0.1
Ddx55-201ENSMUST00000071057 Q3UJC8 639 aa14.41□□□□□ -0.1
Ddx55-201ENSMUST00000071057 Slit3Q9WVB4 1523 aa14.41□□□□□ -0.1
Ddx55-201ENSMUST00000071057 Uhrf1bp1lA2RSJ4 1457 aa14.41□□□□□ -0.1
Ddx55-201ENSMUST00000071057 PtpruB1AUH1 1446 aa14.4□□□□□ -0.1
Ddx55-201ENSMUST00000071057 Sh3bp5Q9Z131 463 aa14.39□□□□□ -0.11
Ddx55-201ENSMUST00000071057 Cps1Q8C196 1500 aa14.39□□□□□ -0.11
Ddx55-201ENSMUST00000071057 Mcm10Q0VBD2 885 aa14.39□□□□□ -0.11
Ddx55-201ENSMUST00000071057 Q4VA45 678 aa14.39□□□□□ -0.11
Ddx55-201ENSMUST00000071057 Chd4Q6PDQ2 1915 aaKnown RBP14.39□□□□□ -0.11
Ddx55-201ENSMUST00000071057 Ppp1r15aP17564 657 aa14.39□□□□□ -0.11
Ddx55-201ENSMUST00000071057 Rbm25B2RY56 838 aaKnown RBP14.38□□□□□ -0.11
Ddx55-201ENSMUST00000071057 Hs1bp3Q3TC93 395 aa14.38□□□□□ -0.11
Ddx55-201ENSMUST00000071057 EspnQ9ET47 871 aa14.38□□□□□ -0.11
Ddx55-201ENSMUST00000071057 Ppp1r3fQ9JIG4 799 aa14.38□□□□□ -0.11
Ddx55-201ENSMUST00000071057 Pik3r4Q8VD65 1358 aa14.38□□□□□ -0.11
Ddx55-201ENSMUST00000071057 Smc5Q8CG46 1101 aaKnown RBP14.38□□□□□ -0.11
Ddx55-201ENSMUST00000071057 AU015836B2RUM3 263 aa14.37□□□□□ -0.11
Ddx55-201ENSMUST00000071057 Tnrc6bQ8BKI2 1810 aaKnown RBP14.37□□□□□ -0.11
Ddx55-201ENSMUST00000071057 Swt1Q9DBQ9 907 aa14.37□□□□□ -0.11
Ddx55-201ENSMUST00000071057 Duxf3A0A0N4SV92 674 aa14.36□□□□□ -0.11
Ddx55-201ENSMUST00000071057 Ccdc60Q8C4J0 545 aa14.36□□□□□ -0.11
Ddx55-201ENSMUST00000071057 Ankrd50F7BE84 1390 aa14.36□□□□□ -0.11
Ddx55-201ENSMUST00000071057 CastP51125 788 aa14.36□□□□□ -0.11
Ddx55-201ENSMUST00000071057 E2f4Q8R0K9 410 aa14.36□□□□□ -0.11
Ddx55-201ENSMUST00000071057 Znf330Q922H9 316 aa14.36□□□□□ -0.11
Ddx55-201ENSMUST00000071057 Fchsd2Q3USJ8 740 aa14.35□□□□□ -0.11
Ddx55-201ENSMUST00000071057 Ciz1Q8VEH2 845 aa14.35□□□□□ -0.11
Ddx55-201ENSMUST00000071057 Znf521Q6KAS7 1311 aa14.35□□□□□ -0.11
Ddx55-201ENSMUST00000071057 Gm6268A2A3U9 297 aa14.35□□□□□ -0.11
Ddx55-201ENSMUST00000071057 Rsph6aQ8CDR2 708 aa14.35□□□□□ -0.11
Ddx55-201ENSMUST00000071057 Rlbp1Q9Z275 317 aa14.35□□□□□ -0.11
Ddx55-201ENSMUST00000071057 Cabp2Q9JLK4 216 aa14.34□□□□□ -0.11
Ddx55-201ENSMUST00000071057 Fam135bQ9DAI6 1403 aa14.34□□□□□ -0.11
Ddx55-201ENSMUST00000071057 Kif1aP33173 1695 aa14.34□□□□□ -0.11
Ddx55-201ENSMUST00000071057 Ttc21aQ8C0S4 1314 aa14.34□□□□□ -0.11
Ddx55-201ENSMUST00000071057 PaskQ8CEE6 1383 aa14.34□□□□□ -0.11
Ddx55-201ENSMUST00000071057 4930407I10RikD3Z5T8 1512 aa14.34□□□□□ -0.11
Ddx55-201ENSMUST00000071057 DaxxO35613 739 aa14.34□□□□□ -0.11
Ddx55-201ENSMUST00000071057 Ipo9Q91YE6 1041 aa14.34□□□□□ -0.11
Ddx55-201ENSMUST00000071057 Rreb1Q3UH06 1700 aaKnown RBP14.33□□□□□ -0.12
Ddx55-201ENSMUST00000071057 Uhrf1bp1B2KF50 1429 aa14.33□□□□□ -0.12
Ddx55-201ENSMUST00000071057 Speer4f2E9Q366 295 aa14.33□□□□□ -0.12
Ddx55-201ENSMUST00000071057 MpripP97434 1024 aa14.32□□□□□ -0.12
Ddx55-201ENSMUST00000071057 Idi1P58044 227 aa14.32□□□□□ -0.12
Ddx55-201ENSMUST00000071057 Nectin2P32507 530 aa14.31□□□□□ -0.12
Ddx55-201ENSMUST00000071057 Tmco5bQ80X59 307 aa14.31□□□□□ -0.12
Ddx55-201ENSMUST00000071057 Gm10563F6WIE4 79 aa14.3□□□□□ -0.12
Ddx55-201ENSMUST00000071057 Eif4a2P10630 407 aa14.3□□□□□ -0.12
Ddx55-201ENSMUST00000071057 Tnnt2P50752 301 aa14.3□□□□□ -0.12
Ddx55-201ENSMUST00000071057 Nutm1Q8BHP2 1126 aa14.3□□□□□ -0.12
Ddx55-201ENSMUST00000071057 Cdc37l1Q9CZP7 335 aa14.3□□□□□ -0.12
Ddx55-201ENSMUST00000071057 Cluap1Q8R3P7 413 aa14.29□□□□□ -0.12
Ddx55-201ENSMUST00000071057 Znf541Q0GGX2 1363 aa14.29□□□□□ -0.12
Ddx55-201ENSMUST00000071057 NudcO35685 332 aaKnown RBP14.29□□□□□ -0.12
Ddx55-201ENSMUST00000071057 G3bp1P97855 465 aaKnown RBP14.29□□□□□ -0.12
Ddx55-201ENSMUST00000071057 Trim30dE9PWL0 497 aa14.28□□□□□ -0.12
Ddx55-201ENSMUST00000071057 U2surpQ6NV83 1029 aaKnown RBP14.28□□□□□ -0.12
Ddx55-201ENSMUST00000071057 Sirt1Q923E4 737 aa14.28□□□□□ -0.12
Ddx55-201ENSMUST00000071057 Tmem94Q7TSH8 1360 aa14.28□□□□□ -0.12
Ddx55-201ENSMUST00000071057 Hoxb7P09024 217 aa14.28□□□□□ -0.12
Ddx55-201ENSMUST00000071057 Atp7bQ64446 1462 aa14.28□□□□□ -0.12
Ddx55-201ENSMUST00000071057 Astn2Q80Z10 1352 aa14.28□□□□□ -0.12
Ddx55-201ENSMUST00000071057 N4bp2F8VQG7 1678 aaKnown RBP14.28□□□□□ -0.12
Ddx55-201ENSMUST00000071057 PtmaP26350 111 aa14.27□□□□□ -0.12
Ddx55-201ENSMUST00000071057 Maco1Q7TQE6 664 aaKnown RBP14.27□□□□□ -0.12
Ddx55-201ENSMUST00000071057 GphnQ8BUV3 769 aaKnown RBP14.27□□□□□ -0.12
Ddx55-201ENSMUST00000071057 Klhdc4Q921I2 584 aa14.27□□□□□ -0.13
Ddx55-201ENSMUST00000071057 Abcc10Q8R4P9 1501 aa14.26□□□□□ -0.13
Ddx55-201ENSMUST00000071057 Arap3Q8R5G7 1538 aa14.26□□□□□ -0.13
Ddx55-201ENSMUST00000071057 Cabp4Q8VHC5 271 aa14.26□□□□□ -0.13
Ddx55-201ENSMUST00000071057 Stk31Q99MW1 1018 aa14.26□□□□□ -0.13
Ddx55-201ENSMUST00000071057 Ap3b2Q9JME5 1082 aa14.26□□□□□ -0.13
Ddx55-201ENSMUST00000071057 Bcl9Q9D219 1425 aa14.26□□□□□ -0.13
Ddx55-201ENSMUST00000071057 Spef2Q8C9J3 1734 aa14.26□□□□□ -0.13
Ddx55-201ENSMUST00000071057 Zmym3Q9JLM4 1370 aa14.26□□□□□ -0.13
Ddx55-201ENSMUST00000071057 Ccdc171E9Q1U1 1324 aa14.26□□□□□ -0.13
Ddx55-201ENSMUST00000071057 Gm21190A0A0G2JGJ6 266 aa14.26□□□□□ -0.13
Ddx55-201ENSMUST00000071057 Dnajc14Q921R4 703 aa14.25□□□□□ -0.13
Ddx55-201ENSMUST00000071057 Nckap5lQ6GQX2 1323 aa14.25□□□□□ -0.13
Ddx55-201ENSMUST00000071057 Gnai1B2RSH2 354 aa14.25□□□□□ -0.13
Ddx55-201ENSMUST00000071057 Tex2Q6ZPJ0 1128 aaKnown RBP14.25□□□□□ -0.13
Ddx55-201ENSMUST00000071057 Usp16Q99LG0 825 aa14.25□□□□□ -0.13
Ddx55-201ENSMUST00000071057 Gnai3Q9DC51 354 aa14.25□□□□□ -0.13
Ddx55-201ENSMUST00000071057 Kif20bQ80WE4 1774 aaKnown RBP14.24□□□□□ -0.13
Ddx55-201ENSMUST00000071057 Plekhm2Q80TQ5 1018 aa14.24□□□□□ -0.13
Ddx55-201ENSMUST00000071057 Dennd6aQ8BH65 605 aa14.24□□□□□ -0.13
Ddx55-201ENSMUST00000071057 D430041D05RikF6ZGR6 1678 aa14.24□□□□□ -0.13
Ddx55-201ENSMUST00000071057 Vamp4O70480 141 aa14.24□□□□□ -0.13
Ddx55-201ENSMUST00000071057 Znf335A2A5K6 1337 aa14.24□□□□□ -0.13
Ddx55-201ENSMUST00000071057 1700019A02RikA0A087WPV9 146 aa14.23□□□□□ -0.13
Ddx55-201ENSMUST00000071057 MlecQ6ZQI3 291 aaKnown RBP14.23□□□□□ -0.13
Ddx55-201ENSMUST00000071057 Nsd3Q6P2L6 1439 aa14.22□□□□□ -0.13
Ddx55-201ENSMUST00000071057 Nlgn1Q99K10 843 aa14.22□□□□□ -0.13
Ddx55-201ENSMUST00000071057 FancaQ9JL70 1439 aa14.22□□□□□ -0.13
Ddx55-201ENSMUST00000071057 Frmpd2A0A140LI67 1392 aa14.22□□□□□ -0.13
Ddx55-201ENSMUST00000071057 Irf5P56477 497 aa14.22□□□□□ -0.13
Ddx55-201ENSMUST00000071057 Iqcf3Q9D498 203 aa14.22□□□□□ -0.13
Ddx55-201ENSMUST00000071057 Parp14Q2EMV9 1817 aa14.21□□□□□ -0.13
Retrieved 100 of 22,080 RNA–protein pairs in 11.3 ms