RNA–Protein interactions for RNA: ENSMUST00000064098.13

Ldb3-204, Transcript of LIM domain-binding protein 3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ldb3, Length 2,299 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3-204ENSMUST00000064098 Robo1O89026 1612 aa15.8■□□□□ 0.12
Ldb3-204ENSMUST00000064098 PtprvP70289 1705 aa15.79■□□□□ 0.12
Ldb3-204ENSMUST00000064098 Apaf1O88879 1249 aa15.79■□□□□ 0.12
Ldb3-204ENSMUST00000064098 Nol11Q8BJW5 723 aaKnown RBP15.79■□□□□ 0.12
Ldb3-204ENSMUST00000064098 Marf1Q8BJ34 1730 aaKnown RBP15.79■□□□□ 0.12
Ldb3-204ENSMUST00000064098 MpripP97434 1024 aa15.78■□□□□ 0.12
Ldb3-204ENSMUST00000064098 Eya1P97767 591 aa15.78■□□□□ 0.12
Ldb3-204ENSMUST00000064098 Map4k4P97820 1233 aaKnown RBP15.78■□□□□ 0.12
Ldb3-204ENSMUST00000064098 Ecm2Q5FW85 670 aa15.78■□□□□ 0.12
Ldb3-204ENSMUST00000064098 Arhgef1Q61210 920 aaKnown RBP15.78■□□□□ 0.12
Ldb3-204ENSMUST00000064098 Ddx54Q8K4L0 874 aaKnown RBP15.78■□□□□ 0.12
Ldb3-204ENSMUST00000064098 Parp14Q2EMV9 1817 aa15.77■□□□□ 0.12
Ldb3-204ENSMUST00000064098 Lrrc59Q922Q8 307 aaKnown RBP15.77■□□□□ 0.11
Ldb3-204ENSMUST00000064098 Usp19Q3UJD6 1360 aa15.76■□□□□ 0.11
Ldb3-204ENSMUST00000064098 Ptpn23Q6PB44 1692 aa15.75■□□□□ 0.11
Ldb3-204ENSMUST00000064098 Mcm10Q0VBD2 885 aa15.75■□□□□ 0.11
Ldb3-204ENSMUST00000064098 Uspl1Q3ULM6 1089 aa15.75■□□□□ 0.11
Ldb3-204ENSMUST00000064098 Fchsd2Q3USJ8 740 aa15.75■□□□□ 0.11
Ldb3-204ENSMUST00000064098 Plin1Q8CGN5 517 aa15.75■□□□□ 0.11
Ldb3-204ENSMUST00000064098 Eif5bQ05D44 1216 aaKnown RBP15.74■□□□□ 0.11
Ldb3-204ENSMUST00000064098 Q4VA45 678 aa15.74■□□□□ 0.11
Ldb3-204ENSMUST00000064098 CrbnQ8C7D2 445 aa15.74■□□□□ 0.11
Ldb3-204ENSMUST00000064098 Ofd1Q80Z25 1017 aa15.73■□□□□ 0.11
Ldb3-204ENSMUST00000064098 OptnQ8K3K8 584 aa15.73■□□□□ 0.11
Ldb3-204ENSMUST00000064098 Zfp777B9EKF4 885 aa15.73■□□□□ 0.11
Ldb3-204ENSMUST00000064098 Ggt6Q6PDE7 497 aa15.73■□□□□ 0.11
Ldb3-204ENSMUST00000064098 Slx1bQ8BX32 270 aa15.73■□□□□ 0.11
Ldb3-204ENSMUST00000064098 CrklP47941 303 aa15.72■□□□□ 0.11
Ldb3-204ENSMUST00000064098 Rtl5Q5DTT4 599 aa15.72■□□□□ 0.11
Ldb3-204ENSMUST00000064098 Nyap1Q6PFX7 833 aa15.71■□□□□ 0.11
Ldb3-204ENSMUST00000064098 RgmbQ7TQ33 436 aa15.71■□□□□ 0.11
Ldb3-204ENSMUST00000064098 TnikP83510 1323 aa15.71■□□□□ 0.11
Ldb3-204ENSMUST00000064098 Mapk8ip3Q9ESN9 1337 aa15.71■□□□□ 0.11
Ldb3-204ENSMUST00000064098 Col15a1O35206 1367 aa15.7■□□□□ 0.1
Ldb3-204ENSMUST00000064098 Spef2Q8C9J3 1734 aa15.7■□□□□ 0.1
Ldb3-204ENSMUST00000064098 Rad21Q61550 635 aaKnown RBP15.7■□□□□ 0.1
Ldb3-204ENSMUST00000064098 TkfcQ8VC30 578 aa15.7■□□□□ 0.1
Ldb3-204ENSMUST00000064098 Bcl11aQ9QYE3 773 aa15.7■□□□□ 0.1
Ldb3-204ENSMUST00000064098 Pard3Q99NH2 1333 aa15.69■□□□□ 0.1
Ldb3-204ENSMUST00000064098 Fbxo41Q6NS60 873 aa15.69■□□□□ 0.1
Ldb3-204ENSMUST00000064098 Slit2Q9R1B9 1521 aa15.69■□□□□ 0.1
Ldb3-204ENSMUST00000064098 Stk31Q99MW1 1018 aa15.69■□□□□ 0.1
Ldb3-204ENSMUST00000064098 Zfp444Q3TDV8 331 aaKnown RBP15.68■□□□□ 0.1
Ldb3-204ENSMUST00000064098 Kdm6aO70546 1401 aa15.68■□□□□ 0.1
Ldb3-204ENSMUST00000064098 Sema6bO54951 886 aa15.68■□□□□ 0.1
Ldb3-204ENSMUST00000064098 Speer4f1Q9D5Q6 258 aa15.68■□□□□ 0.1
Ldb3-204ENSMUST00000064098 Cabp2Q9JLK4 216 aa15.68■□□□□ 0.1
Ldb3-204ENSMUST00000064098 Cavin4A2AMM0 362 aa15.67■□□□□ 0.1
Ldb3-204ENSMUST00000064098 Dusp27Q148W8 1138 aa15.67■□□□□ 0.1
Ldb3-204ENSMUST00000064098 Ppp1r37Q8BKR5 712 aa15.67■□□□□ 0.1
Ldb3-204ENSMUST00000064098 SafbD3YXK2 937 aaKnown RBP15.66■□□□□ 0.1
Ldb3-204ENSMUST00000064098 Gm10471E9Q1C7 252 aa15.66■□□□□ 0.1
Ldb3-204ENSMUST00000064098 Znf541Q0GGX2 1363 aa15.66■□□□□ 0.1
Ldb3-204ENSMUST00000064098 Neurod2Q62414 383 aa15.65■□□□□ 0.1
Ldb3-204ENSMUST00000064098 Zranb3Q6NZP1 1069 aa15.65■□□□□ 0.1
Ldb3-204ENSMUST00000064098 Iqcf3Q9D498 203 aa15.65■□□□□ 0.1
Ldb3-204ENSMUST00000064098 Larp1bA0A0A6YXJ7 370 aaKnown RBP15.65■□□□□ 0.1
Ldb3-204ENSMUST00000064098 MypopQ8R4U1 393 aa15.65■□□□□ 0.1
Ldb3-204ENSMUST00000064098 Slit1Q80TR4 1531 aa15.65■□□□□ 0.1
Ldb3-204ENSMUST00000064098 TmpoQ61033 693 aaKnown RBP15.64■□□□□ 0.09
Ldb3-204ENSMUST00000064098 Pak3Q61036 559 aa15.64■□□□□ 0.09
Ldb3-204ENSMUST00000064098 HypkQ9CR41 129 aa15.64■□□□□ 0.09
Ldb3-204ENSMUST00000064098 Cntnap1O54991 1385 aa15.64■□□□□ 0.09
Ldb3-204ENSMUST00000064098 Gm38655A0A286YDK6 273 aa15.64■□□□□ 0.09
Ldb3-204ENSMUST00000064098 Gsdma3Q5Y4Y6 464 aa15.64■□□□□ 0.09
Ldb3-204ENSMUST00000064098 Ciz1Q8VEH2 845 aa15.63■□□□□ 0.09
Ldb3-204ENSMUST00000064098 Simc1E9Q6E9 1354 aa15.63■□□□□ 0.09
Ldb3-204ENSMUST00000064098 Plekhd1B2RPU2 505 aa15.63■□□□□ 0.09
Ldb3-204ENSMUST00000064098 Aplp2Q06335 707 aa15.63■□□□□ 0.09
Ldb3-204ENSMUST00000064098 Ncbp3Q8BZR9 615 aaKnown RBP15.63■□□□□ 0.09
Ldb3-204ENSMUST00000064098 Atxn3Q9CVD2 355 aa15.63■□□□□ 0.09
Ldb3-204ENSMUST00000064098 Psrc1Q9D0P7 329 aa15.63■□□□□ 0.09
Ldb3-204ENSMUST00000064098 Swt1Q9DBQ9 907 aa15.63■□□□□ 0.09
Ldb3-204ENSMUST00000064098 Ralbp1Q62172 648 aa15.62■□□□□ 0.09
Ldb3-204ENSMUST00000064098 L3mbtl2P59178 703 aa15.61■□□□□ 0.09
Ldb3-204ENSMUST00000064098 Rab11fip3Q8CHD8 1047 aa15.61■□□□□ 0.09
Ldb3-204ENSMUST00000064098 Calr4Q3TQS0 420 aa15.61■□□□□ 0.09
Ldb3-204ENSMUST00000064098 Zpr1Q62384 459 aa15.61■□□□□ 0.09
Ldb3-204ENSMUST00000064098 Emilin2Q8K482 1074 aa15.61■□□□□ 0.09
Ldb3-204ENSMUST00000064098 Zeb2Q9R0G7 1215 aa15.61■□□□□ 0.09
Ldb3-204ENSMUST00000064098 Cypt2Q6P924 180 aa15.6■□□□□ 0.09
Ldb3-204ENSMUST00000064098 ThemisQ8BGW0 636 aa15.6■□□□□ 0.09
Ldb3-204ENSMUST00000064098 Eno4Q8C042 619 aa15.6■□□□□ 0.09
Ldb3-204ENSMUST00000064098 FocadA2AKG8 1798 aa15.6■□□□□ 0.09
Ldb3-204ENSMUST00000064098 Uhrf1bp1B2KF50 1429 aa15.6■□□□□ 0.09
Ldb3-204ENSMUST00000064098 Amotl1Q9D4H4 968 aa15.59■□□□□ 0.09
Ldb3-204ENSMUST00000064098 Nhsl1Q8CAF4 1587 aa15.59■□□□□ 0.09
Ldb3-204ENSMUST00000064098 Ccdc30Q8BVF4 654 aa15.59■□□□□ 0.09
Ldb3-204ENSMUST00000064098 Fam50bQ9WTJ8 334 aa15.59■□□□□ 0.09
Ldb3-204ENSMUST00000064098 Lrp6O88572 1613 aa15.58■□□□□ 0.09
Ldb3-204ENSMUST00000064098 Ccdc129Q14B48 1034 aa15.58■□□□□ 0.08
Ldb3-204ENSMUST00000064098 Cc2d1aQ8K1A6 943 aa15.58■□□□□ 0.08
Ldb3-204ENSMUST00000064098 Snap23O09044 210 aa15.57■□□□□ 0.08
Ldb3-204ENSMUST00000064098 Fnbp4Q6ZQ03 1031 aa15.56■□□□□ 0.08
Ldb3-204ENSMUST00000064098 Erbb3Q61526 1339 aa15.55■□□□□ 0.08
Ldb3-204ENSMUST00000064098 Ahnak2E9PYB0 1738 aaKnown RBP15.55■□□□□ 0.08
Ldb3-204ENSMUST00000064098 InhbeO08717 350 aa15.55■□□□□ 0.08
Ldb3-204ENSMUST00000064098 Rtf1A2AQ19 715 aaKnown RBP15.54■□□□□ 0.08
Ldb3-204ENSMUST00000064098 Sf3b2Q3UJB0 878 aaKnown RBP15.54■□□□□ 0.08
Ldb3-204ENSMUST00000064098 Arfgef2A2A5R2 1792 aa15.54■□□□□ 0.08
Retrieved 100 of 22,080 RNA–protein pairs in 12 ms