RNA–Protein interactions for RNA: ENSMUST00000064098.13

Ldb3-204, Transcript of LIM domain-binding protein 3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ldb3, Length 2,299 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3-204ENSMUST00000064098 Gm35339A0A140LHH9 1649 aa25.64■■□□□ 1.69
Ldb3-204ENSMUST00000064098 NischQ80TM9 1593 aa25.61■■□□□ 1.69
Ldb3-204ENSMUST00000064098 Abcc9P70170 1546 aa24.8■■□□□ 1.56
Ldb3-204ENSMUST00000064098 Abcc8B2RUS7 1588 aa24.62■■□□□ 1.53
Ldb3-204ENSMUST00000064098 ScribQ80U72 1612 aa23.44■■□□□ 1.34
Ldb3-204ENSMUST00000064098 Kdm5dQ62240 1548 aa22.79■■□□□ 1.24
Ldb3-204ENSMUST00000064098 NacadQ5SWP3 1504 aa22.76■■□□□ 1.23
Ldb3-204ENSMUST00000064098 Dcaf1Q80TR8 1506 aa22.76■■□□□ 1.23
Ldb3-204ENSMUST00000064098 Rhox8Q6VSS7 320 aa22.7■■□□□ 1.22
Ldb3-204ENSMUST00000064098 Rb1cc1Q9ESK9 1588 aa22.34■■□□□ 1.17
Ldb3-204ENSMUST00000064098 Sycp2Q9CUU3 1500 aa22.3■■□□□ 1.16
Ldb3-204ENSMUST00000064098 Baz1aO88379 1555 aa22.05■■□□□ 1.12
Ldb3-204ENSMUST00000064098 Ccdc180J3QNE4 1664 aa22.03■■□□□ 1.12
Ldb3-204ENSMUST00000064098 BicraF8VPZ9 1578 aa21.93■■□□□ 1.1
Ldb3-204ENSMUST00000064098 Crybg2B7ZCC2 1516 aa21.91■■□□□ 1.1
Ldb3-204ENSMUST00000064098 Zcchc6Q5BLK4 1491 aaKnown RBP21.7■■□□□ 1.06
Ldb3-204ENSMUST00000064098 Smarca2Q6DIC0 1577 aa21.46■■□□□ 1.03
Ldb3-204ENSMUST00000064098 Rtl1Q7M732 1744 aa21.45■■□□□ 1.02
Ldb3-204ENSMUST00000064098 Cecr2E9Q2Z1 1453 aa21.27■■□□□ 1
Ldb3-204ENSMUST00000064098 Ccdc136Q3TVA9 1136 aa21.21■□□□□ 0.99
Ldb3-204ENSMUST00000064098 Pds5bQ4VA53 1446 aaKnown RBP21.2■□□□□ 0.98
Ldb3-204ENSMUST00000064098 Atad2bE9Q166 1460 aaKnown RBP21.11■□□□□ 0.97
Ldb3-204ENSMUST00000064098 Smarca4Q3TKT4 1613 aaKnown RBP21.09■□□□□ 0.97
Ldb3-204ENSMUST00000064098 Iqgap2Q3UQ44 1575 aa20.92■□□□□ 0.94
Ldb3-204ENSMUST00000064098 Brd4Q9ESU6 1400 aaKnown RBP20.92■□□□□ 0.94
Ldb3-204ENSMUST00000064098 CftrP26361 1476 aa20.85■□□□□ 0.93
Ldb3-204ENSMUST00000064098 Trim41Q5NCC3 630 aa20.85■□□□□ 0.93
Ldb3-204ENSMUST00000064098 Synj1Q8CHC4 1574 aa20.83■□□□□ 0.93
Ldb3-204ENSMUST00000064098 Thoc2B1AZI6 1594 aaKnown RBP20.8■□□□□ 0.92
Ldb3-204ENSMUST00000064098 Dnajc5bQ9CQ94 199 aa20.74■□□□□ 0.91
Ldb3-204ENSMUST00000064098 Cttnbp2B9EJA2 1648 aa20.74■□□□□ 0.91
Ldb3-204ENSMUST00000064098 Ercc6F8VPZ5 1481 aa20.73■□□□□ 0.91
Ldb3-204ENSMUST00000064098 Frmpd1A2AKB4 1549 aa20.68■□□□□ 0.9
Ldb3-204ENSMUST00000064098 Wdr62Q3U3T8 1523 aa20.67■□□□□ 0.9
Ldb3-204ENSMUST00000064098 Esf1Q3V1V3 845 aaKnown RBP20.58■□□□□ 0.88
Ldb3-204ENSMUST00000064098 Cc2d2aQ8CFW7 1633 aa20.53■□□□□ 0.88
Ldb3-204ENSMUST00000064098 Phldb1Q6PDH0 1371 aaKnown RBP20.46■□□□□ 0.87
Ldb3-204ENSMUST00000064098 Fam135aQ6NS59 1506 aa20.43■□□□□ 0.86
Ldb3-204ENSMUST00000064098 Golga3P55937 1487 aa20.36■□□□□ 0.85
Ldb3-204ENSMUST00000064098 Unc13aQ4KUS2 1712 aa20.35■□□□□ 0.85
Ldb3-204ENSMUST00000064098 Cngb1E1AZ71 1325 aa20.34■□□□□ 0.85
Ldb3-204ENSMUST00000064098 Ubl4bQ9CQ84 188 aa20.31■□□□□ 0.84
Ldb3-204ENSMUST00000064098 Top2bQ64511 1612 aa20.24■□□□□ 0.83
Ldb3-204ENSMUST00000064098 Rsf1E9PWW9 1441 aaKnown RBP20.17■□□□□ 0.82
Ldb3-204ENSMUST00000064098 Baz1bQ9Z277 1479 aa20.15■□□□□ 0.82
Ldb3-204ENSMUST00000064098 Kif15Q6P9L6 1387 aa20.13■□□□□ 0.81
Ldb3-204ENSMUST00000064098 Lamc3Q9R0B6 1581 aa20.08■□□□□ 0.81
Ldb3-204ENSMUST00000064098 HrcG5E8J6 738 aa20.03■□□□□ 0.8
Ldb3-204ENSMUST00000064098 Fmn1Q05860 1466 aa20.01■□□□□ 0.79
Ldb3-204ENSMUST00000064098 Cux2P70298 1426 aa20■□□□□ 0.79
Ldb3-204ENSMUST00000064098 Ccdc88bQ4QRL3 1481 aa19.99■□□□□ 0.79
Ldb3-204ENSMUST00000064098 Mrc2Q64449 1479 aa19.99■□□□□ 0.79
Ldb3-204ENSMUST00000064098 TnnQ80Z71 1560 aa19.98■□□□□ 0.79
Ldb3-204ENSMUST00000064098 Chic1Q8CBW7 227 aa19.97■□□□□ 0.79
Ldb3-204ENSMUST00000064098 Npm1Q61937 292 aaKnown RBP19.86■□□□□ 0.77
Ldb3-204ENSMUST00000064098 Il27Q8K3I6 234 aa19.84■□□□□ 0.77
Ldb3-204ENSMUST00000064098 Ccdc18Q640L5 1455 aa19.81■□□□□ 0.76
Ldb3-204ENSMUST00000064098 Camsap1A2AHC3 1581 aa19.79■□□□□ 0.76
Ldb3-204ENSMUST00000064098 Cep164Q5DU05 1446 aa19.76■□□□□ 0.75
Ldb3-204ENSMUST00000064098 Top2aQ01320 1528 aaKnown RBP19.73■□□□□ 0.75
Ldb3-204ENSMUST00000064098 LrpprcQ6PB66 1392 aaKnown RBP19.68■□□□□ 0.74
Ldb3-204ENSMUST00000064098 Kif21aQ9QXL2 1672 aa19.67■□□□□ 0.74
Ldb3-204ENSMUST00000064098 Dhx29Q6PGC1 1365 aaKnown RBP19.61■□□□□ 0.73
Ldb3-204ENSMUST00000064098 Grin2bQ01097 1482 aa19.59■□□□□ 0.73
Ldb3-204ENSMUST00000064098 PogzQ8BZH4 1409 aaKnown RBP19.57■□□□□ 0.72
Ldb3-204ENSMUST00000064098 Gab3Q8BSM5 595 aa19.55■□□□□ 0.72
Ldb3-204ENSMUST00000064098 Duox2A2AQ99 1517 aa19.51■□□□□ 0.71
Ldb3-204ENSMUST00000064098 NrkQ9R0G8 1455 aa19.5■□□□□ 0.71
Ldb3-204ENSMUST00000064098 Lrriq1Q0P5X1 1673 aa19.5■□□□□ 0.71
Ldb3-204ENSMUST00000064098 PtprkP35822 1457 aa19.47■□□□□ 0.71
Ldb3-204ENSMUST00000064098 Crocc2F6XLV1 1638 aa19.46■□□□□ 0.71
Ldb3-204ENSMUST00000064098 Efcab5A0JP43 1406 aa19.46■□□□□ 0.71
Ldb3-204ENSMUST00000064098 Plb1Q3TTY0 1478 aa19.46■□□□□ 0.71
Ldb3-204ENSMUST00000064098 Urb2E9Q7L1 1524 aaKnown RBP19.43■□□□□ 0.7
Ldb3-204ENSMUST00000064098 Shroom4Q1W617 1475 aa19.42■□□□□ 0.7
Ldb3-204ENSMUST00000064098 Npm2Q80W85 207 aa19.37■□□□□ 0.69
Ldb3-204ENSMUST00000064098 Rapgef2Q8CHG7 1496 aa19.36■□□□□ 0.69
Ldb3-204ENSMUST00000064098 Samd9lQ69Z37 1561 aa19.32■□□□□ 0.68
Ldb3-204ENSMUST00000064098 Ift140E9PY46 1464 aa19.26■□□□□ 0.67
Ldb3-204ENSMUST00000064098 Disp1Q3TDN0 1521 aa19.25■□□□□ 0.67
Ldb3-204ENSMUST00000064098 Rad54l2Q99NG0 1466 aa19.24■□□□□ 0.67
Ldb3-204ENSMUST00000064098 Cep162Q6ZQ06 1403 aa19.24■□□□□ 0.67
Ldb3-204ENSMUST00000064098 Zeb1Q64318 1117 aa19.24■□□□□ 0.67
Ldb3-204ENSMUST00000064098 Mroh2bQ7M6Y6 1581 aa19.2■□□□□ 0.66
Ldb3-204ENSMUST00000064098 Arhgap35Q91YM2 1499 aa19.2■□□□□ 0.66
Ldb3-204ENSMUST00000064098 Eif4g3Q80XI3 1579 aaKnown RBP19.2■□□□□ 0.66
Ldb3-204ENSMUST00000064098 Eif4g1Q6NZJ6 1600 aaKnown RBP19.16■□□□□ 0.66
Ldb3-204ENSMUST00000064098 SynmQ70IV5 1561 aa19.15■□□□□ 0.66
Ldb3-204ENSMUST00000064098 Magi3Q9EQJ9 1476 aa19.14■□□□□ 0.65
Ldb3-204ENSMUST00000064098 Myt1lP97500 1187 aa19.13■□□□□ 0.65
Ldb3-204ENSMUST00000064098 Nup160Q9Z0W3 1402 aaKnown RBP19.13■□□□□ 0.65
Ldb3-204ENSMUST00000064098 Grin2aP35436 1464 aa19.12■□□□□ 0.65
Ldb3-204ENSMUST00000064098 Map3k1P53349 1493 aa19.11■□□□□ 0.65
Ldb3-204ENSMUST00000064098 Setd1bQ8CFT2 1985 aa19.1■□□□□ 0.65
Ldb3-204ENSMUST00000064098 Pla2r1Q62028 1487 aa19.07■□□□□ 0.64
Ldb3-204ENSMUST00000064098 Rusc2Q80U22 1514 aa19.07■□□□□ 0.64
Ldb3-204ENSMUST00000064098 Cc2d2bA0A286YDU8 1405 aa19.07■□□□□ 0.64
Ldb3-204ENSMUST00000064098 Pbrm1Q8BSQ9 1634 aaKnown RBP19.06■□□□□ 0.64
Ldb3-204ENSMUST00000064098 Carmil1Q6EDY6 1374 aa19.04■□□□□ 0.64
Ldb3-204ENSMUST00000064098 Clip1Q922J3 1391 aa19.04■□□□□ 0.64
Retrieved 100 of 22,080 RNA–protein pairs in 22.6 ms