RNA–Protein interactions for RNA: ENSMUST00000048274.10

Ttc39b-202, Transcript of Tetratricopeptide repeat protein 39B, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ttc39b, Length 1,804 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc39b-202ENSMUST00000048274 Vamp4O70480 141 aa20.21■□□□□ 0.83
Ttc39b-202ENSMUST00000048274 Zranb1Q7M760 708 aa20.21■□□□□ 0.83
Ttc39b-202ENSMUST00000048274 Pdcl3Q8BVF2 240 aa20.21■□□□□ 0.83
Ttc39b-202ENSMUST00000048274 Atp2b2Q9R0K7 1198 aa20.21■□□□□ 0.83
Ttc39b-202ENSMUST00000048274 PalmQ9Z0P4 383 aa20.21■□□□□ 0.83
Ttc39b-202ENSMUST00000048274 Mcm4P49717 862 aa20.2■□□□□ 0.82
Ttc39b-202ENSMUST00000048274 Cog6Q8R3I3 657 aa20.2■□□□□ 0.82
Ttc39b-202ENSMUST00000048274 Gnai1B2RSH2 354 aa20.19■□□□□ 0.82
Ttc39b-202ENSMUST00000048274 Cdc37l1Q9CZP7 335 aa20.19■□□□□ 0.82
Ttc39b-202ENSMUST00000048274 Gnai3Q9DC51 354 aa20.19■□□□□ 0.82
Ttc39b-202ENSMUST00000048274 Sos1Q62245 1319 aa20.19■□□□□ 0.82
Ttc39b-202ENSMUST00000048274 Kdm4cQ8VCD7 1054 aa20.18■□□□□ 0.82
Ttc39b-202ENSMUST00000048274 Ercc6l2Q9JIM3 1537 aa20.18■□□□□ 0.82
Ttc39b-202ENSMUST00000048274 Mdc1Q5PSV9 1707 aa20.18■□□□□ 0.82
Ttc39b-202ENSMUST00000048274 Wdr63B2RY71 923 aa20.18■□□□□ 0.82
Ttc39b-202ENSMUST00000048274 Map3k19E9Q3S4 1311 aa20.17■□□□□ 0.82
Ttc39b-202ENSMUST00000048274 Utp14aQ640M1 767 aaKnown RBP20.16■□□□□ 0.82
Ttc39b-202ENSMUST00000048274 Cgnl1Q6AW69 1298 aa20.16■□□□□ 0.82
Ttc39b-202ENSMUST00000048274 Ssh1Q76I79 1042 aa20.16■□□□□ 0.82
Ttc39b-202ENSMUST00000048274 Dip2aQ8BWT5 1523 aa20.16■□□□□ 0.82
Ttc39b-202ENSMUST00000048274 Hoxb7P09024 217 aa20.16■□□□□ 0.82
Ttc39b-202ENSMUST00000048274 Kif20bQ80WE4 1774 aaKnown RBP20.15■□□□□ 0.82
Ttc39b-202ENSMUST00000048274 Ddit3P35639 168 aa20.15■□□□□ 0.82
Ttc39b-202ENSMUST00000048274 Cdk12Q14AX6 1484 aaKnown RBP20.14■□□□□ 0.81
Ttc39b-202ENSMUST00000048274 ArxO35085 564 aa20.13■□□□□ 0.81
Ttc39b-202ENSMUST00000048274 Aldh8a1Q8BH00 487 aa20.13■□□□□ 0.81
Ttc39b-202ENSMUST00000048274 Aldh1l2Q8K009 923 aa20.13■□□□□ 0.81
Ttc39b-202ENSMUST00000048274 PtpruB1AUH1 1446 aa20.13■□□□□ 0.81
Ttc39b-202ENSMUST00000048274 Rsph3aQ3UFY4 516 aa20.13■□□□□ 0.81
Ttc39b-202ENSMUST00000048274 MarsQ68FL6 902 aaKnown RBP20.13■□□□□ 0.81
Ttc39b-202ENSMUST00000048274 Znf330Q922H9 316 aa20.13■□□□□ 0.81
Ttc39b-202ENSMUST00000048274 Gtf2a1Q99PM3 378 aa20.13■□□□□ 0.81
Ttc39b-202ENSMUST00000048274 Kcnn1Q9EQR3 537 aa20.12■□□□□ 0.81
Ttc39b-202ENSMUST00000048274 Q9D9H8 365 aa20.11■□□□□ 0.81
Ttc39b-202ENSMUST00000048274 Dnttip2Q8R2M2 758 aaKnown RBP20.11■□□□□ 0.81
Ttc39b-202ENSMUST00000048274 Atp1b4Q99ME6 356 aa20.11■□□□□ 0.81
Ttc39b-202ENSMUST00000048274 Trim27Q62158 513 aa20.1■□□□□ 0.81
Ttc39b-202ENSMUST00000048274 Cps1Q8C196 1500 aa20.09■□□□□ 0.81
Ttc39b-202ENSMUST00000048274 Anapc15-psA0A140T8L6 141 aa20.09■□□□□ 0.81
Ttc39b-202ENSMUST00000048274 Uhrf1bp1lA2RSJ4 1457 aa20.09■□□□□ 0.81
Ttc39b-202ENSMUST00000048274 Idi2Q8BFZ6 227 aa20.09■□□□□ 0.81
Ttc39b-202ENSMUST00000048274 Mcm2P97310 904 aa20.08■□□□□ 0.8
Ttc39b-202ENSMUST00000048274 Tbc1d9Q3UYK3 1264 aa20.08■□□□□ 0.8
Ttc39b-202ENSMUST00000048274 HnrnpuQ8VEK3 800 aaKnown RBP20.08■□□□□ 0.8
Ttc39b-202ENSMUST00000048274 CarsQ9ER72 831 aaKnown RBP20.08■□□□□ 0.8
Ttc39b-202ENSMUST00000048274 RictorQ6QI06 1708 aa20.08■□□□□ 0.8
Ttc39b-202ENSMUST00000048274 Rsph6aQ8CDR2 708 aa20.07■□□□□ 0.8
Ttc39b-202ENSMUST00000048274 CenppQ9CZ92 286 aa20.07■□□□□ 0.8
Ttc39b-202ENSMUST00000048274 Gcc1Q9D4H2 778 aa20.07■□□□□ 0.8
Ttc39b-202ENSMUST00000048274 1700010I14RikQ7TPG0 532 aa20.06■□□□□ 0.8
Ttc39b-202ENSMUST00000048274 Nsfl1cQ9CZ44 370 aaKnown RBP20.06■□□□□ 0.8
Ttc39b-202ENSMUST00000048274 Gemin5Q8BX17 1502 aaKnown RBP20.06■□□□□ 0.8
Ttc39b-202ENSMUST00000048274 Tmco5bQ80X59 307 aa20.06■□□□□ 0.8
Ttc39b-202ENSMUST00000048274 Nutm1Q8BHP2 1126 aa20.06■□□□□ 0.8
Ttc39b-202ENSMUST00000048274 Adgrb1Q3UHD1 1582 aa20.05■□□□□ 0.8
Ttc39b-202ENSMUST00000048274 Med1Q925J9 1575 aa20.05■□□□□ 0.8
Ttc39b-202ENSMUST00000048274 Nectin2P32507 530 aa20.05■□□□□ 0.8
Ttc39b-202ENSMUST00000048274 Tet3Q8BG87 1668 aa20.03■□□□□ 0.8
Ttc39b-202ENSMUST00000048274 Tm6sf1P58749 370 aa20.02■□□□□ 0.8
Ttc39b-202ENSMUST00000048274 Eif4g2Q62448 906 aaKnown RBP20.02■□□□□ 0.8
Ttc39b-202ENSMUST00000048274 Pik3c2bE9QAN8 1632 aa20.02■□□□□ 0.8
Ttc39b-202ENSMUST00000048274 Amer1Q7TS75 1132 aa20.02■□□□□ 0.79
Ttc39b-202ENSMUST00000048274 Phf23Q8BSN5 401 aa20.01■□□□□ 0.79
Ttc39b-202ENSMUST00000048274 Rab11fip3Q8CHD8 1047 aa20.01■□□□□ 0.79
Ttc39b-202ENSMUST00000048274 Nek4Q9Z1J2 792 aa20.01■□□□□ 0.79
Ttc39b-202ENSMUST00000048274 Tnrc6bQ8BKI2 1810 aaKnown RBP20.01■□□□□ 0.79
Ttc39b-202ENSMUST00000048274 EngaseQ8BX80 734 aa20■□□□□ 0.79
Ttc39b-202ENSMUST00000048274 Rrp9Q91WM3 475 aaKnown RBP20■□□□□ 0.79
Ttc39b-202ENSMUST00000048274 Usp16Q99LG0 825 aa20■□□□□ 0.79
Ttc39b-202ENSMUST00000048274 Rnf123Q5XPI3 1314 aa20■□□□□ 0.79
Ttc39b-202ENSMUST00000048274 Kif24Q6NWW5 1356 aa20■□□□□ 0.79
Ttc39b-202ENSMUST00000048274 Tfip11Q9ERA6 838 aaKnown RBP19.99■□□□□ 0.79
Ttc39b-202ENSMUST00000048274 NalcnQ8BXR5 1738 aa19.99■□□□□ 0.79
Ttc39b-202ENSMUST00000048274 4930407I10RikD3Z5T8 1512 aa19.99■□□□□ 0.79
Ttc39b-202ENSMUST00000048274 Frmpd2A0A140LI67 1392 aa19.99■□□□□ 0.79
Ttc39b-202ENSMUST00000048274 Plcb2A3KGF7 1181 aa19.98■□□□□ 0.79
Ttc39b-202ENSMUST00000048274 Il4rP16382 810 aa19.98■□□□□ 0.79
Ttc39b-202ENSMUST00000048274 Aplp1Q03157 653 aa19.98■□□□□ 0.79
Ttc39b-202ENSMUST00000048274 Sirt1Q923E4 737 aa19.98■□□□□ 0.79
Ttc39b-202ENSMUST00000048274 Elp1Q7TT37 1333 aaKnown RBP19.98■□□□□ 0.79
Ttc39b-202ENSMUST00000048274 Slit2Q9R1B9 1521 aa19.98■□□□□ 0.79
Ttc39b-202ENSMUST00000048274 CatipB9EKE5 520 aa19.97■□□□□ 0.79
Ttc39b-202ENSMUST00000048274 Birc3O08863 600 aa19.97■□□□□ 0.79
Ttc39b-202ENSMUST00000048274 Rfx1P48377 963 aa19.97■□□□□ 0.79
Ttc39b-202ENSMUST00000048274 Fbxo41Q6NS60 873 aa19.97■□□□□ 0.79
Ttc39b-202ENSMUST00000048274 Spryd3E9Q9B3 442 aa19.97■□□□□ 0.79
Ttc39b-202ENSMUST00000048274 Chl1P70232 1209 aa19.97■□□□□ 0.79
Ttc39b-202ENSMUST00000048274 Ric3Q8BPM6 367 aa19.97■□□□□ 0.79
Ttc39b-202ENSMUST00000048274 Chd4Q6PDQ2 1915 aaKnown RBP19.97■□□□□ 0.79
Ttc39b-202ENSMUST00000048274 Casq1O09165 405 aa19.95■□□□□ 0.78
Ttc39b-202ENSMUST00000048274 Astn2Q80Z10 1352 aa19.95■□□□□ 0.78
Ttc39b-202ENSMUST00000048274 Cabp2Q9JLK4 216 aa19.95■□□□□ 0.78
Ttc39b-202ENSMUST00000048274 Ppip5k2Q6ZQB6 1129 aa19.95■□□□□ 0.78
Ttc39b-202ENSMUST00000048274 Znf335A2A5K6 1337 aa19.94■□□□□ 0.78
Ttc39b-202ENSMUST00000048274 Nucb1Q02819 459 aaKnown RBP19.94■□□□□ 0.78
Ttc39b-202ENSMUST00000048274 Afap1Q80YS6 731 aa19.94■□□□□ 0.78
Ttc39b-202ENSMUST00000048274 NpatQ8BMA5 1420 aa19.93■□□□□ 0.78
Ttc39b-202ENSMUST00000048274 Ppp6r3Q922D4 844 aa19.93■□□□□ 0.78
Ttc39b-202ENSMUST00000048274 Slit3Q9WVB4 1523 aa19.93■□□□□ 0.78
Ttc39b-202ENSMUST00000048274 Fam13aQ8BGI4 693 aa19.92■□□□□ 0.78
Retrieved 100 of 22,080 RNA–protein pairs in 29.8 ms