RNA–Protein interactions for RNA: ENSMUST00000039443.13

Ccdc50-201, Transcript of Coiled-coil domain-containing protein 50, mousemouse

TSL 1 (best) BASIC

Gene Ccdc50, Length 2,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc50-201ENSMUST00000039443 Aldh1l1Q8R0Y6 902 aa23.82■■□□□ 1.4
Ccdc50-201ENSMUST00000039443 Rrp9Q91WM3 475 aaKnown RBP23.82■■□□□ 1.4
Ccdc50-201ENSMUST00000039443 Spryd3E9Q9B3 442 aa23.81■■□□□ 1.4
Ccdc50-201ENSMUST00000039443 Rimbp3Q3V0F0 1606 aa23.81■■□□□ 1.4
Ccdc50-201ENSMUST00000039443 LifrP42703 1092 aa23.8■■□□□ 1.4
Ccdc50-201ENSMUST00000039443 MvpQ9EQK5 861 aa23.8■■□□□ 1.4
Ccdc50-201ENSMUST00000039443 Arhgef28P97433 1693 aa23.79■■□□□ 1.4
Ccdc50-201ENSMUST00000039443 Znf330Q922H9 316 aa23.79■■□□□ 1.4
Ccdc50-201ENSMUST00000039443 Psme1P97371 249 aa23.78■■□□□ 1.4
Ccdc50-201ENSMUST00000039443 Stk26Q99JT2 416 aa23.78■■□□□ 1.4
Ccdc50-201ENSMUST00000039443 Cyb5rlB1AS42 316 aa23.77■■□□□ 1.4
Ccdc50-201ENSMUST00000039443 Lmtk3Q5XJV6 1424 aa23.77■■□□□ 1.4
Ccdc50-201ENSMUST00000039443 Dip2aQ8BWT5 1523 aa23.77■■□□□ 1.4
Ccdc50-201ENSMUST00000039443 NinlQ6ZQ12 1394 aa23.77■■□□□ 1.39
Ccdc50-201ENSMUST00000039443 Plcb2A3KGF7 1181 aa23.76■■□□□ 1.39
Ccdc50-201ENSMUST00000039443 Q4VA45 678 aa23.76■■□□□ 1.39
Ccdc50-201ENSMUST00000039443 Trim28Q62318 834 aa23.76■■□□□ 1.39
Ccdc50-201ENSMUST00000039443 Kdm4cQ8VCD7 1054 aa23.76■■□□□ 1.39
Ccdc50-201ENSMUST00000039443 Q3UPC7 1272 aa23.75■■□□□ 1.39
Ccdc50-201ENSMUST00000039443 Cgnl1Q6AW69 1298 aa23.75■■□□□ 1.39
Ccdc50-201ENSMUST00000039443 Plekhm2Q80TQ5 1018 aa23.75■■□□□ 1.39
Ccdc50-201ENSMUST00000039443 Plekhg1F6S200 1446 aa23.75■■□□□ 1.39
Ccdc50-201ENSMUST00000039443 Wdr63B2RY71 923 aa23.75■■□□□ 1.39
Ccdc50-201ENSMUST00000039443 Nsd3Q6P2L6 1439 aa23.74■■□□□ 1.39
Ccdc50-201ENSMUST00000039443 Ankrd44B2RXR6 993 aa23.74■■□□□ 1.39
Ccdc50-201ENSMUST00000039443 Slc12a5Q91V14 1138 aa23.74■■□□□ 1.39
Ccdc50-201ENSMUST00000039443 Phlpp1Q8CHE4 1687 aa23.73■■□□□ 1.39
Ccdc50-201ENSMUST00000039443 Shq1Q7TMX5 569 aa23.73■■□□□ 1.39
Ccdc50-201ENSMUST00000039443 Cdc37l1Q9CZP7 335 aa23.72■■□□□ 1.39
Ccdc50-201ENSMUST00000039443 Cep170bQ80U49 1574 aa23.72■■□□□ 1.39
Ccdc50-201ENSMUST00000039443 Gnai1B2RSH2 354 aa23.72■■□□□ 1.39
Ccdc50-201ENSMUST00000039443 Gnai3Q9DC51 354 aa23.72■■□□□ 1.39
Ccdc50-201ENSMUST00000039443 PalmQ9Z0P4 383 aa23.72■■□□□ 1.39
Ccdc50-201ENSMUST00000039443 Rims2Q9EQZ7 1530 aa23.72■■□□□ 1.39
Ccdc50-201ENSMUST00000039443 Ddit3P35639 168 aa23.71■■□□□ 1.39
Ccdc50-201ENSMUST00000039443 Cavin2Q63918 418 aaKnown RBP23.71■■□□□ 1.39
Ccdc50-201ENSMUST00000039443 Atp1b4Q99ME6 356 aa23.71■■□□□ 1.39
Ccdc50-201ENSMUST00000039443 Scn4aQ9ER60 1841 aa23.7■■□□□ 1.39
Ccdc50-201ENSMUST00000039443 Vamp4O70480 141 aa23.7■■□□□ 1.38
Ccdc50-201ENSMUST00000039443 Tmco5bQ80X59 307 aa23.69■■□□□ 1.38
Ccdc50-201ENSMUST00000039443 Cdk19Q8BWD8 501 aa23.69■■□□□ 1.38
Ccdc50-201ENSMUST00000039443 Ppp1r15aP17564 657 aa23.69■■□□□ 1.38
Ccdc50-201ENSMUST00000039443 HnrnpuQ8VEK3 800 aaKnown RBP23.69■■□□□ 1.38
Ccdc50-201ENSMUST00000039443 Slit3Q9WVB4 1523 aa23.69■■□□□ 1.38
Ccdc50-201ENSMUST00000039443 NktrP30415 1453 aa23.68■■□□□ 1.38
Ccdc50-201ENSMUST00000039443 Zranb1Q7M760 708 aa23.68■■□□□ 1.38
Ccdc50-201ENSMUST00000039443 Il4rP16382 810 aa23.68■■□□□ 1.38
Ccdc50-201ENSMUST00000039443 1700010I14RikQ7TPG0 532 aa23.68■■□□□ 1.38
Ccdc50-201ENSMUST00000039443 Nutm1Q8BHP2 1126 aa23.68■■□□□ 1.38
Ccdc50-201ENSMUST00000039443 Abca14E9Q8F8 1683 aa23.68■■□□□ 1.38
Ccdc50-201ENSMUST00000039443 Sos1Q62245 1319 aa23.67■■□□□ 1.38
Ccdc50-201ENSMUST00000039443 Rfx1P48377 963 aa23.67■■□□□ 1.38
Ccdc50-201ENSMUST00000039443 Tbc1d9Q3UYK3 1264 aa23.67■■□□□ 1.38
Ccdc50-201ENSMUST00000039443 Atp2b2Q9R0K7 1198 aa23.67■■□□□ 1.38
Ccdc50-201ENSMUST00000039443 Nsfl1cQ9CZ44 370 aaKnown RBP23.67■■□□□ 1.38
Ccdc50-201ENSMUST00000039443 CarsQ9ER72 831 aaKnown RBP23.67■■□□□ 1.38
Ccdc50-201ENSMUST00000039443 IghaA0A0A6YXW6 389 aa23.65■■□□□ 1.38
Ccdc50-201ENSMUST00000039443 Anapc15-psA0A140T8L6 141 aa23.65■■□□□ 1.38
Ccdc50-201ENSMUST00000039443 Aldh8a1Q8BH00 487 aa23.65■■□□□ 1.38
Ccdc50-201ENSMUST00000039443 Q9D9H8 365 aa23.65■■□□□ 1.38
Ccdc50-201ENSMUST00000039443 Spef2Q8C9J3 1734 aa23.65■■□□□ 1.38
Ccdc50-201ENSMUST00000039443 Nectin2P32507 530 aa23.64■■□□□ 1.38
Ccdc50-201ENSMUST00000039443 Pknox2Q8BG99 474 aa23.64■■□□□ 1.38
Ccdc50-201ENSMUST00000039443 Mcm2P97310 904 aa23.64■■□□□ 1.37
Ccdc50-201ENSMUST00000039443 Utp14aQ640M1 767 aaKnown RBP23.64■■□□□ 1.37
Ccdc50-201ENSMUST00000039443 Rangap1P46061 589 aaKnown RBP23.63■■□□□ 1.37
Ccdc50-201ENSMUST00000039443 Gcc1Q9D4H2 778 aa23.62■■□□□ 1.37
Ccdc50-201ENSMUST00000039443 PzpQ61838 1495 aa23.62■■□□□ 1.37
Ccdc50-201ENSMUST00000039443 Trim27Q62158 513 aa23.62■■□□□ 1.37
Ccdc50-201ENSMUST00000039443 Rrp12Q6P5B0 1295 aaKnown RBP23.62■■□□□ 1.37
Ccdc50-201ENSMUST00000039443 CenppQ9CZ92 286 aa23.62■■□□□ 1.37
Ccdc50-201ENSMUST00000039443 Trim44Q9QXA7 346 aa23.62■■□□□ 1.37
Ccdc50-201ENSMUST00000039443 Nek4Q9Z1J2 792 aa23.62■■□□□ 1.37
Ccdc50-201ENSMUST00000039443 Asxl2Q8BZ32 1370 aa23.61■■□□□ 1.37
Ccdc50-201ENSMUST00000039443 Eif4g2Q62448 906 aaKnown RBP23.61■■□□□ 1.37
Ccdc50-201ENSMUST00000039443 Tfip11Q9ERA6 838 aaKnown RBP23.61■■□□□ 1.37
Ccdc50-201ENSMUST00000039443 Casq1O09165 405 aa23.61■■□□□ 1.37
Ccdc50-201ENSMUST00000039443 Kif1aP33173 1695 aa23.6■■□□□ 1.37
Ccdc50-201ENSMUST00000039443 Aldh1l2Q8K009 923 aa23.59■■□□□ 1.37
Ccdc50-201ENSMUST00000039443 Med1Q925J9 1575 aa23.58■■□□□ 1.36
Ccdc50-201ENSMUST00000039443 MarsQ68FL6 902 aaKnown RBP23.57■■□□□ 1.36
Ccdc50-201ENSMUST00000039443 Nrxn3Q6P9K9 1571 aa23.57■■□□□ 1.36
Ccdc50-201ENSMUST00000039443 Ddrgk1Q80WW9 315 aa23.57■■□□□ 1.36
Ccdc50-201ENSMUST00000039443 Ltbp4Q8K4G1 1666 aa23.56■■□□□ 1.36
Ccdc50-201ENSMUST00000039443 Paxip1Q6NZQ4 1056 aa23.56■■□□□ 1.36
Ccdc50-201ENSMUST00000039443 Kif20bQ80WE4 1774 aaKnown RBP23.56■■□□□ 1.36
Ccdc50-201ENSMUST00000039443 Aplp1Q03157 653 aa23.55■■□□□ 1.36
Ccdc50-201ENSMUST00000039443 DekQ7TNV0 380 aaKnown RBP23.55■■□□□ 1.36
Ccdc50-201ENSMUST00000039443 GorabQ8BRM2 368 aa23.55■■□□□ 1.36
Ccdc50-201ENSMUST00000039443 Map3k19E9Q3S4 1311 aa23.55■■□□□ 1.36
Ccdc50-201ENSMUST00000039443 Arap3Q8R5G7 1538 aa23.54■■□□□ 1.36
Ccdc50-201ENSMUST00000039443 Rab11fip3Q8CHD8 1047 aa23.54■■□□□ 1.36
Ccdc50-201ENSMUST00000039443 PtmsQ9D0J8 101 aaKnown RBP23.54■■□□□ 1.36
Ccdc50-201ENSMUST00000039443 Nwd1A6H603 1563 aa23.54■■□□□ 1.36
Ccdc50-201ENSMUST00000039443 Usp16Q99LG0 825 aa23.54■■□□□ 1.36
Ccdc50-201ENSMUST00000039443 ScaperF8VQ70 1398 aaKnown RBP23.53■■□□□ 1.36
Ccdc50-201ENSMUST00000039443 Hoxb7P09024 217 aa23.52■■□□□ 1.36
Ccdc50-201ENSMUST00000039443 SlkO54988 1233 aa23.51■■□□□ 1.35
Ccdc50-201ENSMUST00000039443 Ppip5k2Q6ZQB6 1129 aa23.51■■□□□ 1.35
Ccdc50-201ENSMUST00000039443 EngaseQ8BX80 734 aa23.51■■□□□ 1.35
Retrieved 100 of 22,080 RNA–protein pairs in 9.9 ms