RNA–Protein interactions for RNA: ENSMUST00000033088.7

Rnf40-201, Transcript of E3 ubiquitin-protein ligase BRE1B, mousemouse

TSL 5 BASIC

Gene Rnf40, Length 3,906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40-201ENSMUST00000033088 BccipQ9CWI3 316 aa12.98□□□□□ -0.33
Rnf40-201ENSMUST00000033088 AnkarA2RT91 1465 aa12.98□□□□□ -0.33
Rnf40-201ENSMUST00000033088 Samm50Q8BGH2 469 aa12.97□□□□□ -0.33
Rnf40-201ENSMUST00000033088 Abca6Q8K441 1624 aa12.97□□□□□ -0.33
Rnf40-201ENSMUST00000033088 Cdk13Q69ZA1 1511 aaKnown RBP12.97□□□□□ -0.33
Rnf40-201ENSMUST00000033088 Bach1P97302 739 aa12.97□□□□□ -0.33
Rnf40-201ENSMUST00000033088 Tshz3Q8CGV9 1081 aa12.97□□□□□ -0.33
Rnf40-201ENSMUST00000033088 Bicd2Q921C5 820 aa12.97□□□□□ -0.33
Rnf40-201ENSMUST00000033088 Zranb1Q7M760 708 aa12.96□□□□□ -0.33
Rnf40-201ENSMUST00000033088 ErbinQ80TH2 1402 aa12.96□□□□□ -0.33
Rnf40-201ENSMUST00000033088 Gadd45bP22339 160 aa12.96□□□□□ -0.33
Rnf40-201ENSMUST00000033088 Jakmip1Q8BVL9 626 aa12.96□□□□□ -0.33
Rnf40-201ENSMUST00000033088 Kif20aP97329 887 aa12.96□□□□□ -0.34
Rnf40-201ENSMUST00000033088 Fez1Q8K0X8 392 aa12.96□□□□□ -0.34
Rnf40-201ENSMUST00000033088 PnnO35691 725 aaKnown RBP12.95□□□□□ -0.34
Rnf40-201ENSMUST00000033088 Cald1E9QA15 768 aaKnown RBP12.95□□□□□ -0.34
Rnf40-201ENSMUST00000033088 Taf3Q5HZG4 932 aa12.95□□□□□ -0.34
Rnf40-201ENSMUST00000033088 Chmp4bQ9D8B3 224 aaKnown RBP12.95□□□□□ -0.34
Rnf40-201ENSMUST00000033088 Rcan3Q9JKK0 239 aa12.95□□□□□ -0.34
Rnf40-201ENSMUST00000033088 Rtf1A2AQ19 715 aaKnown RBP12.95□□□□□ -0.34
Rnf40-201ENSMUST00000033088 Hnrnpul1Q8VDM6 859 aaKnown RBP12.95□□□□□ -0.34
Rnf40-201ENSMUST00000033088 Irf5P56477 497 aa12.94□□□□□ -0.34
Rnf40-201ENSMUST00000033088 Zpr1Q62384 459 aa12.94□□□□□ -0.34
Rnf40-201ENSMUST00000033088 Znf771Q8BJ90 317 aa12.94□□□□□ -0.34
Rnf40-201ENSMUST00000033088 Bag4Q8CI61 457 aa12.94□□□□□ -0.34
Rnf40-201ENSMUST00000033088 CastP51125 788 aa12.94□□□□□ -0.34
Rnf40-201ENSMUST00000033088 Zkscan1Q8BGS3 561 aaKnown RBP12.94□□□□□ -0.34
Rnf40-201ENSMUST00000033088 Prex1Q69ZK0 1650 aa12.94□□□□□ -0.34
Rnf40-201ENSMUST00000033088 Rab3gap2Q8BMG7 1366 aa12.94□□□□□ -0.34
Rnf40-201ENSMUST00000033088 Gtf3c5Q8R2T8 520 aa12.94□□□□□ -0.34
Rnf40-201ENSMUST00000033088 Yeats2Q3TUF7 1407 aa12.93□□□□□ -0.34
Rnf40-201ENSMUST00000033088 Tmem131lQ3U3D7 1597 aa12.93□□□□□ -0.34
Rnf40-201ENSMUST00000033088 Ccer1Q9CQL2 403 aa12.93□□□□□ -0.34
Rnf40-201ENSMUST00000033088 Kcnn1Q9EQR3 537 aa12.93□□□□□ -0.34
Rnf40-201ENSMUST00000033088 Abcc6Q9R1S7 1498 aa12.93□□□□□ -0.34
Rnf40-201ENSMUST00000033088 Hecw2Q6I6G8 1578 aa12.93□□□□□ -0.34
Rnf40-201ENSMUST00000033088 AU019823E9PUQ3 292 aa12.93□□□□□ -0.34
Rnf40-201ENSMUST00000033088 Utp14aQ640M1 767 aaKnown RBP12.93□□□□□ -0.34
Rnf40-201ENSMUST00000033088 PtmsQ9D0J8 101 aaKnown RBP12.93□□□□□ -0.34
Rnf40-201ENSMUST00000033088 Bcl2l13P59017 434 aa12.92□□□□□ -0.34
Rnf40-201ENSMUST00000033088 EappQ5BU09 281 aa12.92□□□□□ -0.34
Rnf40-201ENSMUST00000033088 Bloc1s4Q8VED2 215 aa12.92□□□□□ -0.34
Rnf40-201ENSMUST00000033088 Rsph4aQ8BYM7 716 aa12.92□□□□□ -0.34
Rnf40-201ENSMUST00000033088 Gys2Q8VCB3 704 aa12.92□□□□□ -0.34
Rnf40-201ENSMUST00000033088 Smc3Q9CW03 1217 aaKnown RBP12.92□□□□□ -0.34
Rnf40-201ENSMUST00000033088 AdgbG3UZ78 1657 aa12.92□□□□□ -0.34
Rnf40-201ENSMUST00000033088 Bcl11bQ99PV8 884 aa12.91□□□□□ -0.34
Rnf40-201ENSMUST00000033088 Chd1lQ9CXF7 900 aa12.91□□□□□ -0.34
Rnf40-201ENSMUST00000033088 Iqgap3F8VQ29 1632 aa12.91□□□□□ -0.34
Rnf40-201ENSMUST00000033088 SrrtQ99MR6 875 aaKnown RBP12.91□□□□□ -0.34
Rnf40-201ENSMUST00000033088 Adamts13Q769J6 1426 aa12.91□□□□□ -0.34
Rnf40-201ENSMUST00000033088 Cul9Q80TT8 1865 aa12.91□□□□□ -0.34
Rnf40-201ENSMUST00000033088 4931400O07RikQ9D4M5 137 aa12.91□□□□□ -0.34
Rnf40-201ENSMUST00000033088 Tulp4Q9JIL5 1547 aa12.9□□□□□ -0.34
Rnf40-201ENSMUST00000033088 Cnnm3Q32NY4 713 aa12.9□□□□□ -0.34
Rnf40-201ENSMUST00000033088 Tbc1d9Q3UYK3 1264 aa12.9□□□□□ -0.34
Rnf40-201ENSMUST00000033088 Gzf1Q4VBD9 706 aa12.9□□□□□ -0.34
Rnf40-201ENSMUST00000033088 Nap1l3Q794H2 544 aa12.9□□□□□ -0.34
Rnf40-201ENSMUST00000033088 Kcnj4P52189 445 aa12.9□□□□□ -0.34
Rnf40-201ENSMUST00000033088 Ppip5k2Q6ZQB6 1129 aa12.9□□□□□ -0.34
Rnf40-201ENSMUST00000033088 Fam193aQ8CGI1 1231 aaKnown RBP12.9□□□□□ -0.34
Rnf40-201ENSMUST00000033088 Gdpd2Q9ESM6 539 aa12.9□□□□□ -0.34
Rnf40-201ENSMUST00000033088 Talpid3E9PV87 1520 aa12.9□□□□□ -0.35
Rnf40-201ENSMUST00000033088 Pof1bQ8K4L4 587 aa12.89□□□□□ -0.35
Rnf40-201ENSMUST00000033088 Chmp3Q9CQ10 224 aa12.89□□□□□ -0.35
Rnf40-201ENSMUST00000033088 Trpm1Q2TV84 1622 aa12.89□□□□□ -0.35
Rnf40-201ENSMUST00000033088 Cspp1B2RX88 1205 aa12.89□□□□□ -0.35
Rnf40-201ENSMUST00000033088 Dhx30Q99PU8 1217 aaKnown RBP12.89□□□□□ -0.35
Rnf40-201ENSMUST00000033088 Cfap65Q3V0B4 1847 aa12.89□□□□□ -0.35
Rnf40-201ENSMUST00000033088 Dhx16G3X8X0 1044 aaKnown RBP12.88□□□□□ -0.35
Rnf40-201ENSMUST00000033088 F2rP30558 430 aa12.88□□□□□ -0.35
Rnf40-201ENSMUST00000033088 AU022751B1B0V2 589 aa12.88□□□□□ -0.35
Rnf40-201ENSMUST00000033088 CebpzP53569 1052 aaKnown RBP12.88□□□□□ -0.35
Rnf40-201ENSMUST00000033088 CarsQ9ER72 831 aaKnown RBP12.87□□□□□ -0.35
Rnf40-201ENSMUST00000033088 NcapgE9PWG6 1004 aa12.87□□□□□ -0.35
Rnf40-201ENSMUST00000033088 Atp6v1dP57746 247 aa12.87□□□□□ -0.35
Rnf40-201ENSMUST00000033088 NexnQ7TPW1 607 aa12.87□□□□□ -0.35
Rnf40-201ENSMUST00000033088 Naa30Q8CES0 364 aa12.87□□□□□ -0.35
Rnf40-201ENSMUST00000033088 AcrbpQ3V140 540 aa12.86□□□□□ -0.35
Rnf40-201ENSMUST00000033088 Kdm4aQ8BW72 1064 aa12.86□□□□□ -0.35
Rnf40-201ENSMUST00000033088 Cyp46a1Q9WVK8 500 aa12.86□□□□□ -0.35
Rnf40-201ENSMUST00000033088 Gse1Q3U3C9 1213 aa12.86□□□□□ -0.35
Rnf40-201ENSMUST00000033088 Ggnbp2Q5SV77 696 aa12.86□□□□□ -0.35
Rnf40-201ENSMUST00000033088 Ift57Q8BXG3 429 aa12.86□□□□□ -0.35
Rnf40-201ENSMUST00000033088 Akap12Q9WTQ5 1684 aa12.86□□□□□ -0.35
Rnf40-201ENSMUST00000033088 Kif3aP28741 701 aa12.86□□□□□ -0.35
Rnf40-201ENSMUST00000033088 Tbc1d32Q3URV1 1296 aa12.85□□□□□ -0.35
Rnf40-201ENSMUST00000033088 1700010I14RikQ7TPG0 532 aa12.85□□□□□ -0.35
Rnf40-201ENSMUST00000033088 Cabp2Q9JLK4 216 aa12.85□□□□□ -0.35
Rnf40-201ENSMUST00000033088 Abca8aQ8K442 1620 aa12.85□□□□□ -0.35
Rnf40-201ENSMUST00000033088 Tecpr2Q3UH45 1423 aa12.85□□□□□ -0.35
Rnf40-201ENSMUST00000033088 Efcab6Q6P1E8 1516 aa12.85□□□□□ -0.35
Rnf40-201ENSMUST00000033088 Tmc1Q8R4P5 757 aa12.85□□□□□ -0.35
Rnf40-201ENSMUST00000033088 AatkQ80YE4 1365 aa12.85□□□□□ -0.35
Rnf40-201ENSMUST00000033088 Puf60Q3UEB3 564 aaKnown RBP12.85□□□□□ -0.35
Rnf40-201ENSMUST00000033088 Shq1Q7TMX5 569 aa12.85□□□□□ -0.35
Rnf40-201ENSMUST00000033088 Gigyf1Q99MR1 1044 aaKnown RBP12.85□□□□□ -0.35
Rnf40-201ENSMUST00000033088 Kdm2bQ6P1G2 1309 aa12.85□□□□□ -0.35
Rnf40-201ENSMUST00000033088 Adgrb3Q80ZF8 1522 aa12.85□□□□□ -0.35
Rnf40-201ENSMUST00000033088 Adcy5P84309 1262 aa12.84□□□□□ -0.35
Retrieved 100 of 22,080 RNA–protein pairs in 34.2 ms