RNA–Protein interactions for RNA: ENSMUST00000031628.9

Ptcd1-201, Transcript of Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptcd1, Length 3,087 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1-201ENSMUST00000031628 Sptbn5F6UCX4 1208 aa13.39□□□□□ -0.27
Ptcd1-201ENSMUST00000031628 Psme1P97371 249 aa13.39□□□□□ -0.27
Ptcd1-201ENSMUST00000031628 GorabQ8BRM2 368 aa13.39□□□□□ -0.27
Ptcd1-201ENSMUST00000031628 Fbxo3Q9DC63 480 aa13.39□□□□□ -0.27
Ptcd1-201ENSMUST00000031628 Eif2ak4Q9QZ05 1648 aa13.39□□□□□ -0.27
Ptcd1-201ENSMUST00000031628 Pdlim2Q8R1G6 349 aa13.38□□□□□ -0.27
Ptcd1-201ENSMUST00000031628 Kif18aQ91WD7 886 aa13.38□□□□□ -0.27
Ptcd1-201ENSMUST00000031628 Cdc37l1Q9CZP7 335 aa13.38□□□□□ -0.27
Ptcd1-201ENSMUST00000031628 4933402E13RikQ9D4D2 429 aa13.38□□□□□ -0.27
Ptcd1-201ENSMUST00000031628 Ankrd50F7BE84 1390 aa13.38□□□□□ -0.27
Ptcd1-201ENSMUST00000031628 Znf326O88291 580 aa13.38□□□□□ -0.27
Ptcd1-201ENSMUST00000031628 Q3UPC7 1272 aa13.38□□□□□ -0.27
Ptcd1-201ENSMUST00000031628 Plekhm2Q80TQ5 1018 aa13.38□□□□□ -0.27
Ptcd1-201ENSMUST00000031628 Plekhg1F6S200 1446 aa13.37□□□□□ -0.27
Ptcd1-201ENSMUST00000031628 Q4VA45 678 aa13.37□□□□□ -0.27
Ptcd1-201ENSMUST00000031628 PplQ9R269 1755 aa13.37□□□□□ -0.27
Ptcd1-201ENSMUST00000031628 Rfx1P48377 963 aa13.37□□□□□ -0.27
Ptcd1-201ENSMUST00000031628 Usp16Q99LG0 825 aa13.37□□□□□ -0.27
Ptcd1-201ENSMUST00000031628 Nrxn1Q9CS84 1514 aa13.36□□□□□ -0.27
Ptcd1-201ENSMUST00000031628 MpripP97434 1024 aa13.36□□□□□ -0.27
Ptcd1-201ENSMUST00000031628 Map3k19E9Q3S4 1311 aa13.36□□□□□ -0.27
Ptcd1-201ENSMUST00000031628 IghaA0A0A6YXW6 389 aa13.36□□□□□ -0.27
Ptcd1-201ENSMUST00000031628 Phf14Q9D4H9 881 aa13.36□□□□□ -0.27
Ptcd1-201ENSMUST00000031628 Samd1D3YXK1 519 aa13.36□□□□□ -0.27
Ptcd1-201ENSMUST00000031628 Rabep1O35551 862 aa13.36□□□□□ -0.27
Ptcd1-201ENSMUST00000031628 Stk11ipQ3TAA7 1072 aa13.36□□□□□ -0.27
Ptcd1-201ENSMUST00000031628 Abca14E9Q8F8 1683 aa13.35□□□□□ -0.27
Ptcd1-201ENSMUST00000031628 Vsig10D3YX43 558 aa13.35□□□□□ -0.27
Ptcd1-201ENSMUST00000031628 Chd2E9PZM4 1827 aaKnown RBP13.35□□□□□ -0.27
Ptcd1-201ENSMUST00000031628 NktrP30415 1453 aa13.35□□□□□ -0.27
Ptcd1-201ENSMUST00000031628 Ttc21aQ8C0S4 1314 aa13.35□□□□□ -0.27
Ptcd1-201ENSMUST00000031628 Atl3Q91YH5 541 aa13.35□□□□□ -0.27
Ptcd1-201ENSMUST00000031628 Ccdc146E9Q9F7 977 aa13.34□□□□□ -0.27
Ptcd1-201ENSMUST00000031628 Tbc1d32Q3URV1 1296 aa13.34□□□□□ -0.27
Ptcd1-201ENSMUST00000031628 Paxip1Q6NZQ4 1056 aa13.34□□□□□ -0.27
Ptcd1-201ENSMUST00000031628 Zmym3Q9JLM4 1370 aa13.34□□□□□ -0.27
Ptcd1-201ENSMUST00000031628 Dip2aQ8BWT5 1523 aa13.34□□□□□ -0.27
Ptcd1-201ENSMUST00000031628 Catsper2A2ARP9 588 aa13.33□□□□□ -0.27
Ptcd1-201ENSMUST00000031628 Kif20aP97329 887 aa13.33□□□□□ -0.27
Ptcd1-201ENSMUST00000031628 Safb2Q80YR5 991 aaKnown RBP13.33□□□□□ -0.27
Ptcd1-201ENSMUST00000031628 Vamp4O70480 141 aa13.33□□□□□ -0.28
Ptcd1-201ENSMUST00000031628 SkilQ60665 675 aa13.33□□□□□ -0.28
Ptcd1-201ENSMUST00000031628 Irx6Q9ER75 438 aa13.33□□□□□ -0.28
Ptcd1-201ENSMUST00000031628 Alpk3Q924C5 1678 aa13.33□□□□□ -0.28
Ptcd1-201ENSMUST00000031628 Uhrf1bp1lA2RSJ4 1457 aa13.32□□□□□ -0.28
Ptcd1-201ENSMUST00000031628 Map7O88735 730 aa13.32□□□□□ -0.28
Ptcd1-201ENSMUST00000031628 Phlpp2Q8BXA7 1320 aa13.32□□□□□ -0.28
Ptcd1-201ENSMUST00000031628 Plcd3Q8K2J0 785 aa13.32□□□□□ -0.28
Ptcd1-201ENSMUST00000031628 HnrnpmQ9D0E1 729 aaKnown RBP13.32□□□□□ -0.28
Ptcd1-201ENSMUST00000031628 Tfip11Q9ERA6 838 aaKnown RBP13.32□□□□□ -0.28
Ptcd1-201ENSMUST00000031628 Nsd3Q6P2L6 1439 aa13.31□□□□□ -0.28
Ptcd1-201ENSMUST00000031628 FanciQ8K368 1330 aa13.31□□□□□ -0.28
Ptcd1-201ENSMUST00000031628 Aifm3Q3TY86 605 aa13.31□□□□□ -0.28
Ptcd1-201ENSMUST00000031628 AcrbpQ3V140 540 aa13.31□□□□□ -0.28
Ptcd1-201ENSMUST00000031628 Htatsf1Q8BGC0 757 aa13.31□□□□□ -0.28
Ptcd1-201ENSMUST00000031628 Gemin5Q8BX17 1502 aaKnown RBP13.31□□□□□ -0.28
Ptcd1-201ENSMUST00000031628 Adgrl1Q80TR1 1466 aa13.31□□□□□ -0.28
Ptcd1-201ENSMUST00000031628 Cc2d1aQ8K1A6 943 aa13.31□□□□□ -0.28
Ptcd1-201ENSMUST00000031628 Plcb2A3KGF7 1181 aa13.3□□□□□ -0.28
Ptcd1-201ENSMUST00000031628 Triml2E9PW10 424 aa13.3□□□□□ -0.28
Ptcd1-201ENSMUST00000031628 Tmem132aQ922P8 1018 aa13.3□□□□□ -0.28
Ptcd1-201ENSMUST00000031628 Kif2cQ922S8 721 aa13.3□□□□□ -0.28
Ptcd1-201ENSMUST00000031628 Nsfl1cQ9CZ44 370 aaKnown RBP13.3□□□□□ -0.28
Ptcd1-201ENSMUST00000031628 Nwd1A6H603 1563 aa13.3□□□□□ -0.28
Ptcd1-201ENSMUST00000031628 Tnnt2P50752 301 aa13.3□□□□□ -0.28
Ptcd1-201ENSMUST00000031628 Trim28Q62318 834 aa13.29□□□□□ -0.28
Ptcd1-201ENSMUST00000031628 Aldh1l1Q8R0Y6 902 aa13.29□□□□□ -0.28
Ptcd1-201ENSMUST00000031628 Dmrtc1Q9D9R7 182 aa13.29□□□□□ -0.28
Ptcd1-201ENSMUST00000031628 Ccdc171E9Q1U1 1324 aa13.29□□□□□ -0.28
Ptcd1-201ENSMUST00000031628 Ric3Q8BPM6 367 aa13.29□□□□□ -0.28
Ptcd1-201ENSMUST00000031628 Dnajc14Q921R4 703 aa13.29□□□□□ -0.28
Ptcd1-201ENSMUST00000031628 Nek4Q9Z1J2 792 aa13.29□□□□□ -0.28
Ptcd1-201ENSMUST00000031628 Ggnbp2Q5SV77 696 aa13.28□□□□□ -0.28
Ptcd1-201ENSMUST00000031628 Tmc1Q8R4P5 757 aa13.28□□□□□ -0.28
Ptcd1-201ENSMUST00000031628 Snap23O09044 210 aa13.28□□□□□ -0.28
Ptcd1-201ENSMUST00000031628 PogkQ80TC5 607 aa13.28□□□□□ -0.28
Ptcd1-201ENSMUST00000031628 Gnai1B2RSH2 354 aa13.28□□□□□ -0.28
Ptcd1-201ENSMUST00000031628 Ppp1r15aP17564 657 aa13.28□□□□□ -0.28
Ptcd1-201ENSMUST00000031628 Gnai3Q9DC51 354 aa13.28□□□□□ -0.28
Ptcd1-201ENSMUST00000031628 Brd1E9PZ26 1189 aaKnown RBP13.27□□□□□ -0.28
Ptcd1-201ENSMUST00000031628 Smarca5Q91ZW3 1051 aaKnown RBP13.27□□□□□ -0.28
Ptcd1-201ENSMUST00000031628 MvpQ9EQK5 861 aa13.27□□□□□ -0.28
Ptcd1-201ENSMUST00000031628 Pik3r4Q8VD65 1358 aa13.27□□□□□ -0.29
Ptcd1-201ENSMUST00000031628 Fchsd2Q3USJ8 740 aa13.27□□□□□ -0.29
Ptcd1-201ENSMUST00000031628 Rsph6aQ8CDR2 708 aa13.27□□□□□ -0.29
Ptcd1-201ENSMUST00000031628 KnstrnQ9D9Z1 312 aaKnown RBP13.27□□□□□ -0.29
Ptcd1-201ENSMUST00000031628 Slit3Q9WVB4 1523 aa13.26□□□□□ -0.29
Ptcd1-201ENSMUST00000031628 Rrp12Q6P5B0 1295 aaKnown RBP13.26□□□□□ -0.29
Ptcd1-201ENSMUST00000031628 Ciz1Q8VEH2 845 aa13.26□□□□□ -0.29
Ptcd1-201ENSMUST00000031628 Terf2O35144 541 aa13.25□□□□□ -0.29
Ptcd1-201ENSMUST00000031628 Stk31Q99MW1 1018 aa13.25□□□□□ -0.29
Ptcd1-201ENSMUST00000031628 CarsQ9ER72 831 aaKnown RBP13.25□□□□□ -0.29
Ptcd1-201ENSMUST00000031628 Ankrd44B2RXR6 993 aa13.24□□□□□ -0.29
Ptcd1-201ENSMUST00000031628 Ssh1Q76I79 1042 aa13.24□□□□□ -0.29
Ptcd1-201ENSMUST00000031628 Chmp4cQ9D7F7 232 aa13.24□□□□□ -0.29
Ptcd1-201ENSMUST00000031628 PaskQ8CEE6 1383 aa13.24□□□□□ -0.29
Ptcd1-201ENSMUST00000031628 Eif4a2P10630 407 aa13.24□□□□□ -0.29
Ptcd1-201ENSMUST00000031628 CalcaP70160 136 aa13.24□□□□□ -0.29
Ptcd1-201ENSMUST00000031628 Tbc1d9Q3UYK3 1264 aa13.24□□□□□ -0.29
Ptcd1-201ENSMUST00000031628 Tnnt1O88346 262 aa13.24□□□□□ -0.29
Retrieved 100 of 22,080 RNA–protein pairs in 60.2 ms