RNA–Protein interactions for RNA: ENSMUST00000021039.11

Lig3-201, Transcript of DNA ligase 3, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Lig3, Length 5,957 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-201ENSMUST00000021039 Zfp444Q3TDV8 331 aaKnown RBP9.84□□□□□ -0.84
Lig3-201ENSMUST00000021039 Tmem132eQ6IEE6 982 aa9.84□□□□□ -0.84
Lig3-201ENSMUST00000021039 Brpf1B2RRD7 1212 aa9.83□□□□□ -0.84
Lig3-201ENSMUST00000021039 Triml2E9PW10 424 aa9.83□□□□□ -0.84
Lig3-201ENSMUST00000021039 Idi1P58044 227 aa9.83□□□□□ -0.84
Lig3-201ENSMUST00000021039 Stard3nlQ9DCI3 235 aa9.83□□□□□ -0.84
Lig3-201ENSMUST00000021039 Q8C5K5 320 aa9.83□□□□□ -0.84
Lig3-201ENSMUST00000021039 RereQ80TZ9 1558 aa9.83□□□□□ -0.84
Lig3-201ENSMUST00000021039 Tarbp1E9Q368 1579 aa9.82□□□□□ -0.84
Lig3-201ENSMUST00000021039 Ttll13A4Q9F6 804 aa9.82□□□□□ -0.84
Lig3-201ENSMUST00000021039 Ppm1gQ61074 542 aa9.82□□□□□ -0.84
Lig3-201ENSMUST00000021039 Adam1bQ8R534 806 aa9.82□□□□□ -0.84
Lig3-201ENSMUST00000021039 Supt16hQ920B9 1047 aa9.82□□□□□ -0.84
Lig3-201ENSMUST00000021039 Wdr17E9Q271 1322 aa9.82□□□□□ -0.84
Lig3-201ENSMUST00000021039 Hs1bp3Q3TC93 395 aa9.82□□□□□ -0.84
Lig3-201ENSMUST00000021039 BcanQ61361 883 aa9.82□□□□□ -0.84
Lig3-201ENSMUST00000021039 Pde4dQ01063 747 aa9.81□□□□□ -0.84
Lig3-201ENSMUST00000021039 Htatsf1Q8BGC0 757 aa9.81□□□□□ -0.84
Lig3-201ENSMUST00000021039 Trim34aQ99PP6 485 aa9.81□□□□□ -0.84
Lig3-201ENSMUST00000021039 Tns3Q5SSZ5 1440 aa9.81□□□□□ -0.84
Lig3-201ENSMUST00000021039 Bicdl1A0JNT9 577 aa9.81□□□□□ -0.84
Lig3-201ENSMUST00000021039 Mapk8ip1Q9WVI9 707 aa9.81□□□□□ -0.84
Lig3-201ENSMUST00000021039 Eif3aP23116 1344 aaKnown RBP9.8□□□□□ -0.84
Lig3-201ENSMUST00000021039 Amotl2Q8K371 772 aa9.8□□□□□ -0.84
Lig3-201ENSMUST00000021039 Rbm5Q91YE7 815 aaKnown RBP9.8□□□□□ -0.84
Lig3-201ENSMUST00000021039 Plxnc1Q9QZC2 1574 aa9.8□□□□□ -0.84
Lig3-201ENSMUST00000021039 Ccdc146E9Q9F7 977 aa9.8□□□□□ -0.84
Lig3-201ENSMUST00000021039 OptnQ8K3K8 584 aa9.8□□□□□ -0.84
Lig3-201ENSMUST00000021039 Ginm1Q91WR6 327 aa9.8□□□□□ -0.84
Lig3-201ENSMUST00000021039 Dot1lQ6XZL8 1540 aa9.8□□□□□ -0.84
Lig3-201ENSMUST00000021039 Robo2Q7TPD3 1470 aa9.79□□□□□ -0.84
Lig3-201ENSMUST00000021039 Abca6Q8K441 1624 aa9.79□□□□□ -0.84
Lig3-201ENSMUST00000021039 Rims1Q99NE5 1463 aa9.79□□□□□ -0.84
Lig3-201ENSMUST00000021039 Kif24Q6NWW5 1356 aa9.79□□□□□ -0.84
Lig3-201ENSMUST00000021039 Wdhd1P59328 1117 aa9.79□□□□□ -0.84
Lig3-201ENSMUST00000021039 Cers3Q1A3B0 383 aa9.79□□□□□ -0.84
Lig3-201ENSMUST00000021039 Kidins220E9Q9B7 1793 aa9.79□□□□□ -0.84
Lig3-201ENSMUST00000021039 Slc4a3P16283 1227 aa9.79□□□□□ -0.84
Lig3-201ENSMUST00000021039 Rsph6aQ8CDR2 708 aa9.79□□□□□ -0.84
Lig3-201ENSMUST00000021039 Eif4a2P10630 407 aa9.79□□□□□ -0.84
Lig3-201ENSMUST00000021039 Dnai2A2AC93 623 aa9.78□□□□□ -0.84
Lig3-201ENSMUST00000021039 Nlrp3Q8R4B8 1033 aa9.78□□□□□ -0.84
Lig3-201ENSMUST00000021039 Gm16486A0A1D5RMD1 1434 aa9.78□□□□□ -0.84
Lig3-201ENSMUST00000021039 Pank1Q8K4K6 548 aa9.78□□□□□ -0.84
Lig3-201ENSMUST00000021039 Amotl1Q9D4H4 968 aa9.78□□□□□ -0.84
Lig3-201ENSMUST00000021039 Arhgap23Q69ZH9 1483 aa9.78□□□□□ -0.84
Lig3-201ENSMUST00000021039 Hoxc9P09633 260 aa9.78□□□□□ -0.84
Lig3-201ENSMUST00000021039 Arhgef1Q61210 920 aaKnown RBP9.78□□□□□ -0.84
Lig3-201ENSMUST00000021039 Nlgn1Q99K10 843 aa9.78□□□□□ -0.84
Lig3-201ENSMUST00000021039 Abca9Q8K449 1623 aa9.78□□□□□ -0.84
Lig3-201ENSMUST00000021039 Ddb1Q3U1J4 1140 aaKnown RBP9.78□□□□□ -0.84
Lig3-201ENSMUST00000021039 Casc1Q6TDU8 730 aa9.78□□□□□ -0.84
Lig3-201ENSMUST00000021039 Nutm1Q8BHP2 1126 aa9.78□□□□□ -0.84
Lig3-201ENSMUST00000021039 Ccdc155Q80VJ8 648 aa9.78□□□□□ -0.84
Lig3-201ENSMUST00000021039 NgdnQ9DB96 315 aaKnown RBP9.77□□□□□ -0.84
Lig3-201ENSMUST00000021039 Card10P58660 1021 aa9.77□□□□□ -0.85
Lig3-201ENSMUST00000021039 PaskQ8CEE6 1383 aa9.77□□□□□ -0.85
Lig3-201ENSMUST00000021039 CltcQ68FD5 1675 aaKnown RBP9.77□□□□□ -0.85
Lig3-201ENSMUST00000021039 Neurod6P48986 337 aa9.77□□□□□ -0.85
Lig3-201ENSMUST00000021039 Kif21bQ9QXL1 1668 aa9.77□□□□□ -0.85
Lig3-201ENSMUST00000021039 Cul7Q8VE73 1689 aa9.77□□□□□ -0.85
Lig3-201ENSMUST00000021039 Mcm10Q0VBD2 885 aa9.77□□□□□ -0.85
Lig3-201ENSMUST00000021039 Txnrd1Q9JMH6 613 aa9.77□□□□□ -0.85
Lig3-201ENSMUST00000021039 Gprasp1Q5U4C1 1347 aa9.77□□□□□ -0.85
Lig3-201ENSMUST00000021039 Trim34bJ3QNR8 485 aa9.76□□□□□ -0.85
Lig3-201ENSMUST00000021039 Ddx11Q6AXC6 880 aa9.76□□□□□ -0.85
Lig3-201ENSMUST00000021039 Lrrc59Q922Q8 307 aaKnown RBP9.76□□□□□ -0.85
Lig3-201ENSMUST00000021039 Ahdc1Q6PAL7 1594 aaKnown RBP9.76□□□□□ -0.85
Lig3-201ENSMUST00000021039 Pde4bB1AWC9 736 aa9.76□□□□□ -0.85
Lig3-201ENSMUST00000021039 Gnai2P08752 355 aaKnown RBP9.76□□□□□ -0.85
Lig3-201ENSMUST00000021039 CrklP47941 303 aa9.76□□□□□ -0.85
Lig3-201ENSMUST00000021039 Uggt1Q6P5E4 1551 aa9.76□□□□□ -0.85
Lig3-201ENSMUST00000021039 Pm20d1Q8C165 503 aa9.76□□□□□ -0.85
Lig3-201ENSMUST00000021039 Eif2s2Q99L45 331 aaKnown RBP9.76□□□□□ -0.85
Lig3-201ENSMUST00000021039 CastP51125 788 aa9.76□□□□□ -0.85
Lig3-201ENSMUST00000021039 Atf7ipQ7TT18 1306 aa9.76□□□□□ -0.85
Lig3-201ENSMUST00000021039 Tulp4Q9JIL5 1547 aa9.76□□□□□ -0.85
Lig3-201ENSMUST00000021039 Cdc42bpbQ7TT50 1713 aa9.76□□□□□ -0.85
Lig3-201ENSMUST00000021039 Skap1Q3UUV5 355 aa9.75□□□□□ -0.85
Lig3-201ENSMUST00000021039 ThemisQ8BGW0 636 aa9.75□□□□□ -0.85
Lig3-201ENSMUST00000021039 Ankrd13dQ6PD24 605 aa9.75□□□□□ -0.85
Lig3-201ENSMUST00000021039 Erc2Q6PH08 957 aa9.75□□□□□ -0.85
Lig3-201ENSMUST00000021039 Dnajc5gQ8C632 165 aa9.74□□□□□ -0.85
Lig3-201ENSMUST00000021039 Ddx17Q501J6 650 aaKnown RBP9.74□□□□□ -0.85
Lig3-201ENSMUST00000021039 Ncoa4Q5U4H9 625 aa9.74□□□□□ -0.85
Lig3-201ENSMUST00000021039 Atl3Q91YH5 541 aa9.74□□□□□ -0.85
Lig3-201ENSMUST00000021039 Myo3aQ8K3H5 1613 aa9.74□□□□□ -0.85
Lig3-201ENSMUST00000021039 Exoc6bA6H5Z3 810 aa9.74□□□□□ -0.85
Lig3-201ENSMUST00000021039 Eif2ak4Q9QZ05 1648 aa9.74□□□□□ -0.85
Lig3-201ENSMUST00000021039 Plcd4Q8K3R3 807 aa9.74□□□□□ -0.85
Lig3-201ENSMUST00000021039 Fkbp5Q64378 456 aa9.73□□□□□ -0.85
Lig3-201ENSMUST00000021039 Dhx16G3X8X0 1044 aaKnown RBP9.73□□□□□ -0.85
Lig3-201ENSMUST00000021039 Eya1P97767 591 aa9.73□□□□□ -0.85
Lig3-201ENSMUST00000021039 Ccnl1Q52KE7 532 aaKnown RBP9.73□□□□□ -0.85
Lig3-201ENSMUST00000021039 Prr29B1ARI9 187 aa9.73□□□□□ -0.85
Lig3-201ENSMUST00000021039 Ankib1Q6ZPS6 1085 aa9.73□□□□□ -0.85
Lig3-201ENSMUST00000021039 Mfap1aC0HKD8 439 aaKnown RBP9.73□□□□□ -0.85
Lig3-201ENSMUST00000021039 Mfap1bC0HKD9 439 aaKnown RBP9.73□□□□□ -0.85
Lig3-201ENSMUST00000021039 Ttc19Q8CC21 365 aa9.73□□□□□ -0.85
Lig3-201ENSMUST00000021039 Akap12Q9WTQ5 1684 aa9.73□□□□□ -0.85
Retrieved 100 of 22,080 RNA–protein pairs in 20.8 ms