RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 SGCDQ92629 289 aa5.5□□□□□ -1.53
VPS50-202ENST00000305866 ZUFSPQ96AP4 578 aa5.5□□□□□ -1.53
VPS50-202ENST00000305866 PGBD4Q96DM1 585 aa5.5□□□□□ -1.53
VPS50-202ENST00000305866 NPAS2Q99743 824 aa5.5□□□□□ -1.53
VPS50-202ENST00000305866 C19orf43Q9BQ61 176 aa5.5□□□□□ -1.53
VPS50-202ENST00000305866 HIPK3Q9H422 1215 aa5.5□□□□□ -1.53
VPS50-202ENST00000305866 SPON1Q9HCB6 807 aa5.5□□□□□ -1.53
VPS50-202ENST00000305866 PIH1D1Q9NWS0 290 aaKnown RBP5.5□□□□□ -1.53
VPS50-202ENST00000305866 NSMCE4AQ9NXX6 385 aa5.5□□□□□ -1.53
VPS50-202ENST00000305866 ZNF225Q9UK10 706 aa5.5□□□□□ -1.53
VPS50-202ENST00000305866 RIMKLBQ9ULI2 386 aa5.5□□□□□ -1.53
VPS50-202ENST00000305866 UBQLN1Q9UMX0 589 aaKnown RBP5.5□□□□□ -1.53
VPS50-202ENST00000305866 SCAF8Q9UPN6 1271 aaKnown RBP5.5□□□□□ -1.53
VPS50-202ENST00000305866 NPHS1O60500 1241 aa5.5□□□□□ -1.53
VPS50-202ENST00000305866 AHSGP02765 367 aa5.5□□□□□ -1.53
VPS50-202ENST00000305866 RPLP2P05387 115 aaKnown RBP5.5□□□□□ -1.53
VPS50-202ENST00000305866 APOA4P06727 396 aa5.5□□□□□ -1.53
VPS50-202ENST00000305866 TCF3P15923 654 aa5.5□□□□□ -1.53
VPS50-202ENST00000305866 PSMB4P28070 264 aa5.5□□□□□ -1.53
VPS50-202ENST00000305866 GP5P40197 560 aa5.5□□□□□ -1.53
VPS50-202ENST00000305866 SLC26A3P40879 764 aa5.5□□□□□ -1.53
VPS50-202ENST00000305866 CXCR3P49682 368 aa5.5□□□□□ -1.53
VPS50-202ENST00000305866 PKNOX1P55347 436 aa5.5□□□□□ -1.53
VPS50-202ENST00000305866 FKBP1BP68106 108 aa5.5□□□□□ -1.53
VPS50-202ENST00000305866 IFITM2Q01629 132 aa5.5□□□□□ -1.53
VPS50-202ENST00000305866 GRM3Q14832 879 aa5.5□□□□□ -1.53
VPS50-202ENST00000305866 CTF1Q16619 201 aa5.5□□□□□ -1.53
VPS50-202ENST00000305866 FGD3Q5JSP0 725 aa5.5□□□□□ -1.53
VPS50-202ENST00000305866 LIPMQ5VYY2 423 aa5.5□□□□□ -1.53
VPS50-202ENST00000305866 LCN8Q6JVE9 175 aa5.5□□□□□ -1.53
VPS50-202ENST00000305866 KYQ8NBH2 561 aa5.5□□□□□ -1.53
VPS50-202ENST00000305866 GOLM1Q8NBJ4 401 aa5.5□□□□□ -1.53
VPS50-202ENST00000305866 ZNF420Q8TAQ5 688 aaPredicted RBP5.5□□□□□ -1.53
VPS50-202ENST00000305866 MYRFLQ96LU7 910 aa5.5□□□□□ -1.53
VPS50-202ENST00000305866 UPF3AQ9H1J1 476 aaKnown RBP5.5□□□□□ -1.53
VPS50-202ENST00000305866 GBA3Q9H227 469 aa5.5□□□□□ -1.53
VPS50-202ENST00000305866 WDR41Q9HAD4 459 aa5.5□□□□□ -1.53
VPS50-202ENST00000305866 FBXW11Q9UKB1 542 aa5.5□□□□□ -1.53
VPS50-202ENST00000305866 G3BP2Q9UN86 482 aaKnown RBP5.5□□□□□ -1.53
VPS50-202ENST00000305866 TDRKHQ9Y2W6 561 aaKnown RBP5.5□□□□□ -1.53
VPS50-202ENST00000305866 PTCH2Q9Y6C5 1203 aa5.5□□□□□ -1.53
VPS50-202ENST00000305866 A0A087WZ62 844 aa5.49□□□□□ -1.53
VPS50-202ENST00000305866 KCNU1A8MYU2 1149 aa5.49□□□□□ -1.53
VPS50-202ENST00000305866 TRIM38O00635 465 aa5.49□□□□□ -1.53
VPS50-202ENST00000305866 AURKAO14965 403 aa5.49□□□□□ -1.53
VPS50-202ENST00000305866 RASAL1O95294 804 aa5.49□□□□□ -1.53
VPS50-202ENST00000305866 TFPTP0C1Z6 253 aa5.49□□□□□ -1.53
VPS50-202ENST00000305866 C7P10643 843 aa5.49□□□□□ -1.53
VPS50-202ENST00000305866 HSD17B1P14061 328 aa5.49□□□□□ -1.53
VPS50-202ENST00000305866 SDC4P31431 198 aa5.49□□□□□ -1.53
VPS50-202ENST00000305866 IDUAP35475 653 aa5.49□□□□□ -1.53
VPS50-202ENST00000305866 MLH1P40692 756 aa5.49□□□□□ -1.53
VPS50-202ENST00000305866 RXRGP48443 463 aa5.49□□□□□ -1.53
VPS50-202ENST00000305866 APLP1P51693 650 aa5.49□□□□□ -1.53
VPS50-202ENST00000305866 BCAR1P56945 870 aa5.49□□□□□ -1.53
VPS50-202ENST00000305866 NFKB2Q00653 900 aa5.49□□□□□ -1.53
VPS50-202ENST00000305866 ACVR1Q04771 509 aa5.49□□□□□ -1.53
VPS50-202ENST00000305866 MGAT3Q09327 533 aa5.49□□□□□ -1.53
VPS50-202ENST00000305866 DOC2BQ14184 412 aa5.49□□□□□ -1.53
VPS50-202ENST00000305866 RAB39AQ14964 217 aa5.49□□□□□ -1.53
VPS50-202ENST00000305866 POLD3Q15054 466 aaPredicted RBP5.49□□□□□ -1.53
VPS50-202ENST00000305866 ZNF618Q5T7W0 954 aa5.49□□□□□ -1.53
VPS50-202ENST00000305866 REP15Q6BDI9 236 aa5.49□□□□□ -1.53
VPS50-202ENST00000305866 CD300LGQ6UXG3 332 aa5.49□□□□□ -1.53
VPS50-202ENST00000305866 SCARA5Q6ZMJ2 495 aa5.49□□□□□ -1.53
VPS50-202ENST00000305866 RNF165Q6ZSG1 346 aa5.49□□□□□ -1.53
VPS50-202ENST00000305866 COLGALT2Q8IYK4 626 aa5.49□□□□□ -1.53
VPS50-202ENST00000305866 CMTR2Q8IYT2 770 aaKnown RBP5.49□□□□□ -1.53
VPS50-202ENST00000305866 TMEM86AQ8N2M4 240 aa5.49□□□□□ -1.53
VPS50-202ENST00000305866 LRRC71Q8N4P6 559 aa5.49□□□□□ -1.53
VPS50-202ENST00000305866 PACRGLQ8N7B6 248 aa5.49□□□□□ -1.53
VPS50-202ENST00000305866 SMG8Q8ND04 991 aaKnown RBP5.49□□□□□ -1.53
VPS50-202ENST00000305866 ICA1LQ8NDH6 482 aa5.49□□□□□ -1.53
VPS50-202ENST00000305866 TSPAN14Q8NG11 270 aa5.49□□□□□ -1.53
VPS50-202ENST00000305866 URGCPQ8TCY9 931 aa5.49□□□□□ -1.53
VPS50-202ENST00000305866 SLC22A17Q8WUG5 538 aa5.49□□□□□ -1.53
VPS50-202ENST00000305866 PEX13Q92968 403 aa5.49□□□□□ -1.53
VPS50-202ENST00000305866 HHIPQ96QV1 700 aa5.49□□□□□ -1.53
VPS50-202ENST00000305866 FDXACB1Q9BRP7 624 aaPredicted RBP5.49□□□□□ -1.53
VPS50-202ENST00000305866 OSBPL11Q9BXB4 747 aa5.49□□□□□ -1.53
VPS50-202ENST00000305866 SEZ6LQ9BYH1 1024 aa5.49□□□□□ -1.53
VPS50-202ENST00000305866 UNC93B1Q9H1C4 597 aa5.49□□□□□ -1.53
VPS50-202ENST00000305866 GPN2Q9H9Y4 310 aaPredicted RBP5.49□□□□□ -1.53
VPS50-202ENST00000305866 TCF7L2Q9NQB0 619 aa5.49□□□□□ -1.53
VPS50-202ENST00000305866 CMTM6Q9NX76 183 aa5.49□□□□□ -1.53
VPS50-202ENST00000305866 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.49□□□□□ -1.53
VPS50-202ENST00000305866 ZNF219Q9P2Y4 722 aaPredicted RBP5.49□□□□□ -1.53
VPS50-202ENST00000305866 HEY1Q9Y5J3 304 aa5.49□□□□□ -1.53
VPS50-202ENST00000305866 SNX9Q9Y5X1 595 aa5.49□□□□□ -1.53
VPS50-202ENST00000305866 LOC100653049A0A140TA62 436 aa5.49□□□□□ -1.53
VPS50-202ENST00000305866 KRT34O76011 436 aa5.49□□□□□ -1.53
VPS50-202ENST00000305866 BAG2O95816 211 aa5.49□□□□□ -1.53
VPS50-202ENST00000305866 TXNP10599 105 aaKnown RBP5.49□□□□□ -1.53
VPS50-202ENST00000305866 CD19P15391 556 aa5.49□□□□□ -1.53
VPS50-202ENST00000305866 CD9P21926 228 aa5.49□□□□□ -1.53
VPS50-202ENST00000305866 NMBRP28336 390 aa5.49□□□□□ -1.53
VPS50-202ENST00000305866 GRIA4P48058 902 aa5.49□□□□□ -1.53
VPS50-202ENST00000305866 RPL14P50914 215 aaKnown RBP5.49□□□□□ -1.53
VPS50-202ENST00000305866 BMXP51813 675 aa5.49□□□□□ -1.53
VPS50-202ENST00000305866 EPHB1P54762 984 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms