RNA–Protein interactions for RNA: ENST00000377270.7

FXN-201, Transcript of frataxin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FXN, Length 2,608 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-201ENST00000377270 INAVAQ3KP66 663 aa15.68■□□□□ 0.1
FXN-201ENST00000377270 LRIT3Q3SXY7 679 aa15.68■□□□□ 0.1
FXN-201ENST00000377270 GALNT18Q6P9A2 607 aa15.68■□□□□ 0.1
FXN-201ENST00000377270 BNC2Q6ZN30 1099 aaPredicted RBP15.68■□□□□ 0.1
FXN-201ENST00000377270 FIG4Q92562 907 aa15.68■□□□□ 0.1
FXN-201ENST00000377270 C16orf70Q9BSU1 422 aa15.68■□□□□ 0.1
FXN-201ENST00000377270 RPF2Q9H7B2 306 aaKnown RBP15.68■□□□□ 0.1
FXN-201ENST00000377270 PCDH9Q9HC56 1237 aa15.68■□□□□ 0.1
FXN-201ENST00000377270 ATP13A2Q9NQ11 1180 aa15.68■□□□□ 0.1
FXN-201ENST00000377270 SHOC2Q9UQ13 582 aa15.68■□□□□ 0.1
FXN-201ENST00000377270 TRAF6Q9Y4K3 522 aa15.68■□□□□ 0.1
FXN-201ENST00000377270 H3BRB1 525 aa15.67■□□□□ 0.1
FXN-201ENST00000377270 PIK3R2O00459 728 aa15.67■□□□□ 0.1
FXN-201ENST00000377270 EPN2O95208 641 aa15.67■□□□□ 0.1
FXN-201ENST00000377270 AOC1P19801 751 aa15.67■□□□□ 0.1
FXN-201ENST00000377270 CD9P21926 228 aa15.67■□□□□ 0.1
FXN-201ENST00000377270 AQP5P55064 265 aa15.67■□□□□ 0.1
FXN-201ENST00000377270 RACK1P63244 317 aaKnown RBP15.67■□□□□ 0.1
FXN-201ENST00000377270 RHAGQ02094 409 aa15.67■□□□□ 0.1
FXN-201ENST00000377270 TAF5Q15542 800 aa15.67■□□□□ 0.1
FXN-201ENST00000377270 PGM2L1Q6PCE3 622 aa15.67■□□□□ 0.1
FXN-201ENST00000377270 CORO6Q6QEF8 472 aa15.67■□□□□ 0.1
FXN-201ENST00000377270 FBXL6Q8N531 539 aa15.67■□□□□ 0.1
FXN-201ENST00000377270 ADPGKQ9BRR6 497 aa15.67■□□□□ 0.1
FXN-201ENST00000377270 VRTNQ9H8Y1 702 aa15.67■□□□□ 0.1
FXN-201ENST00000377270 DPP3Q9NY33 737 aa15.67■□□□□ 0.1
FXN-201ENST00000377270 GNEQ9Y223 722 aaKnown RBP15.67■□□□□ 0.1
FXN-201ENST00000377270 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.67■□□□□ 0.1
FXN-201ENST00000377270 ZNF701M0R085 212 aaPredicted RBP15.67■□□□□ 0.1
FXN-201ENST00000377270 SLC9A3R1O14745 358 aaPredicted RBP15.67■□□□□ 0.1
FXN-201ENST00000377270 ATF4P18848 351 aaPredicted RBP15.67■□□□□ 0.1
FXN-201ENST00000377270 MIPP30301 263 aa15.67■□□□□ 0.1
FXN-201ENST00000377270 NDST1P52848 882 aa15.67■□□□□ 0.1
FXN-201ENST00000377270 UBAP2LQ14157 1087 aaKnown RBP15.67■□□□□ 0.1
FXN-201ENST00000377270 HIF1AQ16665 826 aa15.67■□□□□ 0.1
FXN-201ENST00000377270 RALGPS1Q5JS13 557 aa15.67■□□□□ 0.1
FXN-201ENST00000377270 FAM102AQ5T9C2 384 aaPredicted RBP15.67■□□□□ 0.1
FXN-201ENST00000377270 SLX4IPQ5VYV7 408 aa15.67■□□□□ 0.1
FXN-201ENST00000377270 FAM9CQ8IZT9 166 aa15.67■□□□□ 0.1
FXN-201ENST00000377270 AADATQ8N5Z0 425 aa15.67■□□□□ 0.1
FXN-201ENST00000377270 TTC13Q8NBP0 860 aa15.67■□□□□ 0.1
FXN-201ENST00000377270 RASSF5Q8WWW0 418 aa15.67■□□□□ 0.1
FXN-201ENST00000377270 VPS33AQ96AX1 596 aa15.67■□□□□ 0.1
FXN-201ENST00000377270 MCRS1Q96EZ8 462 aa15.67■□□□□ 0.1
FXN-201ENST00000377270 RILPQ96NA2 401 aa15.67■□□□□ 0.1
FXN-201ENST00000377270 DNMT3BQ9UBC3 853 aaKnown RBP15.67■□□□□ 0.1
FXN-201ENST00000377270 LRRC72A6NJI9 287 aa15.66■□□□□ 0.1
FXN-201ENST00000377270 H3BMQ9 156 aa15.66■□□□□ 0.1
FXN-201ENST00000377270 OR5F1O95221 314 aa15.66■□□□□ 0.1
FXN-201ENST00000377270 HMGCRP04035 888 aa15.66■□□□□ 0.1
FXN-201ENST00000377270 CDH1P12830 882 aa15.66■□□□□ 0.1
FXN-201ENST00000377270 GFAPP14136 432 aa15.66■□□□□ 0.1
FXN-201ENST00000377270 GABRB3P28472 473 aa15.66■□□□□ 0.1
FXN-201ENST00000377270 RBP5P82980 135 aa15.66■□□□□ 0.1
FXN-201ENST00000377270 SLC18A2Q05940 514 aa15.66■□□□□ 0.1
FXN-201ENST00000377270 DNASE1L3Q13609 305 aa15.66■□□□□ 0.1
FXN-201ENST00000377270 AARS2Q5JTZ9 985 aaKnown RBP15.66■□□□□ 0.1
FXN-201ENST00000377270 LDLRAD1Q5T700 205 aa15.66■□□□□ 0.1
FXN-201ENST00000377270 BBS12Q6ZW61 710 aa15.66■□□□□ 0.1
FXN-201ENST00000377270 RFX6Q8HWS3 928 aa15.66■□□□□ 0.1
FXN-201ENST00000377270 OR10Z1Q8NGY1 313 aa15.66■□□□□ 0.1
FXN-201ENST00000377270 SERAC1Q96JX3 654 aa15.66■□□□□ 0.1
FXN-201ENST00000377270 COG8Q96MW5 612 aa15.66■□□□□ 0.1
FXN-201ENST00000377270 CITED4Q96RK1 184 aa15.66■□□□□ 0.1
FXN-201ENST00000377270 TRIM39Q9HCM9 518 aa15.66■□□□□ 0.1
FXN-201ENST00000377270 SORCS3Q9UPU3 1222 aa15.66■□□□□ 0.1
FXN-201ENST00000377270 UGT2A1Q9Y4X1 527 aa15.66■□□□□ 0.1
FXN-201ENST00000377270 TRIM64A6NGJ6 449 aa15.66■□□□□ 0.1
FXN-201ENST00000377270 TRIM64BA6NI03 449 aa15.66■□□□□ 0.1
FXN-201ENST00000377270 ERVH48-1M5A8F1 160 aa15.66■□□□□ 0.1
FXN-201ENST00000377270 PDHXO00330 501 aa15.66■□□□□ 0.1
FXN-201ENST00000377270 SORBS2O94875 1100 aaKnown RBP15.66■□□□□ 0.1
FXN-201ENST00000377270 GABRB2P47870 512 aa15.66■□□□□ 0.1
FXN-201ENST00000377270 GDF10P55107 478 aa15.66■□□□□ 0.1
FXN-201ENST00000377270 CDKL1Q00532 357 aa15.66■□□□□ 0.1
FXN-201ENST00000377270 POU6F1Q14863 301 aa15.66■□□□□ 0.1
FXN-201ENST00000377270 KYAT1Q16773 422 aa15.66■□□□□ 0.1
FXN-201ENST00000377270 TAB3Q8N5C8 712 aaPredicted RBP15.66■□□□□ 0.1
FXN-201ENST00000377270 CCDC124Q96CT7 223 aaKnown RBP15.66■□□□□ 0.1
FXN-201ENST00000377270 KIF12Q96FN5 646 aa15.66■□□□□ 0.1
FXN-201ENST00000377270 CLSTN3Q9BQT9 956 aa15.66■□□□□ 0.1
FXN-201ENST00000377270 MKRN2Q9H000 416 aaKnown RBP15.66■□□□□ 0.1
FXN-201ENST00000377270 IFT22Q9H7X7 185 aa15.66■□□□□ 0.1
FXN-201ENST00000377270 SPON1Q9HCB6 807 aa15.66■□□□□ 0.1
FXN-201ENST00000377270 SCUBE2Q9NQ36 999 aa15.66■□□□□ 0.1
FXN-201ENST00000377270 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.66■□□□□ 0.1
FXN-201ENST00000377270 KLHL42Q9P2K6 505 aa15.66■□□□□ 0.1
FXN-201ENST00000377270 CDH22Q9UJ99 828 aa15.66■□□□□ 0.1
FXN-201ENST00000377270 ITGA11Q9UKX5 1188 aa15.66■□□□□ 0.1
FXN-201ENST00000377270 USP18Q9UMW8 372 aa15.66■□□□□ 0.1
FXN-201ENST00000377270 SF3B1O75533 1304 aaKnown RBP eCLIP15.66■□□□□ 0.11e-7■■■■■ 172.3
FXN-201ENST00000377270 IQANK1A0A1B0GTG1 560 aa15.65■□□□□ 0.1
FXN-201ENST00000377270 MEN1O00255 615 aa15.65■□□□□ 0.1
FXN-201ENST00000377270 NELFEP18615 380 aaKnown RBP15.65■□□□□ 0.1
FXN-201ENST00000377270 ATF6P18850 670 aa15.65■□□□□ 0.1
FXN-201ENST00000377270 HPCAL1P37235 193 aa15.65■□□□□ 0.1
FXN-201ENST00000377270 NR2C2P49116 596 aa15.65■□□□□ 0.1
FXN-201ENST00000377270 BST1Q10588 318 aa15.65■□□□□ 0.1
FXN-201ENST00000377270 ATG16L1Q676U5 607 aa15.65■□□□□ 0.1
FXN-201ENST00000377270 RSAD2Q8WXG1 361 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms