RNA–Protein interactions for RNA: ENSMUST00000028769.12

Ptpra-201, Transcript of Receptor-type tyrosine-protein phosphatase alpha, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptpra, Length 3,227 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpra-201ENSMUST00000028769 Jph2Q9ET78 696 aa18.02■□□□□ 0.48
Ptpra-201ENSMUST00000028769 C1qtnf1Q9QXP7 281 aa18.02■□□□□ 0.48
Ptpra-201ENSMUST00000028769 Cldn3Q9Z0G9 219 aa18.02■□□□□ 0.48
Ptpra-201ENSMUST00000028769 Pcdh7A0A0A6YY83 1255 aa18.02■□□□□ 0.48
Ptpra-201ENSMUST00000028769 Akap5D3YVF0 745 aa18.02■□□□□ 0.48
Ptpra-201ENSMUST00000028769 Matn2O08746 956 aa18.02■□□□□ 0.48
Ptpra-201ENSMUST00000028769 Dpy19l2P0CW70 773 aa18.02■□□□□ 0.48
Ptpra-201ENSMUST00000028769 Gpc4P51655 557 aa18.02■□□□□ 0.48
Ptpra-201ENSMUST00000028769 Hrh2P97292 397 aa18.02■□□□□ 0.48
Ptpra-201ENSMUST00000028769 SelpQ01102 768 aa18.02■□□□□ 0.48
Ptpra-201ENSMUST00000028769 SPINDOCQ05AH6 381 aa18.02■□□□□ 0.48
Ptpra-201ENSMUST00000028769 Tmed1Q3V009 227 aa18.02■□□□□ 0.48
Ptpra-201ENSMUST00000028769 Mief2Q5NCS9 454 aa18.02■□□□□ 0.48
Ptpra-201ENSMUST00000028769 Dnajc1Q61712 552 aaKnown RBP18.02■□□□□ 0.48
Ptpra-201ENSMUST00000028769 Abcg2Q7TMS5 657 aa18.02■□□□□ 0.48
Ptpra-201ENSMUST00000028769 Fbxw7Q8VBV4 629 aa18.02■□□□□ 0.48
Ptpra-201ENSMUST00000028769 CtsqQ91ZF4 343 aa18.02■□□□□ 0.48
Ptpra-201ENSMUST00000028769 Ppp6cQ9CQR6 305 aa18.02■□□□□ 0.48
Ptpra-201ENSMUST00000028769 Il17rbQ9JIP3 499 aa18.02■□□□□ 0.48
Ptpra-201ENSMUST00000028769 Copg1Q9QZE5 874 aa18.02■□□□□ 0.48
Ptpra-201ENSMUST00000028769 Morc1Q9WVL5 950 aa18.02■□□□□ 0.48
Ptpra-201ENSMUST00000028769 Zfp985A2A7A5 519 aa18.02■□□□□ 0.47
Ptpra-201ENSMUST00000028769 Ssxb8B1AY40 170 aa18.02■□□□□ 0.47
Ptpra-201ENSMUST00000028769 1700024B05RikE9Q6D7 167 aa18.02■□□□□ 0.47
Ptpra-201ENSMUST00000028769 SmgcF6VRN1 385 aa18.02■□□□□ 0.47
Ptpra-201ENSMUST00000028769 Akain1G3UWD5 69 aa18.02■□□□□ 0.47
Ptpra-201ENSMUST00000028769 Hmgxb3G3X9M3 1254 aa18.02■□□□□ 0.47
Ptpra-201ENSMUST00000028769 CrymO54983 313 aa18.02■□□□□ 0.47
Ptpra-201ENSMUST00000028769 Pou5f1P20263 352 aaKnown RBP18.02■□□□□ 0.47
Ptpra-201ENSMUST00000028769 Atp6v0d1P51863 351 aa18.02■□□□□ 0.47
Ptpra-201ENSMUST00000028769 ThraP63058 492 aa18.02■□□□□ 0.47
Ptpra-201ENSMUST00000028769 Polr1bP70700 1135 aa18.02■□□□□ 0.47
Ptpra-201ENSMUST00000028769 Muc1Q02496 630 aa18.02■□□□□ 0.47
Ptpra-201ENSMUST00000028769 Krt32Q62168 407 aa18.02■□□□□ 0.47
Ptpra-201ENSMUST00000028769 Podnl1Q6P3Y9 559 aa18.02■□□□□ 0.47
Ptpra-201ENSMUST00000028769 Ssxb3Q6XAS4 170 aa18.02■□□□□ 0.47
Ptpra-201ENSMUST00000028769 BoraQ8BS90 525 aa18.02■□□□□ 0.47
Ptpra-201ENSMUST00000028769 Ccdc151Q8BSN3 593 aa18.02■□□□□ 0.47
Ptpra-201ENSMUST00000028769 Tmem154Q8C4Q9 181 aa18.02■□□□□ 0.47
Ptpra-201ENSMUST00000028769 Fam114a2Q8VE88 497 aa18.02■□□□□ 0.47
Ptpra-201ENSMUST00000028769 Serpina3nQ91WP6 418 aa18.02■□□□□ 0.47
Ptpra-201ENSMUST00000028769 Lysmd3Q99LE3 305 aa18.02■□□□□ 0.47
Ptpra-201ENSMUST00000028769 Angptl2Q9R045 493 aa18.02■□□□□ 0.47
Ptpra-201ENSMUST00000028769 Trbv4A0A075B5I2 113 aa18.01■□□□□ 0.47
Ptpra-201ENSMUST00000028769 Trim5E9PV98 497 aa18.01■□□□□ 0.47
Ptpra-201ENSMUST00000028769 NcstnP57716 708 aa18.01■□□□□ 0.47
Ptpra-201ENSMUST00000028769 Cdk7Q03147 346 aa18.01■□□□□ 0.47
Ptpra-201ENSMUST00000028769 Srbd1Q497V5 1015 aaKnown RBP18.01■□□□□ 0.47
Ptpra-201ENSMUST00000028769 Olfr463Q5SW49 311 aa18.01■□□□□ 0.47
Ptpra-201ENSMUST00000028769 Olfr462Q5SW50 311 aa18.01■□□□□ 0.47
Ptpra-201ENSMUST00000028769 Tas2r129Q7M709 320 aa18.01■□□□□ 0.47
Ptpra-201ENSMUST00000028769 Tmem121Q80XA0 318 aa18.01■□□□□ 0.47
Ptpra-201ENSMUST00000028769 Atp2c1Q80XR2 918 aa18.01■□□□□ 0.47
Ptpra-201ENSMUST00000028769 NamptQ99KQ4 491 aa18.01■□□□□ 0.47
Ptpra-201ENSMUST00000028769 Rnf111Q99ML9 989 aa18.01■□□□□ 0.47
Ptpra-201ENSMUST00000028769 Rwdd4Q9CPR1 188 aa18.01■□□□□ 0.47
Ptpra-201ENSMUST00000028769 Msl3Q9WVG9 525 aa18.01■□□□□ 0.47
Ptpra-201ENSMUST00000028769 Grin3aA2AIR5 1135 aa18.01■□□□□ 0.47
Ptpra-201ENSMUST00000028769 Klhl32A2AJX0 620 aa18.01■□□□□ 0.47
Ptpra-201ENSMUST00000028769 Vmn2r65G3X931 845 aa18.01■□□□□ 0.47
Ptpra-201ENSMUST00000028769 IkbkgO88522 412 aa18.01■□□□□ 0.47
Ptpra-201ENSMUST00000028769 Crhr1P35347 415 aa18.01■□□□□ 0.47
Ptpra-201ENSMUST00000028769 Elk4P41158 430 aa18.01■□□□□ 0.47
Ptpra-201ENSMUST00000028769 Timm13P62075 95 aa18.01■□□□□ 0.47
Ptpra-201ENSMUST00000028769 Gata6Q61169 589 aa18.01■□□□□ 0.47
Ptpra-201ENSMUST00000028769 Arhgap11aQ80Y19 987 aa18.01■□□□□ 0.47
Ptpra-201ENSMUST00000028769 PigxQ99LV7 254 aa18.01■□□□□ 0.47
Ptpra-201ENSMUST00000028769 Them5Q9CQJ0 248 aa18.01■□□□□ 0.47
Ptpra-201ENSMUST00000028769 Pgm3Q9CYR6 542 aa18.01■□□□□ 0.47
Ptpra-201ENSMUST00000028769 St6galnac4Q9R2B6 360 aa18.01■□□□□ 0.47
Ptpra-201ENSMUST00000028769 VarsQ9Z1Q9 1263 aaKnown RBP18.01■□□□□ 0.47
Ptpra-201ENSMUST00000028769 Shroom3Q9QXN0 1986 aa18.01■□□□□ 0.47
Ptpra-201ENSMUST00000028769 Numa1E9Q7G0 2094 aaKnown RBP18.01■□□□□ 0.47
Ptpra-201ENSMUST00000028769 Ccdc120A2AEV7 629 aa18■□□□□ 0.47
Ptpra-201ENSMUST00000028769 Ttll8A4Q9F1 832 aa18■□□□□ 0.47
Ptpra-201ENSMUST00000028769 Cyp2w1E9Q816 493 aa18■□□□□ 0.47
Ptpra-201ENSMUST00000028769 Got2P05202 430 aaKnown RBP18■□□□□ 0.47
Ptpra-201ENSMUST00000028769 Cd72P21855 354 aa18■□□□□ 0.47
Ptpra-201ENSMUST00000028769 Apobec1P51908 229 aaKnown RBP18■□□□□ 0.47
Ptpra-201ENSMUST00000028769 Gucy2eP52785 1108 aa18■□□□□ 0.47
Ptpra-201ENSMUST00000028769 Hsdl2Q2TPA8 490 aaKnown RBP18■□□□□ 0.47
Ptpra-201ENSMUST00000028769 Sarm1Q6PDS3 724 aa18■□□□□ 0.47
Ptpra-201ENSMUST00000028769 Mib1Q80SY4 1006 aa18■□□□□ 0.47
Ptpra-201ENSMUST00000028769 Lrfn2Q80TG9 788 aa18■□□□□ 0.47
Ptpra-201ENSMUST00000028769 Hmgxb4Q80Y32 594 aaKnown RBP18■□□□□ 0.47
Ptpra-201ENSMUST00000028769 Mapkap1Q8BKH7 522 aa18■□□□□ 0.47
Ptpra-201ENSMUST00000028769 Slc18a2Q8BRU6 517 aa18■□□□□ 0.47
Ptpra-201ENSMUST00000028769 Rap2cQ8BU31 183 aa18■□□□□ 0.47
Ptpra-201ENSMUST00000028769 Tbc1d17Q8BYH7 645 aa18■□□□□ 0.47
Ptpra-201ENSMUST00000028769 Traf7Q922B6 594 aa18■□□□□ 0.47
Ptpra-201ENSMUST00000028769 MrrfQ9D6S7 262 aaKnown RBP18■□□□□ 0.47
Ptpra-201ENSMUST00000028769 Stk32bQ9JJX8 414 aa18■□□□□ 0.47
Ptpra-201ENSMUST00000028769 Mpp6Q9JLB0 553 aa18■□□□□ 0.47
Ptpra-201ENSMUST00000028769 P01740 135 aa18■□□□□ 0.47
Ptpra-201ENSMUST00000028769 Pcsk1P63239 753 aa18■□□□□ 0.47
Ptpra-201ENSMUST00000028769 Pag1Q3U1F9 429 aa18■□□□□ 0.47
Ptpra-201ENSMUST00000028769 Cyp2c54Q6XVG2 490 aa18■□□□□ 0.47
Ptpra-201ENSMUST00000028769 Kirrel2Q7TSU7 700 aa18■□□□□ 0.47
Ptpra-201ENSMUST00000028769 Nacc1Q7TSZ8 514 aa18■□□□□ 0.47
Ptpra-201ENSMUST00000028769 Tecpr1Q80VP0 1166 aa18■□□□□ 0.47
Retrieved 100 of 22,080 RNA–protein pairs in 28.2 ms