Protein–RNA interactions for Protein: B1AY40

Ssxb8, MCG1044712, mousemouse

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssxb8B1AY40 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC33.6■■■□□ 2.97
Ssxb8B1AY40 Gm25239-201ENSMUST00000174915 86 ntBASIC33.46■■■□□ 2.95
Ssxb8B1AY40 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
Ssxb8B1AY40 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC32.39■■■□□ 2.78
Ssxb8B1AY40 Psd-208ENSMUST00000224556 2034 ntBASIC31.44■■■□□ 2.62
Ssxb8B1AY40 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
Ssxb8B1AY40 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
Ssxb8B1AY40 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC30.54■■■□□ 2.48
Ssxb8B1AY40 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
Ssxb8B1AY40 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
Ssxb8B1AY40 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
Ssxb8B1AY40 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
Ssxb8B1AY40 Gm15042-201ENSMUST00000120212 883 ntBASIC30.12■■■□□ 2.41
Ssxb8B1AY40 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
Ssxb8B1AY40 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
Ssxb8B1AY40 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
Ssxb8B1AY40 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC29.91■■■□□ 2.38
Ssxb8B1AY40 Gm15045-201ENSMUST00000117359 883 ntBASIC29.61■■■□□ 2.33
Ssxb8B1AY40 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
Ssxb8B1AY40 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC29.53■■■□□ 2.32
Ssxb8B1AY40 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC29.46■■■□□ 2.31
Ssxb8B1AY40 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
Ssxb8B1AY40 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC29.26■■■□□ 2.27
Ssxb8B1AY40 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC29.11■■■□□ 2.25
Ssxb8B1AY40 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC29.03■■■□□ 2.24
Ssxb8B1AY40 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
Ssxb8B1AY40 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
Ssxb8B1AY40 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC28.98■■■□□ 2.23
Ssxb8B1AY40 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC28.98■■■□□ 2.23
Ssxb8B1AY40 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
Ssxb8B1AY40 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC28.94■■■□□ 2.22
Ssxb8B1AY40 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
Ssxb8B1AY40 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
Ssxb8B1AY40 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC28.85■■■□□ 2.21
Ssxb8B1AY40 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC28.72■■■□□ 2.19
Ssxb8B1AY40 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC28.71■■■□□ 2.19
Ssxb8B1AY40 Gm24109-201ENSMUST00000175489 103 ntBASIC28.61■■■□□ 2.17
Ssxb8B1AY40 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Ssxb8B1AY40 Gm10524-201ENSMUST00000181931 1893 ntBASIC28.46■■■□□ 2.15
Ssxb8B1AY40 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Ssxb8B1AY40 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
Ssxb8B1AY40 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC28.33■■■□□ 2.12
Ssxb8B1AY40 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Ssxb8B1AY40 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC28.26■■■□□ 2.11
Ssxb8B1AY40 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC28.2■■■□□ 2.11
Ssxb8B1AY40 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC28.17■■■□□ 2.1
Ssxb8B1AY40 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Ssxb8B1AY40 Gm23366-201ENSMUST00000175022 89 ntBASIC28.06■■■□□ 2.08
Ssxb8B1AY40 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
Ssxb8B1AY40 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
Ssxb8B1AY40 Gm42596-201ENSMUST00000196305 1958 ntBASIC27.99■■■□□ 2.07
Ssxb8B1AY40 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
Ssxb8B1AY40 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC27.88■■■□□ 2.05
Ssxb8B1AY40 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
Ssxb8B1AY40 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
Ssxb8B1AY40 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC27.78■■■□□ 2.04
Ssxb8B1AY40 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Ssxb8B1AY40 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
Ssxb8B1AY40 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
Ssxb8B1AY40 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
Ssxb8B1AY40 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC27.7■■■□□ 2.02
Ssxb8B1AY40 AC153911.1-202ENSMUST00000218534 1034 ntBASIC27.68■■■□□ 2.02
Ssxb8B1AY40 CT025624.2-201ENSMUST00000223609 1909 ntBASIC27.67■■■□□ 2.02
Ssxb8B1AY40 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC27.6■■■□□ 2.01
Ssxb8B1AY40 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
Ssxb8B1AY40 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
Ssxb8B1AY40 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC27.56■■■□□ 2
Ssxb8B1AY40 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
Ssxb8B1AY40 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC27.44■■□□□ 1.98
Ssxb8B1AY40 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Ssxb8B1AY40 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC27.39■■□□□ 1.97
Ssxb8B1AY40 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Ssxb8B1AY40 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Ssxb8B1AY40 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC27.34■■□□□ 1.97
Ssxb8B1AY40 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC27.24■■□□□ 1.95
Ssxb8B1AY40 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC27.22■■□□□ 1.95
Ssxb8B1AY40 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Ssxb8B1AY40 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Ssxb8B1AY40 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC27.13■■□□□ 1.93
Ssxb8B1AY40 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Ssxb8B1AY40 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
Ssxb8B1AY40 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC26.97■■□□□ 1.91
Ssxb8B1AY40 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC26.96■■□□□ 1.91
Ssxb8B1AY40 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Ssxb8B1AY40 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Ssxb8B1AY40 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC26.82■■□□□ 1.88
Ssxb8B1AY40 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC26.82■■□□□ 1.88
Ssxb8B1AY40 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Ssxb8B1AY40 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Ssxb8B1AY40 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC26.78■■□□□ 1.88
Ssxb8B1AY40 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
Ssxb8B1AY40 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Ssxb8B1AY40 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Ssxb8B1AY40 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Ssxb8B1AY40 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Ssxb8B1AY40 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Ssxb8B1AY40 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Ssxb8B1AY40 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Ssxb8B1AY40 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
Ssxb8B1AY40 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC26.58■■□□□ 1.85
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms