Protein–RNA interactions for Protein: Q80TG9

Lrfn2, Leucine-rich repeat and fibronectin type-III domain-containing protein 2, mousemouse

Predictions only

Length 788 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrfn2Q80TG9 Gm25239-201ENSMUST00000174915 86 ntBASIC41,2■■■■■ 4,19
Lrfn2Q80TG9 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC38,03■■■■□ 3,68
Lrfn2Q80TG9 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC37,54■■■■□ 3,6
Lrfn2Q80TG9 Gm15042-201ENSMUST00000120212 883 ntBASIC36,11■■■■□ 3,37
Lrfn2Q80TG9 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC35,7■■■■□ 3,31
Lrfn2Q80TG9 Gm24109-201ENSMUST00000175489 103 ntBASIC35,69■■■■□ 3,3
Lrfn2Q80TG9 Gm15045-201ENSMUST00000117359 883 ntBASIC35,36■■■■□ 3,25
Lrfn2Q80TG9 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC35,1■■■■□ 3,21
Lrfn2Q80TG9 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC34,97■■■■□ 3,19
Lrfn2Q80TG9 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC34,81■■■■□ 3,16
Lrfn2Q80TG9 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC34,61■■■■□ 3,13
Lrfn2Q80TG9 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC34,53■■■■□ 3,12
Lrfn2Q80TG9 Gm23366-201ENSMUST00000175022 89 ntBASIC34,44■■■■□ 3,1
Lrfn2Q80TG9 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC34,26■■■■□ 3,08
Lrfn2Q80TG9 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC33,77■■■■□ 3
Lrfn2Q80TG9 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC33,72■■■□□ 2,99
Lrfn2Q80TG9 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC33,56■■■□□ 2,96
Lrfn2Q80TG9 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC33,41■■■□□ 2,94
Lrfn2Q80TG9 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC33,35■■■□□ 2,93
Lrfn2Q80TG9 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC33,28■■■□□ 2,92
Lrfn2Q80TG9 AC153911.1-202ENSMUST00000218534 1034 ntBASIC33,17■■■□□ 2,9
Lrfn2Q80TG9 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC33,13■■■□□ 2,89
Lrfn2Q80TG9 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC33,06■■■□□ 2,88
Lrfn2Q80TG9 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC33,02■■■□□ 2,88
Lrfn2Q80TG9 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC32,98■■■□□ 2,87
Lrfn2Q80TG9 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC32,96■■■□□ 2,87
Lrfn2Q80TG9 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC32,94■■■□□ 2,86
Lrfn2Q80TG9 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC32,91■■■□□ 2,86
Lrfn2Q80TG9 Psd-208ENSMUST00000224556 2034 ntBASIC32,89■■■□□ 2,86
Lrfn2Q80TG9 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC32,81■■■□□ 2,84
Lrfn2Q80TG9 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC32,69■■■□□ 2,82
Lrfn2Q80TG9 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC32,66■■■□□ 2,82
Lrfn2Q80TG9 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC32,64■■■□□ 2,82
Lrfn2Q80TG9 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC32,63■■■□□ 2,81
Lrfn2Q80TG9 Gm25238-201ENSMUST00000174914 89 ntBASIC32,49■■■□□ 2,79
Lrfn2Q80TG9 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC32,48■■■□□ 2,79
Lrfn2Q80TG9 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC32,3■■■□□ 2,76
Lrfn2Q80TG9 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC32,22■■■□□ 2,75
Lrfn2Q80TG9 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC32,08■■■□□ 2,73
Lrfn2Q80TG9 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC31,96■■■□□ 2,71
Lrfn2Q80TG9 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC31,95■■■□□ 2,71
Lrfn2Q80TG9 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC31,94■■■□□ 2,7
Lrfn2Q80TG9 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC31,89■■■□□ 2,7
Lrfn2Q80TG9 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC31,78■■■□□ 2,68
Lrfn2Q80TG9 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC31,73■■■□□ 2,67
Lrfn2Q80TG9 Gm27325-201ENSMUST00000175467 74 ntBASIC31,69■■■□□ 2,66
Lrfn2Q80TG9 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC31,67■■■□□ 2,66
Lrfn2Q80TG9 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC31,66■■■□□ 2,66
Lrfn2Q80TG9 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC31,59■■■□□ 2,65
Lrfn2Q80TG9 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC31,59■■■□□ 2,65
Lrfn2Q80TG9 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC31,52■■■□□ 2,64
Lrfn2Q80TG9 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC31,5■■■□□ 2,63
Lrfn2Q80TG9 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC31,4■■■□□ 2,62
Lrfn2Q80TG9 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC31,38■■■□□ 2,61
Lrfn2Q80TG9 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC31,35■■■□□ 2,61
Lrfn2Q80TG9 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC31,26■■■□□ 2,59
Lrfn2Q80TG9 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC31,19■■■□□ 2,58
Lrfn2Q80TG9 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC31,13■■■□□ 2,57
Lrfn2Q80TG9 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC31,12■■■□□ 2,57
Lrfn2Q80TG9 Gm25262-201ENSMUST00000174934 133 ntBASIC31,07■■■□□ 2,56
Lrfn2Q80TG9 Rab21-202ENSMUST00000218831 843 ntBASIC31,05■■■□□ 2,56
Lrfn2Q80TG9 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC31,05■■■□□ 2,56
Lrfn2Q80TG9 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC31,04■■■□□ 2,56
Lrfn2Q80TG9 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC31,02■■■□□ 2,56
Lrfn2Q80TG9 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC31,01■■■□□ 2,56
Lrfn2Q80TG9 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC30,93■■■□□ 2,54
Lrfn2Q80TG9 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC30,93■■■□□ 2,54
Lrfn2Q80TG9 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC30,88■■■□□ 2,53
Lrfn2Q80TG9 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC30,88■■■□□ 2,53
Lrfn2Q80TG9 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC30,85■■■□□ 2,53
Lrfn2Q80TG9 Gm10524-201ENSMUST00000181931 1893 ntBASIC30,83■■■□□ 2,53
Lrfn2Q80TG9 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC30,81■■■□□ 2,52
Lrfn2Q80TG9 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC30,75■■■□□ 2,51
Lrfn2Q80TG9 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC30,74■■■□□ 2,51
Lrfn2Q80TG9 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC30,72■■■□□ 2,51
Lrfn2Q80TG9 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC30,71■■■□□ 2,51
Lrfn2Q80TG9 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC30,71■■■□□ 2,51
Lrfn2Q80TG9 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC30,67■■■□□ 2,5
Lrfn2Q80TG9 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC30,65■■■□□ 2,5
Lrfn2Q80TG9 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC30,65■■■□□ 2,5
Lrfn2Q80TG9 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC30,59■■■□□ 2,49
Lrfn2Q80TG9 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC30,57■■■□□ 2,48
Lrfn2Q80TG9 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC30,54■■■□□ 2,48
Lrfn2Q80TG9 CT025624.2-201ENSMUST00000223609 1909 ntBASIC30,49■■■□□ 2,47
Lrfn2Q80TG9 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC30,47■■■□□ 2,47
Lrfn2Q80TG9 Gm42596-201ENSMUST00000196305 1958 ntBASIC30,45■■■□□ 2,47
Lrfn2Q80TG9 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC30,43■■■□□ 2,46
Lrfn2Q80TG9 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC30,42■■■□□ 2,46
Lrfn2Q80TG9 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC30,4■■■□□ 2,46
Lrfn2Q80TG9 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC30,38■■■□□ 2,45
Lrfn2Q80TG9 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC30,37■■■□□ 2,45
Lrfn2Q80TG9 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC30,31■■■□□ 2,44
Lrfn2Q80TG9 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC30,3■■■□□ 2,44
Lrfn2Q80TG9 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC30,29■■■□□ 2,44
Lrfn2Q80TG9 Gm26115-201ENSMUST00000175605 87 ntBASIC30,25■■■□□ 2,43
Lrfn2Q80TG9 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC30,25■■■□□ 2,43
Lrfn2Q80TG9 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC30,23■■■□□ 2,43
Lrfn2Q80TG9 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC30,19■■■□□ 2,42
Lrfn2Q80TG9 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC30,15■■■□□ 2,42
Lrfn2Q80TG9 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC30,15■■■□□ 2,42
Retrieved 100 of 76,532 protein–RNA pairs in 9,2 ms