RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Sntg2Q925E0 539 aa19■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Dhrs1Q99L04 313 aa19■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Efcab9Q9DAM2 216 aa19■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Abcb9Q9JJ59 762 aa19■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Vmn2r88L7N1W8 857 aa18.99■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Hrh2P97292 397 aa18.99■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Cntn4Q69Z26 1026 aa18.99■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 N4bp1Q6A037 893 aa18.99■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Ssx9Q6XAS3 170 aa18.99■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Tas2r115Q7M719 310 aa18.99■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Rnf168Q80XJ2 565 aa18.99■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Trerf1Q8BXJ2 1205 aa18.99■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Asb14Q8C6Y6 587 aa18.99■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Mark4Q8CIP4 752 aa18.99■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Snapc1Q8K0S9 389 aa18.99■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Gsg1Q8R1W2 324 aa18.99■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Gfm2Q8R2Q4 779 aa18.99■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Ssx2ipQ8VC66 615 aa18.99■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Lims2Q91XD2 341 aa18.99■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Zfp882E9Q4R4 555 aa18.99■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Cyp4f17G3UW78 524 aa18.99■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Tmigd3G3X8R9 209 aa18.99■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Pknox1O70477 436 aa18.99■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 LtfP08071 707 aa18.99■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 PgrQ00175 926 aa18.99■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 SelpQ01102 768 aa18.99■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Q32M26 199 aa18.99■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Gja6Q6S5G4 283 aa18.99■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Best2Q8BGM5 508 aa18.99■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Cabcoco1Q8CDT7 208 aa18.99■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 FktnQ8R507 461 aa18.99■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Hip1Q8VD75 1029 aaKnown RBP18.99■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 HnmtQ91VF2 295 aa18.99■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 SmtnQ921U8 923 aa18.99■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Lysmd3Q99LE3 305 aa18.99■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Rnf111Q99ML9 989 aa18.99■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Cyp4f16Q99N17 524 aa18.99■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Pih1d1Q9CQJ2 290 aa18.99■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 1700080O16RikQ9D9G4 284 aa18.99■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Dmap1Q9JI44 468 aa18.99■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Gm5160F8VPN3 147 aa18.98■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Zfp105G3X9I0 524 aa18.98■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Dnmt3bO88509 859 aa18.98■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 EgfP01132 1217 aa18.98■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Rpl36P47964 105 aaKnown RBP18.98■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 NxnP97346 435 aa18.98■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Arhgap17Q3UIA2 846 aa18.98■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Ip6k1Q6PD10 433 aa18.98■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Nacc1Q7TSZ8 514 aa18.98■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Pcid2Q8BFV2 399 aaKnown RBP18.98■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Nlrp4bQ8C6J9 863 aa18.98■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Spdye4bQ8CDE8 236 aa18.98■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Tbc1d19Q8VDV7 526 aa18.98■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Pcdh18Q8VHR0 1134 aa18.98■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 DenrQ9CQJ6 198 aaKnown RBP18.98■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Clic3Q9D7P7 237 aa18.98■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Timp4Q9JHB3 224 aa18.98■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Syt5Q9R0N5 386 aa18.98■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 PtprfA2A8L5 1898 aa18.98■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Trpm7Q923J1 1863 aa18.98■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Gm36028A0A0U1RPM1 299 aa18.98■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Wfdc16A2A5H4 111 aa18.98■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Skint1A7TZE6 364 aa18.98■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Znf683I7HJS4 458 aa18.98■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Cyp27b1O35084 507 aa18.98■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 CrymO54983 313 aa18.98■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Nploc4P60670 608 aa18.98■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Rab10P61027 200 aa18.98■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Adcy6Q01341 1165 aa18.98■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Klhl14Q69ZK5 630 aa18.98■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Ckap2lQ7TS74 745 aa18.98■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Snx9Q91VH2 595 aa18.98■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Elp3Q9CZX0 547 aa18.98■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Copg1Q9QZE5 874 aa18.98■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Gm14401A2ARV7 303 aa18.97■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Cyp2b13A6H6J2 491 aa18.97■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Vmn2r19G5E8G4 854 aa18.97■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 ZfaP23607 742 aa18.97■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Apobec1P51908 229 aaKnown RBP18.97■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Polr1bP70700 1135 aa18.97■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Gsdmc2Q2KHK6 480 aa18.97■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Hbq1bQ3U0A6 142 aa18.97■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 MroQ7TNB4 248 aa18.97■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Gsdmc3Q8CB12 480 aa18.97■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Cybrd1Q925G2 290 aa18.97■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Them5Q9CQJ0 248 aa18.97■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Zfp655Q9CZP3 541 aaKnown RBP18.97■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Q9D4A5 307 aa18.97■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Dnaja2Q9QYJ0 412 aa18.97■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Olfr292F8VQ84 308 aa18.97■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 P01668 110 aa18.97■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 PtprcP06800 1291 aa18.97■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 AladP10518 330 aa18.97■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 RapsnP12672 412 aa18.97■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 LynP25911 512 aa18.97■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Sipa1P46062 1037 aa18.97■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Ctps2P70303 586 aa18.97■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Arcn1Q5XJY5 511 aaKnown RBP18.97■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Mef2dQ63943 514 aa18.97■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Tas2r129Q7M709 320 aa18.97■□□□□ 0.63
Retrieved 100 of 22,080 RNA–protein pairs in 34.2 ms