Protein–RNA interactions for Protein: Q80XJ2

Rnf168, E3 ubiquitin-protein ligase RNF168, mousemouse

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf168Q80XJ2 Gm25239-201ENSMUST00000174915 86 ntBASIC40.86■■■■■ 4.13
Rnf168Q80XJ2 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC37.83■■■■□ 3.65
Rnf168Q80XJ2 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC37.32■■■■□ 3.56
Rnf168Q80XJ2 Gm15042-201ENSMUST00000120212 883 ntBASIC35.63■■■■□ 3.29
Rnf168Q80XJ2 Gm24109-201ENSMUST00000175489 103 ntBASIC35.44■■■■□ 3.26
Rnf168Q80XJ2 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC35.36■■■■□ 3.25
Rnf168Q80XJ2 Gm15045-201ENSMUST00000117359 883 ntBASIC34.79■■■■□ 3.16
Rnf168Q80XJ2 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC34.61■■■■□ 3.13
Rnf168Q80XJ2 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC34.58■■■■□ 3.13
Rnf168Q80XJ2 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC34.51■■■■□ 3.12
Rnf168Q80XJ2 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC34.4■■■■□ 3.1
Rnf168Q80XJ2 Gm23366-201ENSMUST00000175022 89 ntBASIC34.14■■■■□ 3.06
Rnf168Q80XJ2 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC34.12■■■■□ 3.05
Rnf168Q80XJ2 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC33.96■■■■□ 3.03
Rnf168Q80XJ2 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC33.28■■■□□ 2.92
Rnf168Q80XJ2 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC33.23■■■□□ 2.91
Rnf168Q80XJ2 AC153911.1-202ENSMUST00000218534 1034 ntBASIC33.08■■■□□ 2.89
Rnf168Q80XJ2 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC32.91■■■□□ 2.86
Rnf168Q80XJ2 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC32.91■■■□□ 2.86
Rnf168Q80XJ2 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC32.83■■■□□ 2.85
Rnf168Q80XJ2 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC32.78■■■□□ 2.84
Rnf168Q80XJ2 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC32.71■■■□□ 2.83
Rnf168Q80XJ2 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
Rnf168Q80XJ2 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
Rnf168Q80XJ2 Psd-208ENSMUST00000224556 2034 ntBASIC32.6■■■□□ 2.81
Rnf168Q80XJ2 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC32.47■■■□□ 2.79
Rnf168Q80XJ2 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC32.44■■■□□ 2.78
Rnf168Q80XJ2 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC32.42■■■□□ 2.78
Rnf168Q80XJ2 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
Rnf168Q80XJ2 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
Rnf168Q80XJ2 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
Rnf168Q80XJ2 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC32.32■■■□□ 2.76
Rnf168Q80XJ2 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
Rnf168Q80XJ2 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
Rnf168Q80XJ2 Gm25238-201ENSMUST00000174914 89 ntBASIC32.27■■■□□ 2.76
Rnf168Q80XJ2 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC32.11■■■□□ 2.73
Rnf168Q80XJ2 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC32.06■■■□□ 2.72
Rnf168Q80XJ2 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC31.71■■■□□ 2.67
Rnf168Q80XJ2 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC31.6■■■□□ 2.65
Rnf168Q80XJ2 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
Rnf168Q80XJ2 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.65
Rnf168Q80XJ2 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC31.48■■■□□ 2.63
Rnf168Q80XJ2 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
Rnf168Q80XJ2 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC31.45■■■□□ 2.63
Rnf168Q80XJ2 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Rnf168Q80XJ2 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC31.32■■■□□ 2.6
Rnf168Q80XJ2 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
Rnf168Q80XJ2 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC31.31■■■□□ 2.6
Rnf168Q80XJ2 Gm27325-201ENSMUST00000175467 74 ntBASIC31.19■■■□□ 2.58
Rnf168Q80XJ2 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC31.08■■■□□ 2.57
Rnf168Q80XJ2 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC31.06■■■□□ 2.56
Rnf168Q80XJ2 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
Rnf168Q80XJ2 Gm25262-201ENSMUST00000174934 133 ntBASIC31.01■■■□□ 2.55
Rnf168Q80XJ2 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC30.96■■■□□ 2.55
Rnf168Q80XJ2 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
Rnf168Q80XJ2 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC30.89■■■□□ 2.53
Rnf168Q80XJ2 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
Rnf168Q80XJ2 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
Rnf168Q80XJ2 Rab21-202ENSMUST00000218831 843 ntBASIC30.72■■■□□ 2.51
Rnf168Q80XJ2 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
Rnf168Q80XJ2 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
Rnf168Q80XJ2 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC30.64■■■□□ 2.5
Rnf168Q80XJ2 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC30.64■■■□□ 2.5
Rnf168Q80XJ2 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
Rnf168Q80XJ2 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
Rnf168Q80XJ2 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC30.56■■■□□ 2.48
Rnf168Q80XJ2 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
Rnf168Q80XJ2 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
Rnf168Q80XJ2 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC30.44■■■□□ 2.46
Rnf168Q80XJ2 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC30.42■■■□□ 2.46
Rnf168Q80XJ2 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC30.36■■■□□ 2.45
Rnf168Q80XJ2 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
Rnf168Q80XJ2 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC30.34■■■□□ 2.45
Rnf168Q80XJ2 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
Rnf168Q80XJ2 Gm10524-201ENSMUST00000181931 1893 ntBASIC30.31■■■□□ 2.44
Rnf168Q80XJ2 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
Rnf168Q80XJ2 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC30.28■■■□□ 2.44
Rnf168Q80XJ2 Gm26115-201ENSMUST00000175605 87 ntBASIC30.27■■■□□ 2.44
Rnf168Q80XJ2 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Rnf168Q80XJ2 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Rnf168Q80XJ2 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC30.24■■■□□ 2.43
Rnf168Q80XJ2 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC30.24■■■□□ 2.43
Rnf168Q80XJ2 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC30.22■■■□□ 2.43
Rnf168Q80XJ2 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC30.17■■■□□ 2.42
Rnf168Q80XJ2 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
Rnf168Q80XJ2 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
Rnf168Q80XJ2 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
Rnf168Q80XJ2 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC30.13■■■□□ 2.41
Rnf168Q80XJ2 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
Rnf168Q80XJ2 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC30.08■■■□□ 2.41
Rnf168Q80XJ2 Gm8109-201ENSMUST00000194076 746 ntBASIC30.07■■■□□ 2.4
Rnf168Q80XJ2 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
Rnf168Q80XJ2 CT025624.2-201ENSMUST00000223609 1909 ntBASIC29.99■■■□□ 2.39
Rnf168Q80XJ2 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC29.97■■■□□ 2.39
Rnf168Q80XJ2 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC29.97■■■□□ 2.39
Rnf168Q80XJ2 Gm42596-201ENSMUST00000196305 1958 ntBASIC29.95■■■□□ 2.39
Rnf168Q80XJ2 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
Rnf168Q80XJ2 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC29.91■■■□□ 2.38
Rnf168Q80XJ2 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC29.9■■■□□ 2.38
Rnf168Q80XJ2 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC29.85■■■□□ 2.37
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms