Protein–RNA interactions for Protein: Q8CDT7

Cabcoco1, Ciliary-associated calcium-binding coiled-coil protein 1, mousemouse

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cabcoco1Q8CDT7 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC33,74■■■□□ 2,99
Cabcoco1Q8CDT7 Gm25239-201ENSMUST00000174915 86 ntBASIC33,11■■■□□ 2,89
Cabcoco1Q8CDT7 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC32,54■■■□□ 2,8
Cabcoco1Q8CDT7 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC32,52■■■□□ 2,8
Cabcoco1Q8CDT7 Psd-208ENSMUST00000224556 2034 ntBASIC31,59■■■□□ 2,65
Cabcoco1Q8CDT7 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC31,19■■■□□ 2,58
Cabcoco1Q8CDT7 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC30,93■■■□□ 2,54
Cabcoco1Q8CDT7 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC30,74■■■□□ 2,51
Cabcoco1Q8CDT7 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC30,66■■■□□ 2,5
Cabcoco1Q8CDT7 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC30,27■■■□□ 2,44
Cabcoco1Q8CDT7 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC30,27■■■□□ 2,44
Cabcoco1Q8CDT7 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC30,17■■■□□ 2,42
Cabcoco1Q8CDT7 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC30,14■■■□□ 2,42
Cabcoco1Q8CDT7 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC30,13■■■□□ 2,41
Cabcoco1Q8CDT7 Gm15042-201ENSMUST00000120212 883 ntBASIC29,92■■■□□ 2,38
Cabcoco1Q8CDT7 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC29,9■■■□□ 2,38
Cabcoco1Q8CDT7 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC29,89■■■□□ 2,38
Cabcoco1Q8CDT7 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC29,7■■■□□ 2,35
Cabcoco1Q8CDT7 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC29,67■■■□□ 2,34
Cabcoco1Q8CDT7 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC29,57■■■□□ 2,32
Cabcoco1Q8CDT7 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC29,53■■■□□ 2,32
Cabcoco1Q8CDT7 Gm15045-201ENSMUST00000117359 883 ntBASIC29,38■■■□□ 2,29
Cabcoco1Q8CDT7 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC29,37■■■□□ 2,29
Cabcoco1Q8CDT7 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC29,21■■■□□ 2,27
Cabcoco1Q8CDT7 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC29,21■■■□□ 2,27
Cabcoco1Q8CDT7 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC29,15■■■□□ 2,26
Cabcoco1Q8CDT7 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC29,03■■■□□ 2,24
Cabcoco1Q8CDT7 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC29,01■■■□□ 2,24
Cabcoco1Q8CDT7 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC28,93■■■□□ 2,22
Cabcoco1Q8CDT7 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC28,93■■■□□ 2,22
Cabcoco1Q8CDT7 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC28,92■■■□□ 2,22
Cabcoco1Q8CDT7 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC28,88■■■□□ 2,21
Cabcoco1Q8CDT7 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC28,87■■■□□ 2,21
Cabcoco1Q8CDT7 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC28,85■■■□□ 2,21
Cabcoco1Q8CDT7 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC28,71■■■□□ 2,19
Cabcoco1Q8CDT7 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC28,66■■■□□ 2,18
Cabcoco1Q8CDT7 Gm10524-201ENSMUST00000181931 1893 ntBASIC28,6■■■□□ 2,17
Cabcoco1Q8CDT7 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC28,52■■■□□ 2,16
Cabcoco1Q8CDT7 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC28,51■■■□□ 2,15
Cabcoco1Q8CDT7 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC28,49■■■□□ 2,15
Cabcoco1Q8CDT7 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC28,45■■■□□ 2,14
Cabcoco1Q8CDT7 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC28,41■■■□□ 2,14
Cabcoco1Q8CDT7 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC28,38■■■□□ 2,13
Cabcoco1Q8CDT7 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC28,29■■■□□ 2,12
Cabcoco1Q8CDT7 Gm42596-201ENSMUST00000196305 1958 ntBASIC28,24■■■□□ 2,11
Cabcoco1Q8CDT7 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC28,23■■■□□ 2,11
Cabcoco1Q8CDT7 Gm24109-201ENSMUST00000175489 103 ntBASIC28,2■■■□□ 2,1
Cabcoco1Q8CDT7 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC28,12■■■□□ 2,09
Cabcoco1Q8CDT7 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC28,06■■■□□ 2,08
Cabcoco1Q8CDT7 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC28,03■■■□□ 2,08
Cabcoco1Q8CDT7 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC27,99■■■□□ 2,07
Cabcoco1Q8CDT7 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC27,93■■■□□ 2,06
Cabcoco1Q8CDT7 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC27,89■■■□□ 2,05
Cabcoco1Q8CDT7 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC27,88■■■□□ 2,05
Cabcoco1Q8CDT7 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC27,85■■■□□ 2,05
Cabcoco1Q8CDT7 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC27,85■■■□□ 2,05
Cabcoco1Q8CDT7 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC27,84■■■□□ 2,05
Cabcoco1Q8CDT7 Gm23366-201ENSMUST00000175022 89 ntBASIC27,82■■■□□ 2,04
Cabcoco1Q8CDT7 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC27,82■■■□□ 2,04
Cabcoco1Q8CDT7 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC27,78■■■□□ 2,04
Cabcoco1Q8CDT7 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC27,74■■■□□ 2,03
Cabcoco1Q8CDT7 CT025624.2-201ENSMUST00000223609 1909 ntBASIC27,72■■■□□ 2,03
Cabcoco1Q8CDT7 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC27,71■■■□□ 2,03
Cabcoco1Q8CDT7 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC27,65■■■□□ 2,02
Cabcoco1Q8CDT7 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC27,64■■■□□ 2,02
Cabcoco1Q8CDT7 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC27,63■■■□□ 2,01
Cabcoco1Q8CDT7 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC27,59■■■□□ 2,01
Cabcoco1Q8CDT7 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC27,57■■■□□ 2
Cabcoco1Q8CDT7 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC27,56■■■□□ 2
Cabcoco1Q8CDT7 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC27,52■■■□□ 2
Cabcoco1Q8CDT7 AC153911.1-202ENSMUST00000218534 1034 ntBASIC27,52■■■□□ 2
Cabcoco1Q8CDT7 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC27,49■■□□□ 1,99
Cabcoco1Q8CDT7 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC27,47■■□□□ 1,99
Cabcoco1Q8CDT7 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC27,46■■□□□ 1,99
Cabcoco1Q8CDT7 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC27,45■■□□□ 1,99
Cabcoco1Q8CDT7 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC27,44■■□□□ 1,98
Cabcoco1Q8CDT7 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC27,41■■□□□ 1,98
Cabcoco1Q8CDT7 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC27,35■■□□□ 1,97
Cabcoco1Q8CDT7 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC27,31■■□□□ 1,96
Cabcoco1Q8CDT7 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC27,29■■□□□ 1,96
Cabcoco1Q8CDT7 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC27,24■■□□□ 1,95
Cabcoco1Q8CDT7 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC27,23■■□□□ 1,95
Cabcoco1Q8CDT7 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC27,19■■□□□ 1,94
Cabcoco1Q8CDT7 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC27,18■■□□□ 1,94
Cabcoco1Q8CDT7 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC27,11■■□□□ 1,93
Cabcoco1Q8CDT7 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC27,08■■□□□ 1,93
Cabcoco1Q8CDT7 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC27,02■■□□□ 1,92
Cabcoco1Q8CDT7 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC26,98■■□□□ 1,91
Cabcoco1Q8CDT7 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC26,95■■□□□ 1,91
Cabcoco1Q8CDT7 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC26,94■■□□□ 1,9
Cabcoco1Q8CDT7 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC26,88■■□□□ 1,89
Cabcoco1Q8CDT7 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC26,88■■□□□ 1,89
Cabcoco1Q8CDT7 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC26,85■■□□□ 1,89
Cabcoco1Q8CDT7 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC26,82■■□□□ 1,88
Cabcoco1Q8CDT7 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC26,81■■□□□ 1,88
Cabcoco1Q8CDT7 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC26,79■■□□□ 1,88
Cabcoco1Q8CDT7 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC26,75■■□□□ 1,87
Cabcoco1Q8CDT7 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC26,73■■□□□ 1,87
Cabcoco1Q8CDT7 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC26,73■■□□□ 1,87
Cabcoco1Q8CDT7 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC26,71■■□□□ 1,87
Retrieved 100 of 76,532 protein–RNA pairs in 11,3 ms