RNA–Protein interactions for RNA: ENST00000314915.6

BDNF-201, Transcript of brain derived neurotrophic factor, humanhuman

TSL 1 (best) BASIC

Gene BDNF, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-201ENST00000314915 ERBB2P04626 1255 aa9.48□□□□□ -0.89
BDNF-201ENST00000314915 PROS1P07225 676 aa9.48□□□□□ -0.89
BDNF-201ENST00000314915 NR3C2P08235 984 aa9.48□□□□□ -0.89
BDNF-201ENST00000314915 HOXA6P31267 233 aa9.48□□□□□ -0.89
BDNF-201ENST00000314915 SSPNQ14714 243 aa9.48□□□□□ -0.89
BDNF-201ENST00000314915 RAB39AQ14964 217 aa9.48□□□□□ -0.89
BDNF-201ENST00000314915 MORF4L2Q15014 288 aa9.48□□□□□ -0.89
BDNF-201ENST00000314915 SHQ1Q6PI26 577 aaKnown RBP9.48□□□□□ -0.89
BDNF-201ENST00000314915 RASGRP3Q8IV61 690 aa9.48□□□□□ -0.89
BDNF-201ENST00000314915 C4orf33Q8N1A6 199 aa9.48□□□□□ -0.89
BDNF-201ENST00000314915 PARP8Q8N3A8 854 aa9.48□□□□□ -0.89
BDNF-201ENST00000314915 CCDC185Q8N715 623 aa9.48□□□□□ -0.89
BDNF-201ENST00000314915 LRRC57Q8N9N7 239 aa9.48□□□□□ -0.89
BDNF-201ENST00000314915 OR52K2Q8NGK3 314 aa9.48□□□□□ -0.89
BDNF-201ENST00000314915 YIPF5Q969M3 257 aa9.48□□□□□ -0.89
BDNF-201ENST00000314915 KIFC3Q9BVG8 833 aa9.48□□□□□ -0.89
BDNF-201ENST00000314915 ZNF416Q9BWM5 594 aa9.48□□□□□ -0.89
BDNF-201ENST00000314915 DBNDD1Q9H9R9 158 aa9.48□□□□□ -0.89
BDNF-201ENST00000314915 SSU72Q9NP77 194 aaKnown RBP9.48□□□□□ -0.89
BDNF-201ENST00000314915 GJB4Q9NTQ9 266 aa9.48□□□□□ -0.89
BDNF-201ENST00000314915 PCYOX1Q9UHG3 505 aa9.48□□□□□ -0.89
BDNF-201ENST00000314915 POMPQ9Y244 141 aa9.48□□□□□ -0.89
BDNF-201ENST00000314915 SF3B1O75533 1304 aaKnown RBP eCLIP9.48□□□□□ -0.89
BDNF-201ENST00000314915 CTDSP2O14595 271 aa9.47□□□□□ -0.89
BDNF-201ENST00000314915 CYP11B1P15538 503 aa9.47□□□□□ -0.89
BDNF-201ENST00000314915 DDCP20711 480 aa9.47□□□□□ -0.89
BDNF-201ENST00000314915 CCND2P30279 289 aa9.47□□□□□ -0.89
BDNF-201ENST00000314915 CHRNA5P30532 468 aa9.47□□□□□ -0.89
BDNF-201ENST00000314915 PCP4P48539 62 aa9.47□□□□□ -0.89
BDNF-201ENST00000314915 POU3F4P49335 361 aa9.47□□□□□ -0.89
BDNF-201ENST00000314915 EPHB1P54762 984 aa9.47□□□□□ -0.89
BDNF-201ENST00000314915 NME3Q13232 169 aa9.47□□□□□ -0.89
BDNF-201ENST00000314915 RIN1Q13671 783 aa9.47□□□□□ -0.89
BDNF-201ENST00000314915 FIBCD1Q8N539 461 aa9.47□□□□□ -0.89
BDNF-201ENST00000314915 KBTBD3Q8NAB2 608 aa9.47□□□□□ -0.89
BDNF-201ENST00000314915 OR8K5Q8NH50 307 aa9.47□□□□□ -0.89
BDNF-201ENST00000314915 ZDHHC12Q96GR4 267 aa9.47□□□□□ -0.89
BDNF-201ENST00000314915 CNOT6LQ96LI5 555 aaKnown RBP9.47□□□□□ -0.89
BDNF-201ENST00000314915 KLHL32Q96NJ5 620 aa9.47□□□□□ -0.89
BDNF-201ENST00000314915 PPCSQ9HAB8 311 aa9.47□□□□□ -0.89
BDNF-201ENST00000314915 PPARGC1AQ9UBK2 798 aaKnown RBP9.47□□□□□ -0.89
BDNF-201ENST00000314915 ENTPD4Q9Y227 616 aa9.47□□□□□ -0.89
BDNF-201ENST00000314915 MAP3K2Q9Y2U5 619 aa9.47□□□□□ -0.89
BDNF-201ENST00000314915 VWDEQ8N2E2 1590 aa9.47□□□□□ -0.89
BDNF-201ENST00000314915 A0A0X1KG70 313 aa9.47□□□□□ -0.89
BDNF-201ENST00000314915 TMX2-CTNND1H3BSU7 103 aa9.47□□□□□ -0.89
BDNF-201ENST00000314915 RIMBP2O15034 1052 aa9.47□□□□□ -0.89
BDNF-201ENST00000314915 ARIH2O95376 493 aa9.47□□□□□ -0.89
BDNF-201ENST00000314915 IL1BP01584 269 aa9.47□□□□□ -0.89
BDNF-201ENST00000314915 APOA4P06727 396 aa9.47□□□□□ -0.89
BDNF-201ENST00000314915 ATP5OP48047 213 aa9.47□□□□□ -0.89
BDNF-201ENST00000314915 DGKQP52824 942 aa9.47□□□□□ -0.89
BDNF-201ENST00000314915 ARL4CP56559 192 aa9.47□□□□□ -0.89
BDNF-201ENST00000314915 CAV1Q03135 178 aa9.47□□□□□ -0.89
BDNF-201ENST00000314915 TMED2Q15363 201 aa9.47□□□□□ -0.89
BDNF-201ENST00000314915 LDLRAD1Q5T700 205 aa9.47□□□□□ -0.89
BDNF-201ENST00000314915 AADACL4Q5VUY2 407 aa9.47□□□□□ -0.89
BDNF-201ENST00000314915 TDRPQ86YL5 185 aa9.47□□□□□ -0.89
BDNF-201ENST00000314915 OR4D10Q8NGI6 311 aa9.47□□□□□ -0.89
BDNF-201ENST00000314915 UFD1Q92890 307 aa9.47□□□□□ -0.89
BDNF-201ENST00000314915 RAB7BQ96AH8 199 aa9.47□□□□□ -0.89
BDNF-201ENST00000314915 NELL2Q99435 816 aa9.47□□□□□ -0.89
BDNF-201ENST00000314915 MANSC1Q9H8J5 431 aa9.47□□□□□ -0.89
BDNF-201ENST00000314915 KCNH7Q9NS40 1196 aa9.47□□□□□ -0.89
BDNF-201ENST00000314915 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.47□□□□□ -0.89
BDNF-201ENST00000314915 CNTN3Q9P232 1028 aa9.47□□□□□ -0.89
BDNF-201ENST00000314915 PGAP2Q9UHJ9 254 aa9.47□□□□□ -0.89
BDNF-201ENST00000314915 PRKAB1Q9Y478 270 aa9.47□□□□□ -0.89
BDNF-201ENST00000314915 DAGLAQ9Y4D2 1042 aa9.47□□□□□ -0.89
BDNF-201ENST00000314915 PCDHGA2Q9Y5H1 932 aa9.47□□□□□ -0.89
BDNF-201ENST00000314915 MYO3AQ8NEV4 1616 aa9.47□□□□□ -0.89
BDNF-201ENST00000314915 ATP8B3O60423 1300 aa9.47□□□□□ -0.89
BDNF-201ENST00000314915 ARGFXA6NJG6 315 aa9.47□□□□□ -0.89
BDNF-201ENST00000314915 INMTO95050 263 aa9.47□□□□□ -0.89
BDNF-201ENST00000314915 IL6P05231 212 aa9.47□□□□□ -0.89
BDNF-201ENST00000314915 MYL2P10916 166 aa9.47□□□□□ -0.89
BDNF-201ENST00000314915 BMP1P13497 986 aa9.47□□□□□ -0.89
BDNF-201ENST00000314915 ITGB6P18564 788 aa9.47□□□□□ -0.89
BDNF-201ENST00000314915 CASP2P42575 452 aa9.47□□□□□ -0.89
BDNF-201ENST00000314915 CLCN4P51793 760 aa9.47□□□□□ -0.89
BDNF-201ENST00000314915 JAM2P57087 298 aa9.47□□□□□ -0.89
BDNF-201ENST00000314915 HAND2P61296 217 aa9.47□□□□□ -0.89
BDNF-201ENST00000314915 CDKL1Q00532 357 aa9.47□□□□□ -0.89
BDNF-201ENST00000314915 IL1RL1Q01638 556 aa9.47□□□□□ -0.89
BDNF-201ENST00000314915 MMRN1Q13201 1228 aa9.47□□□□□ -0.89
BDNF-201ENST00000314915 TTC33Q6PID6 262 aaPredicted RBP9.47□□□□□ -0.89
BDNF-201ENST00000314915 POMZP3Q6PJE2 187 aa9.47□□□□□ -0.89
BDNF-201ENST00000314915 AMIGO1Q86WK6 493 aa9.47□□□□□ -0.89
BDNF-201ENST00000314915 SEPT12Q8IYM1 358 aa9.47□□□□□ -0.89
BDNF-201ENST00000314915 DAGLBQ8NCG7 672 aa9.47□□□□□ -0.89
BDNF-201ENST00000314915 WDR48Q8TAF3 677 aa9.47□□□□□ -0.89
BDNF-201ENST00000314915 PNPT1Q8TCS8 783 aaKnown RBP9.47□□□□□ -0.89
BDNF-201ENST00000314915 RASGRP4Q8TDF6 673 aa9.47□□□□□ -0.89
BDNF-201ENST00000314915 HTRA1Q92743 480 aa9.47□□□□□ -0.89
BDNF-201ENST00000314915 C8orf37Q96NL8 207 aa9.47□□□□□ -0.89
BDNF-201ENST00000314915 BCL2L14Q9BZR8 327 aa9.47□□□□□ -0.89
BDNF-201ENST00000314915 TBC1D22BQ9NU19 505 aa9.47□□□□□ -0.89
BDNF-201ENST00000314915 SMOXQ9NWM0 555 aa9.47□□□□□ -0.89
BDNF-201ENST00000314915 ING3Q9NXR8 418 aa9.47□□□□□ -0.89
BDNF-201ENST00000314915 COQ3Q9NZJ6 369 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms