RNA–Protein interactions for RNA: ENST00000408378.1

MIR548I3-201, Transcript of microRNA 548i-3, humanhuman

BASIC

Gene MIR548I3, Length 149 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR548I3-201ENST00000408378 ZBTB16Q05516 673 aa1.68□□□□□ -2.14
MIR548I3-201ENST00000408378 KCNAB1Q14722 419 aa1.68□□□□□ -2.14
MIR548I3-201ENST00000408378 ODF1Q14990 250 aa1.68□□□□□ -2.14
MIR548I3-201ENST00000408378 ZNF774Q6NX45 483 aa1.68□□□□□ -2.14
MIR548I3-201ENST00000408378 ZNF343Q6P1L6 599 aa1.68□□□□□ -2.14
MIR548I3-201ENST00000408378 DDX42Q86XP3 938 aaKnown RBP eCLIP1.68□□□□□ -2.14
MIR548I3-201ENST00000408378 PGBD5Q8N414 524 aa1.68□□□□□ -2.14
MIR548I3-201ENST00000408378 PLBD2Q8NHP8 589 aa1.68□□□□□ -2.14
MIR548I3-201ENST00000408378 LGALS12Q96DT0 336 aa1.68□□□□□ -2.14
MIR548I3-201ENST00000408378 CDK5RAP3Q96JB5 506 aa1.68□□□□□ -2.14
MIR548I3-201ENST00000408378 PRDM16Q9HAZ2 1276 aa1.68□□□□□ -2.14
MIR548I3-201ENST00000408378 FBRSL1Q9HCM7 1045 aaKnown RBP1.68□□□□□ -2.14
MIR548I3-201ENST00000408378 TAAR2Q9P1P5 351 aa1.68□□□□□ -2.14
MIR548I3-201ENST00000408378 COL20A1Q9P218 1284 aa1.68□□□□□ -2.14
MIR548I3-201ENST00000408378 IGHV4-28A0A0C4DH34 117 aa1.67□□□□□ -2.14
MIR548I3-201ENST00000408378 PMS2P5A8MQ11 134 aa1.67□□□□□ -2.14
MIR548I3-201ENST00000408378 ENPP3O14638 875 aa1.67□□□□□ -2.14
MIR548I3-201ENST00000408378 MSI1O43347 362 aaKnown RBP1.67□□□□□ -2.14
MIR548I3-201ENST00000408378 ITM2AO43736 263 aa1.67□□□□□ -2.14
MIR548I3-201ENST00000408378 DUX4L4P0CJ87 422 aa1.67□□□□□ -2.14
MIR548I3-201ENST00000408378 TSHRP16473 764 aa1.67□□□□□ -2.14
MIR548I3-201ENST00000408378 MATN1P21941 496 aa1.67□□□□□ -2.14
MIR548I3-201ENST00000408378 SLC16A2P36021 539 aa1.67□□□□□ -2.14
MIR548I3-201ENST00000408378 AVPR1AP37288 418 aa1.67□□□□□ -2.14
MIR548I3-201ENST00000408378 DGKQP52824 942 aa1.67□□□□□ -2.14
MIR548I3-201ENST00000408378 ARHGEF7Q14155 803 aa1.67□□□□□ -2.14
MIR548I3-201ENST00000408378 PGS1Q32NB8 556 aa1.67□□□□□ -2.14
MIR548I3-201ENST00000408378 TMEM71Q6P5X7 295 aa1.67□□□□□ -2.14
MIR548I3-201ENST00000408378 USP45Q70EL2 814 aa1.67□□□□□ -2.14
MIR548I3-201ENST00000408378 CATIPQ7Z7H3 387 aa1.67□□□□□ -2.14
MIR548I3-201ENST00000408378 CMASQ8NFW8 434 aaPredicted RBP1.67□□□□□ -2.14
MIR548I3-201ENST00000408378 ZNF668Q96K58 619 aaPredicted RBP1.67□□□□□ -2.14
MIR548I3-201ENST00000408378 VGLL1Q99990 258 aa1.67□□□□□ -2.14
MIR548I3-201ENST00000408378 FSD1Q9BTV5 496 aa1.67□□□□□ -2.14
MIR548I3-201ENST00000408378 STK31Q9BXU1 1019 aa1.67□□□□□ -2.14
MIR548I3-201ENST00000408378 IL21RQ9HBE5 538 aa1.67□□□□□ -2.14
MIR548I3-201ENST00000408378 OGFRQ9NZT2 677 aa1.67□□□□□ -2.14
MIR548I3-201ENST00000408378 CAMSAP3Q9P1Y5 1249 aaPredicted RBP1.67□□□□□ -2.14
MIR548I3-201ENST00000408378 ZNF711Q9Y462 761 aa1.67□□□□□ -2.14
MIR548I3-201ENST00000408378 HMCN1Q96RW7 5635 aa1.67□□□□□ -2.14
MIR548I3-201ENST00000408378 GATA1P15976 413 aaPredicted RBP1.66□□□□□ -2.14
MIR548I3-201ENST00000408378 NPR1P16066 1061 aa1.66□□□□□ -2.14
MIR548I3-201ENST00000408378 RXRAP19793 462 aa1.66□□□□□ -2.14
MIR548I3-201ENST00000408378 CEACAM8P31997 349 aaPredicted RBP1.66□□□□□ -2.14
MIR548I3-201ENST00000408378 HLCSP50747 726 aa1.66□□□□□ -2.14
MIR548I3-201ENST00000408378 TBX2Q13207 712 aaPredicted RBP1.66□□□□□ -2.14
MIR548I3-201ENST00000408378 TAF7LQ5H9L4 462 aa1.66□□□□□ -2.14
MIR548I3-201ENST00000408378 TYW3Q6IPR3 259 aaKnown RBP1.66□□□□□ -2.14
MIR548I3-201ENST00000408378 FAM198BQ6UWH4 519 aa1.66□□□□□ -2.14
MIR548I3-201ENST00000408378 KRTAP11-1Q8IUC1 163 aa1.66□□□□□ -2.14
MIR548I3-201ENST00000408378 PRR18Q8N4B5 295 aa1.66□□□□□ -2.14
MIR548I3-201ENST00000408378 ZNF441Q8N8Z8 693 aa1.66□□□□□ -2.14
MIR548I3-201ENST00000408378 CNBD1Q8NA66 436 aa1.66□□□□□ -2.14
MIR548I3-201ENST00000408378 ATL2Q8NHH9 583 aa1.66□□□□□ -2.14
MIR548I3-201ENST00000408378 DRC1Q96MC2 740 aa1.66□□□□□ -2.14
MIR548I3-201ENST00000408378 SMURF2Q9HAU4 748 aa1.66□□□□□ -2.14
MIR548I3-201ENST00000408378 ZNF304Q9HCX3 659 aa1.66□□□□□ -2.14
MIR548I3-201ENST00000408378 VPS51Q9UID3 782 aa1.66□□□□□ -2.14
MIR548I3-201ENST00000408378 B3GNT3Q9Y2A9 372 aa1.66□□□□□ -2.14
MIR548I3-201ENST00000408378 SRPRBQ9Y5M8 271 aaKnown RBP1.66□□□□□ -2.14
MIR548I3-201ENST00000408378 COL5A2P05997 1499 aaPredicted RBP1.66□□□□□ -2.14
MIR548I3-201ENST00000408378 ZNF646O15015 1829 aaPredicted RBP1.66□□□□□ -2.14
MIR548I3-201ENST00000408378 SOX30O94993 753 aa1.65□□□□□ -2.15
MIR548I3-201ENST00000408378 ZRANB2O95218 330 aaKnown RBP eCLIP1.65□□□□□ -2.15
MIR548I3-201ENST00000408378 KITP10721 976 aa1.65□□□□□ -2.15
MIR548I3-201ENST00000408378 GNLYP22749 145 aa1.65□□□□□ -2.15
MIR548I3-201ENST00000408378 ARFIP2P53365 341 aa1.65□□□□□ -2.15
MIR548I3-201ENST00000408378 SLC8A3P57103 927 aa1.65□□□□□ -2.15
MIR548I3-201ENST00000408378 TRA2BP62995 288 aaKnown RBP1.65□□□□□ -2.15
MIR548I3-201ENST00000408378 Q6ZVH6 145 aa1.65□□□□□ -2.15
MIR548I3-201ENST00000408378 SLC9B2Q86UD5 537 aa1.65□□□□□ -2.15
MIR548I3-201ENST00000408378 CCDC25Q86WR0 208 aa1.65□□□□□ -2.15
MIR548I3-201ENST00000408378 LAS2Q8IYD9 372 aa1.65□□□□□ -2.15
MIR548I3-201ENST00000408378 ZNF440Q8IYI8 595 aa1.65□□□□□ -2.15
MIR548I3-201ENST00000408378 DMBX1Q8NFW5 382 aa1.65□□□□□ -2.15
MIR548I3-201ENST00000408378 KBTBD7Q8WVZ9 684 aa1.65□□□□□ -2.15
MIR548I3-201ENST00000408378 IP6K1Q92551 441 aa1.65□□□□□ -2.15
MIR548I3-201ENST00000408378 A1CFQ9NQ94 594 aaKnown RBP1.65□□□□□ -2.15
MIR548I3-201ENST00000408378 RNF146Q9NTX7 359 aa1.65□□□□□ -2.15
MIR548I3-201ENST00000408378 CNTN5O94779 1100 aa1.64□□□□□ -2.15
MIR548I3-201ENST00000408378 ALADP13716 330 aa1.64□□□□□ -2.15
MIR548I3-201ENST00000408378 TPH1P17752 444 aa1.64□□□□□ -2.15
MIR548I3-201ENST00000408378 CNGA1P29973 690 aa1.64□□□□□ -2.15
MIR548I3-201ENST00000408378 MXI1P50539 228 aa1.64□□□□□ -2.15
MIR548I3-201ENST00000408378 ZBTB17Q13105 803 aa1.64□□□□□ -2.15
MIR548I3-201ENST00000408378 PEX6Q13608 980 aa1.64□□□□□ -2.15
MIR548I3-201ENST00000408378 DHX34Q14147 1143 aaKnown RBP1.64□□□□□ -2.15
MIR548I3-201ENST00000408378 SLC29A2Q14542 456 aa1.64□□□□□ -2.15
MIR548I3-201ENST00000408378 MON1BQ7L1V2 547 aa1.64□□□□□ -2.15
MIR548I3-201ENST00000408378 KRT28Q7Z3Y7 464 aa1.64□□□□□ -2.15
MIR548I3-201ENST00000408378 NPM2Q86SE8 214 aaKnown RBP1.64□□□□□ -2.15
MIR548I3-201ENST00000408378 ADGRA1Q86SQ6 560 aa1.64□□□□□ -2.15
MIR548I3-201ENST00000408378 DPP10Q8N608 796 aa1.64□□□□□ -2.15
MIR548I3-201ENST00000408378 HORMAD2Q8N7B1 307 aa1.64□□□□□ -2.15
MIR548I3-201ENST00000408378 OR52L2PQ8NGH6 319 aa1.64□□□□□ -2.15
MIR548I3-201ENST00000408378 BICD2Q8TD16 824 aa1.64□□□□□ -2.15
MIR548I3-201ENST00000408378 SMCR8Q8TEV9 937 aaPredicted RBP1.64□□□□□ -2.15
MIR548I3-201ENST00000408378 GFM1Q96RP9 751 aaKnown RBP1.64□□□□□ -2.15
MIR548I3-201ENST00000408378 TNFSF13BQ9Y275 285 aa1.64□□□□□ -2.15
MIR548I3-201ENST00000408378 SLC4A4Q9Y6R1 1079 aa1.64□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms