RNA–Protein interactions for RNA: YPR138C

MEP3, Transcript of Ammonium permease of high capacity and low affinity, yeast

Gene MEP3, Length 1,470 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MEP3	YPR138C	SHC1	P39000	512 aa		10.84	□□□□□ -0.67
MEP3	YPR138C	SNF7	P39929	240 aa	Known RBP	10.84	□□□□□ -0.67
MEP3	YPR138C	DJP1	P40564	432 aa		10.84	□□□□□ -0.67
MEP3	YPR138C	HO	P09932	586 aa		10.83	□□□□□ -0.68
MEP3	YPR138C	RPL19A	P0CX82	189 aa	Known RBP	10.83	□□□□□ -0.68
MEP3	YPR138C	RPL19B	P0CX83	189 aa	Predicted RBP	10.83	□□□□□ -0.68
MEP3	YPR138C	IMP2'	P32351	346 aa		10.83	□□□□□ -0.68
MEP3	YPR138C	FBP26	P32604	452 aa		10.83	□□□□□ -0.68
MEP3	YPR138C	RRP8	P38961	392 aa	Known RBP	10.83	□□□□□ -0.68
MEP3	YPR138C	APL6	P46682	809 aa		10.83	□□□□□ -0.68
MEP3	YPR138C	ACK1	Q07622	623 aa	Predicted RBP	10.83	□□□□□ -0.68
MEP3	YPR138C	FLO11	P08640	1367 aa		10.83	□□□□□ -0.68
MEP3	YPR138C	MATALPHA2	P0CY08	210 aa		10.82	□□□□□ -0.68
MEP3	YPR138C	HMLALPHA2	P0CY09	210 aa		10.82	□□□□□ -0.68
MEP3	YPR138C	ROX1	P25042	368 aa		10.82	□□□□□ -0.68
MEP3	YPR138C	MSP1	P28737	362 aa		10.82	□□□□□ -0.68
MEP3	YPR138C	BDH2	P39713	417 aa		10.82	□□□□□ -0.68
MEP3	YPR138C	VID28	P40547	921 aa		10.82	□□□□□ -0.68
MEP3	YPR138C	GSM1	P42950	618 aa		10.82	□□□□□ -0.68
MEP3	YPR138C	PIP2	P52960	996 aa		10.82	□□□□□ -0.68
MEP3	YPR138C	PSK2	Q08217	1101 aa		10.82	□□□□□ -0.68
MEP3	YPR138C	RRG1	Q12167	365 aa	Predicted RBP	10.82	□□□□□ -0.68
MEP3	YPR138C	BIK1	P11709	440 aa		10.81	□□□□□ -0.68
MEP3	YPR138C	RER2	P35196	286 aa		10.81	□□□□□ -0.68
MEP3	YPR138C	YHL017W	P38745	532 aa		10.81	□□□□□ -0.68
MEP3	YPR138C	RTS1	P38903	757 aa		10.81	□□□□□ -0.68
MEP3	YPR138C	HRQ1	Q05549	1077 aa		10.81	□□□□□ -0.68
MEP3	YPR138C	CHO2	P05374	869 aa	Known RBP	10.81	□□□□□ -0.68
MEP3	YPR138C	SLN1	P39928	1220 aa	Predicted RBP	10.81	□□□□□ -0.68
MEP3	YPR138C	CTF18	P49956	741 aa		10.81	□□□□□ -0.68
MEP3	YPR138C	YKE2	P52553	114 aa		10.81	□□□□□ -0.68
MEP3	YPR138C	HST1	P53685	503 aa		10.81	□□□□□ -0.68
MEP3	YPR138C	ARP5	P53946	755 aa		10.81	□□□□□ -0.68
MEP3	YPR138C	UFD2	P54860	961 aa		10.81	□□□□□ -0.68
MEP3	YPR138C	RPS15	Q01855	142 aa	Known RBP	10.81	□□□□□ -0.68
MEP3	YPR138C	HAP5	Q02516	242 aa		10.81	□□□□□ -0.68
MEP3	YPR138C	ESF1	Q06344	628 aa	Known RBP	10.81	□□□□□ -0.68
MEP3	YPR138C	MYO1	P08964	1928 aa		10.8	□□□□□ -0.68
MEP3	YPR138C	CLC1	P17891	233 aa		10.8	□□□□□ -0.68
MEP3	YPR138C	TTI1	P36097	1038 aa		10.8	□□□□□ -0.68
MEP3	YPR138C	YHL050C	P38721	697 aa		10.8	□□□□□ -0.68
MEP3	YPR138C	HYR1	P40581	163 aa	Known RBP	10.8	□□□□□ -0.68
MEP3	YPR138C	PUS6	P53294	404 aa		10.8	□□□□□ -0.68
MEP3	YPR138C	EST2	Q06163	884 aa		10.8	□□□□□ -0.68
MEP3	YPR138C	RPS7A	P26786	190 aa	Known RBP	10.79	□□□□□ -0.68
MEP3	YPR138C	DMA1	P38823	416 aa		10.79	□□□□□ -0.68
MEP3	YPR138C	NSG2	P53898	299 aa		10.79	□□□□□ -0.68
MEP3	YPR138C	ELG1	Q12050	791 aa		10.79	□□□□□ -0.68
MEP3	YPR138C	YPL150W	Q12152	901 aa		10.79	□□□□□ -0.68
MEP3	YPR138C	TOP1	P04786	769 aa		10.78	□□□□□ -0.68
MEP3	YPR138C	MYO3	P36006	1272 aa		10.78	□□□□□ -0.68
MEP3	YPR138C	YLR407W	Q06070	228 aa		10.78	□□□□□ -0.68
MEP3	YPR138C	YPL260W	Q08977	551 aa		10.78	□□□□□ -0.68
MEP3	YPR138C	MPH3	P0CE00	602 aa		10.77	□□□□□ -0.69
MEP3	YPR138C	AFG2	P32794	780 aa		10.77	□□□□□ -0.69
MEP3	YPR138C	CPA2	P03965	1118 aa	Known RBP	10.76	□□□□□ -0.69
MEP3	YPR138C	ANP1	P32629	500 aa		10.76	□□□□□ -0.69
MEP3	YPR138C	PRX1	P34227	261 aa	Known RBP	10.76	□□□□□ -0.69
MEP3	YPR138C	MRD1	Q06106	887 aa	Known RBP	10.76	□□□□□ -0.69
MEP3	YPR138C	ATG20	Q07528	640 aa		10.76	□□□□□ -0.69
MEP3	YPR138C	RAD61	Q99359	647 aa		10.76	□□□□□ -0.69
MEP3	YPR138C	YJL171C	P46992	396 aa		10.75	□□□□□ -0.69
MEP3	YPR138C	PEX14	P53112	341 aa		10.75	□□□□□ -0.69
MEP3	YPR138C	CRF1	Q04930	467 aa		10.75	□□□□□ -0.69
MEP3	YPR138C	TFC6	Q06339	672 aa		10.74	□□□□□ -0.69
MEP3	YPR138C	KEX1	P09620	729 aa		10.74	□□□□□ -0.69
MEP3	YPR138C	MSM1	P22438	575 aa		10.74	□□□□□ -0.69
MEP3	YPR138C	VID27	P40157	782 aa		10.74	□□□□□ -0.69
MEP3	YPR138C	CIR1	P42940	261 aa		10.74	□□□□□ -0.69
MEP3	YPR138C	FPK1	P53739	893 aa		10.74	□□□□□ -0.69
MEP3	YPR138C	HDA1	P53973	706 aa		10.74	□□□□□ -0.69
MEP3	YPR138C	COG8	Q04632	607 aa		10.74	□□□□□ -0.69
MEP3	YPR138C	AIM44	Q99299	758 aa		10.74	□□□□□ -0.69
MEP3	YPR138C	PFK2	P16862	959 aa	Known RBP RIP-Chip data	10.73	□□□□□ -0.69	not detected
MEP3	YPR138C	CBP3	P21560	335 aa		10.73	□□□□□ -0.69
MEP3	YPR138C	MSH4	P40965	878 aa	Predicted RBP	10.73	□□□□□ -0.69
MEP3	YPR138C	BUD6	P41697	788 aa		10.73	□□□□□ -0.69
MEP3	YPR138C	PTK2	P47116	818 aa	Known RBP	10.73	□□□□□ -0.69
MEP3	YPR138C	YGL081W	P53156	320 aa		10.73	□□□□□ -0.69
MEP3	YPR138C	PCL8	Q08966	492 aa		10.73	□□□□□ -0.69
MEP3	YPR138C	KEL3	Q08979	651 aa	Predicted RBP	10.73	□□□□□ -0.69
MEP3	YPR138C	ARL1	P38116	183 aa	Known RBP	10.72	□□□□□ -0.69
MEP3	YPR138C	AKR1	P39010	764 aa		10.72	□□□□□ -0.69
MEP3	YPR138C	UTP7	P40055	554 aa	Known RBP	10.72	□□□□□ -0.69
MEP3	YPR138C	EPL1	P43572	832 aa		10.72	□□□□□ -0.69
MEP3	YPR138C	PEX19	Q07418	342 aa		10.72	□□□□□ -0.69
MEP3	YPR138C	MAK31	P23059	88 aa		10.71	□□□□□ -0.69
MEP3	YPR138C	RIT1	P23796	513 aa		10.71	□□□□□ -0.69
MEP3	YPR138C	ELM1	P32801	640 aa		10.71	□□□□□ -0.69
MEP3	YPR138C	BMH2	P34730	273 aa	Known RBP	10.71	□□□□□ -0.69
MEP3	YPR138C	UBP9	P39967	754 aa		10.71	□□□□□ -0.69
MEP3	YPR138C	TGL3	P40308	642 aa		10.71	□□□□□ -0.69
MEP3	YPR138C	ENT3	P47160	408 aa		10.71	□□□□□ -0.69
MEP3	YPR138C	SCY1	P53009	804 aa		10.71	□□□□□ -0.69
MEP3	YPR138C	MTC3	P53077	123 aa		10.71	□□□□□ -0.69
MEP3	YPR138C	MYO5	Q04439	1219 aa	Known RBP	10.71	□□□□□ -0.69
MEP3	YPR138C	MBR1	P23493	339 aa		10.7	□□□□□ -0.7
MEP3	YPR138C	SIS1	P25294	352 aa	Known RBP	10.7	□□□□□ -0.7
MEP3	YPR138C	PRO3	P32263	286 aa	Known RBP	10.7	□□□□□ -0.7
MEP3	YPR138C	ALG2	P43636	503 aa		10.7	□□□□□ -0.7

Retrieved 100 of 5,963 RNA–protein pairs in 86.9 ms