RNA–Protein interactions for RNA: YPL177C

CUP9, Transcript of Homeodomain-containing transcriptional repressor, yeastyeast

Gene CUP9, Length 921 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUP9YPL177C PUB1P32588 453 aaKnown RBP RIP-Chip data6.37□□□□□ -1.39 RIP-Chip
CUP9YPL177C CHS2P14180 963 aa6.36□□□□□ -1.39
CUP9YPL177C LIP5P32875 414 aa6.36□□□□□ -1.39
CUP9YPL177C HXT8P40886 569 aa6.36□□□□□ -1.39
CUP9YPL177C AVT1P47082 602 aa6.36□□□□□ -1.39
CUP9YPL177C GUP1P53154 560 aa6.36□□□□□ -1.39
CUP9YPL177C YGR130CP53278 816 aa6.36□□□□□ -1.39
CUP9YPL177C CWC15Q03772 175 aaKnown RBP6.36□□□□□ -1.39
CUP9YPL177C RGD2P43556 714 aa6.35□□□□□ -1.39
CUP9YPL177C YML083CQ04526 418 aa6.35□□□□□ -1.39
CUP9YPL177C BRE4Q07660 1125 aa6.35□□□□□ -1.39
CUP9YPL177C NOB1Q08444 459 aaKnown RBP6.35□□□□□ -1.39
CUP9YPL177C FUS1P11710 512 aa6.34□□□□□ -1.39
CUP9YPL177C POL5P39985 1022 aaKnown RBP6.34□□□□□ -1.39
CUP9YPL177C APC11Q12157 165 aa6.34□□□□□ -1.39
CUP9YPL177C BOI1P38041 980 aaKnown RBP6.33□□□□□ -1.4
CUP9YPL177C AIM46P38885 310 aa6.33□□□□□ -1.4
CUP9YPL177C LEM3P42838 414 aa6.33□□□□□ -1.4
CUP9YPL177C MAG2Q06436 670 aaKnown RBP6.33□□□□□ -1.4
CUP9YPL177C FIR1P40020 876 aa6.32□□□□□ -1.4
CUP9YPL177C SPO74P45819 413 aa6.32□□□□□ -1.4
CUP9YPL177C YBR287WP38355 427 aa6.31□□□□□ -1.4
CUP9YPL177C NCE103P53615 221 aa6.31□□□□□ -1.4
CUP9YPL177C AOS1Q06624 347 aa6.31□□□□□ -1.4
CUP9YPL177C CYC7P00045 113 aa6.3□□□□□ -1.4
CUP9YPL177C ELM1P32801 640 aa6.3□□□□□ -1.4
CUP9YPL177C NTA1P40354 457 aa6.3□□□□□ -1.4
CUP9YPL177C HVG1P0CE11 249 aa6.29□□□□□ -1.4
CUP9YPL177C RPB10P22139 70 aa6.29□□□□□ -1.4
CUP9YPL177C MAE1P36013 669 aaKnown RBP6.29□□□□□ -1.4
CUP9YPL177C SUT1P53032 299 aaKnown RBP6.29□□□□□ -1.4
CUP9YPL177C PNP1Q05788 311 aa6.29□□□□□ -1.4
CUP9YPL177C ELG1Q12050 791 aa6.29□□□□□ -1.4
CUP9YPL177C SSA1P10591 642 aaKnown RBP6.28□□□□□ -1.4
CUP9YPL177C SPO71Q03868 1245 aa6.28□□□□□ -1.4
CUP9YPL177C TIF6Q12522 245 aaKnown RBP6.28□□□□□ -1.4
CUP9YPL177C ERS1P17261 260 aa6.27□□□□□ -1.41
CUP9YPL177C SEA4P38164 1038 aa6.27□□□□□ -1.41
CUP9YPL177C MSB1P21339 1137 aaKnown RBP6.26□□□□□ -1.41
CUP9YPL177C YJR124CP47159 448 aa6.26□□□□□ -1.41
CUP9YPL177C YNR065CP53751 1116 aa6.26□□□□□ -1.41
CUP9YPL177C GLO4Q12320 285 aa6.26□□□□□ -1.41
CUP9YPL177C LSO1Q3E827 93 aa6.26□□□□□ -1.41
CUP9YPL177C RRN6P32786 894 aa6.25□□□□□ -1.41
CUP9YPL177C RAD55P38953 406 aa6.25□□□□□ -1.41
CUP9YPL177C NEO1P40527 1151 aa6.25□□□□□ -1.41
CUP9YPL177C HAS1Q03532 505 aaKnown RBP6.25□□□□□ -1.41
CUP9YPL177C GEF1P37020 779 aa6.24□□□□□ -1.41
CUP9YPL177C PSY2P40164 858 aa6.24□□□□□ -1.41
CUP9YPL177C IRS4P36115 615 aaKnown RBP6.23□□□□□ -1.41
CUP9YPL177C KIP3P53086 805 aaKnown RBP6.23□□□□□ -1.41
CUP9YPL177C PYC2P32327 1180 aaKnown RBP6.22□□□□□ -1.41
CUP9YPL177C SMC1P32908 1225 aa6.22□□□□□ -1.41
CUP9YPL177C RPL34AP87262 121 aaPredicted RBP6.22□□□□□ -1.41
CUP9YPL177C SDH1Q00711 640 aa6.21□□□□□ -1.42
CUP9YPL177C BOL3P39724 118 aa6.2□□□□□ -1.42
CUP9YPL177C GIC2Q06648 383 aa6.2□□□□□ -1.42
CUP9YPL177C GCD1P09032 578 aaPredicted RBP6.19□□□□□ -1.42
CUP9YPL177C FET4P40988 552 aa6.19□□□□□ -1.42
CUP9YPL177C FAR11P53917 953 aa6.17□□□□□ -1.42
CUP9YPL177C RNQ1P25367 405 aa6.16□□□□□ -1.42
CUP9YPL177C LRG1P35688 1017 aa6.16□□□□□ -1.42
CUP9YPL177C CTR9P89105 1077 aa6.16□□□□□ -1.42
CUP9YPL177C YOR223WQ12015 292 aa6.16□□□□□ -1.42
CUP9YPL177C FUR4P05316 633 aaKnown RBP6.15□□□□□ -1.42
CUP9YPL177C SEG2P34250 1132 aa6.15□□□□□ -1.42
CUP9YPL177C COBP00163 385 aa6.14□□□□□ -1.43
CUP9YPL177C CDC3P32457 520 aaKnown RBP6.13□□□□□ -1.43
CUP9YPL177C WHI3P34761 661 aaKnown RBP6.13□□□□□ -1.43
CUP9YPL177C GPT2P36148 743 aa6.13□□□□□ -1.43
CUP9YPL177C UBP5P39944 805 aa6.13□□□□□ -1.43
CUP9YPL177C MMM1P41800 426 aa6.13□□□□□ -1.43
CUP9YPL177C POL12P38121 705 aaPredicted RBP6.12□□□□□ -1.43
CUP9YPL177C YMR074CQ04773 145 aa6.12□□□□□ -1.43
CUP9YPL177C RIM11P38615 370 aa6.11□□□□□ -1.43
CUP9YPL177C CIT3P43635 486 aa6.11□□□□□ -1.43
CUP9YPL177C DFG16Q99234 619 aa6.11□□□□□ -1.43
CUP9YPL177C NIT1P40447 199 aa6.1□□□□□ -1.43
CUP9YPL177C GCV1P48015 400 aa6.1□□□□□ -1.43
CUP9YPL177C ECL1P48235 211 aa6.1□□□□□ -1.43
CUP9YPL177C DOT1Q04089 582 aaKnown RBP6.1□□□□□ -1.43
CUP9YPL177C YIG1Q08956 461 aa6.1□□□□□ -1.43
CUP9YPL177C CMR1Q12510 522 aaKnown RBP6.1□□□□□ -1.43
CUP9YPL177C DUR3P33413 735 aa6.09□□□□□ -1.43
CUP9YPL177C RSC4Q02206 625 aa6.09□□□□□ -1.43
CUP9YPL177C HAT1Q12341 374 aa6.08□□□□□ -1.44
CUP9YPL177C HTS1P07263 546 aaKnown RBP6.07□□□□□ -1.44
CUP9YPL177C PRP5P21372 849 aaPredicted RBP6.07□□□□□ -1.44
CUP9YPL177C NPR1P22211 790 aa6.07□□□□□ -1.44
CUP9YPL177C OYE3P41816 400 aaPredicted RBP6.07□□□□□ -1.44
CUP9YPL177C RCM1P53972 490 aa6.06□□□□□ -1.44
CUP9YPL177C UFD2P54860 961 aa6.06□□□□□ -1.44
CUP9YPL177C KAR5Q04746 504 aa6.06□□□□□ -1.44
CUP9YPL177C YOR059CQ08448 450 aaKnown RBP6.06□□□□□ -1.44
CUP9YPL177C YLL054CQ12244 843 aa6.06□□□□□ -1.44
CUP9YPL177C YHL008CP38750 627 aa6.05□□□□□ -1.44
CUP9YPL177C YML020WQ03722 664 aa6.05□□□□□ -1.44
CUP9YPL177C MSH6Q03834 1242 aa6.05□□□□□ -1.44
CUP9YPL177C NSI1Q12457 570 aa6.05□□□□□ -1.44
CUP9YPL177C HSP78P33416 811 aa6.04□□□□□ -1.44
Retrieved 100 of 5,963 RNA–protein pairs in 8.8 ms