RNA–Protein interactions for RNA: YOR329C

SCD5, Transcript of Protein required for normal actin organization and endocytosis, yeast

Gene SCD5, Length 2,619 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SCD5	YOR329C	TAH18	Q12181	623 aa		2.73	□□□□□ -1.97
SCD5	YOR329C	SWC3	P31376	625 aa		2.72	□□□□□ -1.97
SCD5	YOR329C	AAP1	P37898	856 aa	Known RBP	2.72	□□□□□ -1.97
SCD5	YOR329C	CRG1	P38892	291 aa	RIP-Chip data	2.72	□□□□□ -1.97	not detected
SCD5	YOR329C	VHR2	P40041	505 aa		2.72	□□□□□ -1.97
SCD5	YOR329C	HAP5	Q02516	242 aa		2.72	□□□□□ -1.97
SCD5	YOR329C	ACK1	Q07622	623 aa	Predicted RBP	2.72	□□□□□ -1.97
SCD5	YOR329C	RIM20	Q12033	661 aa		2.72	□□□□□ -1.97
SCD5	YOR329C	RRI2	Q12348	645 aa		2.72	□□□□□ -1.97
SCD5	YOR329C	THS1	P04801	734 aa	Known RBP	2.72	□□□□□ -1.97
SCD5	YOR329C	SEC18	P18759	758 aa	Known RBP	2.72	□□□□□ -1.97
SCD5	YOR329C	BRN1	P38170	754 aa		2.72	□□□□□ -1.97
SCD5	YOR329C	ICP55	P40051	511 aa		2.72	□□□□□ -1.97
SCD5	YOR329C	RSM25	P40496	264 aa		2.72	□□□□□ -1.97
SCD5	YOR329C	MSH4	P40965	878 aa	Predicted RBP	2.72	□□□□□ -1.97
SCD5	YOR329C	ALO1	P54783	526 aa	Known RBP	2.72	□□□□□ -1.97
SCD5	YOR329C	SPN1	Q06505	410 aa	Predicted RBP	2.72	□□□□□ -1.97
SCD5	YOR329C	KEX1	P09620	729 aa		2.72	□□□□□ -1.97
SCD5	YOR329C	CLC1	P17891	233 aa		2.72	□□□□□ -1.97
SCD5	YOR329C	ELM1	P32801	640 aa		2.72	□□□□□ -1.97
SCD5	YOR329C	YGR122W	P53272	402 aa		2.72	□□□□□ -1.97
SCD5	YOR329C	UBP16	Q02863	499 aa		2.72	□□□□□ -1.97
SCD5	YOR329C	SAS4	Q04003	481 aa		2.72	□□□□□ -1.97
SCD5	YOR329C	RPL19A	P0CX82	189 aa	Known RBP	2.71	□□□□□ -1.98
SCD5	YOR329C	RPL19B	P0CX83	189 aa	Predicted RBP	2.71	□□□□□ -1.98
SCD5	YOR329C	BIK1	P11709	440 aa		2.71	□□□□□ -1.98
SCD5	YOR329C	PGI1	P12709	554 aa	Known RBP	2.71	□□□□□ -1.98
SCD5	YOR329C	CBP3	P21560	335 aa		2.71	□□□□□ -1.98
SCD5	YOR329C	GLC3	P32775	704 aa		2.71	□□□□□ -1.98
SCD5	YOR329C	ILV3	P39522	585 aa	Known RBP	2.71	□□□□□ -1.98
SCD5	YOR329C	IRC8	P47046	822 aa		2.71	□□□□□ -1.98
SCD5	YOR329C	YKE2	P52553	114 aa		2.71	□□□□□ -1.98
SCD5	YOR329C	MRPS35	P53292	345 aa		2.71	□□□□□ -1.98
SCD5	YOR329C	CRF1	Q04930	467 aa		2.71	□□□□□ -1.98
SCD5	YOR329C	AI2	P03876	854 aa		2.71	□□□□□ -1.98
SCD5	YOR329C	HVG1	P0CE11	249 aa		2.71	□□□□□ -1.98
SCD5	YOR329C	ROX1	P25042	368 aa		2.71	□□□□□ -1.98
SCD5	YOR329C	PEP3	P27801	918 aa		2.71	□□□□□ -1.98
SCD5	YOR329C	KRE2	P27809	442 aa		2.71	□□□□□ -1.98
SCD5	YOR329C	MSP1	P28737	362 aa		2.71	□□□□□ -1.98
SCD5	YOR329C	SMY1	P32364	656 aa	Known RBP	2.71	□□□□□ -1.98
SCD5	YOR329C	GLO3	P38682	493 aa	Known RBP	2.71	□□□□□ -1.98
SCD5	YOR329C	RRP8	P38961	392 aa	Known RBP	2.71	□□□□□ -1.98
SCD5	YOR329C	CEX1	Q12453	761 aa		2.71	□□□□□ -1.98
SCD5	YOR329C	MATALPHA2	P0CY08	210 aa		2.7	□□□□□ -1.98
SCD5	YOR329C	HMLALPHA2	P0CY09	210 aa		2.7	□□□□□ -1.98
SCD5	YOR329C	MGM1	P32266	881 aa		2.7	□□□□□ -1.98
SCD5	YOR329C	BOI1	P38041	980 aa	Known RBP	2.7	□□□□□ -1.98
SCD5	YOR329C	BSD2	P38356	321 aa		2.7	□□□□□ -1.98
SCD5	YOR329C	JJJ2	P46997	583 aa		2.7	□□□□□ -1.98
SCD5	YOR329C	ELG1	Q12050	791 aa		2.7	□□□□□ -1.98
SCD5	YOR329C	NGR1	P32831	672 aa	Known RBP	2.7	□□□□□ -1.98
SCD5	YOR329C	RFT1	P38206	574 aa	Predicted RBP	2.7	□□□□□ -1.98
SCD5	YOR329C	RTS1	P38903	757 aa		2.7	□□□□□ -1.98
SCD5	YOR329C	HAL5	P38970	855 aa	Known RBP	2.7	□□□□□ -1.98
SCD5	YOR329C	AIM9	P40053	627 aa	Known RBP	2.7	□□□□□ -1.98
SCD5	YOR329C	YFH7	P43591	353 aa		2.7	□□□□□ -1.98
SCD5	YOR329C	PIP2	P52960	996 aa		2.7	□□□□□ -1.98
SCD5	YOR329C	PKH3	Q03306	898 aa	Predicted RBP	2.7	□□□□□ -1.98
SCD5	YOR329C	KAR5	Q04746	504 aa		2.7	□□□□□ -1.98
SCD5	YOR329C	THI3	Q07471	609 aa		2.7	□□□□□ -1.98
SCD5	YOR329C	YPL150W	Q12152	901 aa		2.7	□□□□□ -1.98
SCD5	YOR329C	TRL1	P09880	827 aa	Known RBP	2.69	□□□□□ -1.98
SCD5	YOR329C	YKU70	P32807	602 aa		2.69	□□□□□ -1.98
SCD5	YOR329C	BMH2	P34730	273 aa	Known RBP	2.69	□□□□□ -1.98
SCD5	YOR329C	RPN1	P38764	993 aa	Known RBP	2.69	□□□□□ -1.98
SCD5	YOR329C	SLN1	P39928	1220 aa	Predicted RBP	2.69	□□□□□ -1.98
SCD5	YOR329C	TFG2	P41896	400 aa	Predicted RBP	2.69	□□□□□ -1.98
SCD5	YOR329C	KRI1	P42846	591 aa	Known RBP	2.69	□□□□□ -1.98
SCD5	YOR329C	APL6	P46682	809 aa		2.69	□□□□□ -1.98
SCD5	YOR329C	SNU71	P53207	620 aa	Known RBP	2.69	□□□□□ -1.98
SCD5	YOR329C	RTC4	P53850	401 aa		2.69	□□□□□ -1.98
SCD5	YOR329C	TIM50	Q02776	476 aa		2.69	□□□□□ -1.98
SCD5	YOR329C	FCP1	Q03254	732 aa		2.69	□□□□□ -1.98
SCD5	YOR329C	PRP42	Q03776	544 aa	Known RBP	2.69	□□□□□ -1.98
SCD5	YOR329C	EST2	Q06163	884 aa		2.69	□□□□□ -1.98
SCD5	YOR329C	WRS1	Q12109	432 aa	Known RBP	2.69	□□□□□ -1.98
SCD5	YOR329C	TOP1	P04786	769 aa		2.69	□□□□□ -1.98
SCD5	YOR329C	ICL1	P28240	557 aa	Predicted RBP	2.69	□□□□□ -1.98
SCD5	YOR329C	FBP26	P32604	452 aa		2.69	□□□□□ -1.98
SCD5	YOR329C	FRD1	P32614	470 aa	Known RBP	2.69	□□□□□ -1.98
SCD5	YOR329C	ARL1	P38116	183 aa	Known RBP	2.69	□□□□□ -1.98
SCD5	YOR329C	MAL31	P38156	614 aa		2.69	□□□□□ -1.98
SCD5	YOR329C	TOM71	P38825	639 aa	Known RBP	2.69	□□□□□ -1.98
SCD5	YOR329C	PEA2	P40091	420 aa		2.69	□□□□□ -1.98
SCD5	YOR329C	BUD6	P41697	788 aa		2.69	□□□□□ -1.98
SCD5	YOR329C	YNL193W	P53870	558 aa		2.69	□□□□□ -1.98
SCD5	YOR329C	GDE1	Q02979	1223 aa		2.69	□□□□□ -1.98
SCD5	YOR329C	CST9	Q06032	482 aa		2.69	□□□□□ -1.98
SCD5	YOR329C	PCL8	Q08966	492 aa		2.69	□□□□□ -1.98
SCD5	YOR329C	RLF2	Q12495	606 aa		2.69	□□□□□ -1.98
SCD5	YOR329C	SPC110	P32380	944 aa		2.68	□□□□□ -1.98
SCD5	YOR329C	MOT2	P34909	587 aa	Known RBP	2.68	□□□□□ -1.98
SCD5	YOR329C	HXT13	P39924	564 aa		2.68	□□□□□ -1.98
SCD5	YOR329C	ARP5	P53946	755 aa		2.68	□□□□□ -1.98
SCD5	YOR329C	CWC15	Q03772	175 aa	Known RBP	2.68	□□□□□ -1.98
SCD5	YOR329C	RPN7	Q06103	429 aa	Known RBP	2.68	□□□□□ -1.98
SCD5	YOR329C	TOS4	Q06266	489 aa		2.68	□□□□□ -1.98
SCD5	YOR329C	ESF1	Q06344	628 aa	Known RBP	2.68	□□□□□ -1.98
SCD5	YOR329C	FAS2	P19097	1887 aa	Known RBP	2.68	□□□□□ -1.98

Retrieved 100 of 5,963 RNA–protein pairs in 18.1 ms