RNA–Protein interactions for RNA: YOR106W

VAM3, Transcript of Syntaxin-like vacuolar t-SNARE, yeastyeast

Gene VAM3, Length 852 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAM3YOR106W TAT1P38085 619 aa7.83□□□□□ -1.16
VAM3YOR106W LSB3P43603 459 aaKnown RBP7.83□□□□□ -1.16
VAM3YOR106W NUT2Q06213 157 aa7.83□□□□□ -1.16
VAM3YOR106W YCK2P23292 546 aaKnown RBP7.82□□□□□ -1.16
VAM3YOR106W YHL050CP38721 697 aa7.82□□□□□ -1.16
VAM3YOR106W YHR219WP38900 624 aa7.82□□□□□ -1.16
VAM3YOR106W STM1P39015 273 aaKnown RBP7.82□□□□□ -1.16
VAM3YOR106W PRY1P47032 299 aa7.82□□□□□ -1.16
VAM3YOR106W GUP1P53154 560 aa7.82□□□□□ -1.16
VAM3YOR106W CDC55Q00362 526 aa7.82□□□□□ -1.16
VAM3YOR106W BSC2Q05611 235 aa7.82□□□□□ -1.16
VAM3YOR106W SOG2Q08817 791 aa7.82□□□□□ -1.16
VAM3YOR106W FRT1Q99332 602 aa7.82□□□□□ -1.16
VAM3YOR106W TFA2P36145 328 aa7.81□□□□□ -1.16
VAM3YOR106W SLN1P39928 1220 aaPredicted RBP7.81□□□□□ -1.16
VAM3YOR106W LEM3P42838 414 aa7.81□□□□□ -1.16
VAM3YOR106W BUD9P53226 547 aa7.8□□□□□ -1.16
VAM3YOR106W MNL2Q12205 849 aa7.8□□□□□ -1.16
VAM3YOR106W TY4B-PA0A0B7P3V8 1104 aa7.79□□□□□ -1.16
VAM3YOR106W CCT8P47079 568 aaKnown RBP7.79□□□□□ -1.16
VAM3YOR106W TY4A-HQ6Q5P6 413 aa7.79□□□□□ -1.16
VAM3YOR106W SAC7P17121 654 aa7.78□□□□□ -1.16
VAM3YOR106W YHL008CP38750 627 aa7.78□□□□□ -1.16
VAM3YOR106W PAN5P38787 379 aa7.78□□□□□ -1.16
VAM3YOR106W NEO1P40527 1151 aa7.78□□□□□ -1.16
VAM3YOR106W YJR124CP47159 448 aa7.78□□□□□ -1.16
VAM3YOR106W CTR9P89105 1077 aa7.77□□□□□ -1.17
VAM3YOR106W GLO4Q12320 285 aa7.77□□□□□ -1.17
VAM3YOR106W AI3P03877 415 aa7.76□□□□□ -1.17
VAM3YOR106W LSB6P42951 607 aa7.76□□□□□ -1.17
VAM3YOR106W YNR065CP53751 1116 aa7.76□□□□□ -1.17
VAM3YOR106W DSE4P53753 1117 aa7.76□□□□□ -1.17
VAM3YOR106W GAS5Q08193 484 aa7.76□□□□□ -1.17
VAM3YOR106W MCA1Q08601 432 aa7.76□□□□□ -1.17
VAM3YOR106W SFA1P32771 386 aa7.75□□□□□ -1.17
VAM3YOR106W AMN1P38285 549 aaPredicted RBP7.75□□□□□ -1.17
VAM3YOR106W FET4P40988 552 aa7.75□□□□□ -1.17
VAM3YOR106W SAM37P50110 327 aa7.75□□□□□ -1.17
VAM3YOR106W SPO71Q03868 1245 aa7.75□□□□□ -1.17
VAM3YOR106W PPX1P38698 397 aa7.74□□□□□ -1.17
VAM3YOR106W GPI13Q07830 1017 aa7.74□□□□□ -1.17
VAM3YOR106W NOC3Q07896 663 aaPredicted RBP7.74□□□□□ -1.17
VAM3YOR106W COBP00163 385 aa7.73□□□□□ -1.17
VAM3YOR106W FLP1P03870 423 aa7.73□□□□□ -1.17
VAM3YOR106W INP54Q08227 384 aaKnown RBP7.73□□□□□ -1.17
VAM3YOR106W MSC6Q08818 692 aaKnown RBP7.73□□□□□ -1.17
VAM3YOR106W HVG1P0CE11 249 aa7.72□□□□□ -1.17
VAM3YOR106W SEC20P28791 383 aa7.72□□□□□ -1.17
VAM3YOR106W CIC1P38779 376 aaKnown RBP7.72□□□□□ -1.17
VAM3YOR106W THI12P42883 340 aa7.72□□□□□ -1.17
VAM3YOR106W THI5P43534 340 aa7.72□□□□□ -1.17
VAM3YOR106W THI11P47183 340 aa7.72□□□□□ -1.17
VAM3YOR106W HAS1Q03532 505 aaKnown RBP7.72□□□□□ -1.17
VAM3YOR106W THI13Q07748 340 aa7.72□□□□□ -1.17
VAM3YOR106W RSC6P25632 483 aa7.71□□□□□ -1.18
VAM3YOR106W SLD2P34252 453 aa7.71□□□□□ -1.18
VAM3YOR106W POL5P39985 1022 aaKnown RBP7.71□□□□□ -1.18
VAM3YOR106W ARI1P53111 347 aaKnown RBP7.71□□□□□ -1.18
VAM3YOR106W MSH6Q03834 1242 aa7.71□□□□□ -1.18
VAM3YOR106W MAE1P36013 669 aaKnown RBP7.7□□□□□ -1.18
VAM3YOR106W ELG1Q12050 791 aa7.7□□□□□ -1.18
VAM3YOR106W TY1A-NL1Q12391 440 aaKnown RBP7.7□□□□□ -1.18
VAM3YOR106W CMR1Q12510 522 aaKnown RBP7.7□□□□□ -1.18
VAM3YOR106W NPR1P22211 790 aa7.69□□□□□ -1.18
VAM3YOR106W GCD6P32501 712 aaKnown RBP7.69□□□□□ -1.18
VAM3YOR106W RIM11P38615 370 aa7.69□□□□□ -1.18
VAM3YOR106W YPL034WQ03083 165 aa7.69□□□□□ -1.18
VAM3YOR106W PMT7Q06644 662 aa7.69□□□□□ -1.18
VAM3YOR106W SBP1P10080 294 aaKnown RBP7.67□□□□□ -1.18
VAM3YOR106W DUR3P33413 735 aa7.67□□□□□ -1.18
VAM3YOR106W IPL1P38991 367 aa7.67□□□□□ -1.18
VAM3YOR106W NUT1P53114 1132 aa7.67□□□□□ -1.18
VAM3YOR106W FAR11P53917 953 aa7.67□□□□□ -1.18
VAM3YOR106W YML020WQ03722 664 aa7.67□□□□□ -1.18
VAM3YOR106W YMR074CQ04773 145 aa7.66□□□□□ -1.18
VAM3YOR106W WHI5Q12416 295 aa7.66□□□□□ -1.18
VAM3YOR106W ERS1P17261 260 aa7.65□□□□□ -1.18
VAM3YOR106W COQ2P32378 372 aa7.65□□□□□ -1.18
VAM3YOR106W RVS167P39743 482 aaKnown RBP7.65□□□□□ -1.18
VAM3YOR106W MON1P53129 644 aa7.65□□□□□ -1.18
VAM3YOR106W SEN54Q02825 467 aaPredicted RBP7.65□□□□□ -1.18
VAM3YOR106W HTS1P07263 546 aaKnown RBP7.64□□□□□ -1.19
VAM3YOR106W PHO4P07270 312 aaKnown RBP7.64□□□□□ -1.19
VAM3YOR106W MCM5P29496 775 aaKnown RBP7.64□□□□□ -1.19
VAM3YOR106W MET4P32389 672 aa7.64□□□□□ -1.19
VAM3YOR106W VPS35P34110 944 aa7.64□□□□□ -1.19
VAM3YOR106W SAP155P43612 1002 aa7.64□□□□□ -1.19
VAM3YOR106W YCS4Q06156 1176 aa7.64□□□□□ -1.19
VAM3YOR106W PRP5P21372 849 aaPredicted RBP7.63□□□□□ -1.19
VAM3YOR106W KIP3P53086 805 aaKnown RBP7.63□□□□□ -1.19
VAM3YOR106W YAF9P53930 226 aa7.63□□□□□ -1.19
VAM3YOR106W YIG1Q08956 461 aa7.63□□□□□ -1.19
VAM3YOR106W YLL054CQ12244 843 aa7.63□□□□□ -1.19
VAM3YOR106W OXR1Q08952 273 aa7.62□□□□□ -1.19
VAM3YOR106W REC8Q12188 680 aa7.62□□□□□ -1.19
VAM3YOR106W AKR1P39010 764 aa7.61□□□□□ -1.19
VAM3YOR106W PGM1P33401 570 aaKnown RBP7.6□□□□□ -1.19
VAM3YOR106W DAK2P43550 591 aa7.6□□□□□ -1.19
VAM3YOR106W GCV1P48015 400 aa7.6□□□□□ -1.19
VAM3YOR106W UTP22P53254 1237 aaPredicted RBP7.6□□□□□ -1.19
Retrieved 100 of 5,963 RNA–protein pairs in 30.9 ms