RNA–Protein interactions for RNA: YNR031C

SSK2, Transcript of MAP kinase kinase kinase of HOG1 mitogen-activated signaling pathway, yeast

Gene SSK2, Length 4,740 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSK2	YNR031C	YDJ1	P25491	409 aa	Known RBP	1.83	□□□□□ -2.12
SSK2	YNR031C	CSE1	P33307	960 aa		1.83	□□□□□ -2.12
SSK2	YNR031C	PXL1	P36166	706 aa		1.83	□□□□□ -2.12
SSK2	YNR031C	ENP2	P48234	707 aa	Known RBP	1.83	□□□□□ -2.12
SSK2	YNR031C	BNI4	P53858	892 aa		1.83	□□□□□ -2.12
SSK2	YNR031C	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	1.83	□□□□□ -2.12	not detected
SSK2	YNR031C	HIF1	Q12373	385 aa		1.83	□□□□□ -2.12
SSK2	YNR031C	LDB19	Q12502	818 aa		1.83	□□□□□ -2.12
SSK2	YNR031C	CDC16	P09798	840 aa		1.82	□□□□□ -2.12
SSK2	YNR031C	PTP1	P25044	335 aa		1.82	□□□□□ -2.12
SSK2	YNR031C	HCM1	P25364	564 aa		1.82	□□□□□ -2.12
SSK2	YNR031C	PPH3	P32345	308 aa		1.82	□□□□□ -2.12
SSK2	YNR031C	TOA1	P32773	286 aa		1.82	□□□□□ -2.12
SSK2	YNR031C	RAT1	Q02792	1006 aa	Known RBP	1.82	□□□□□ -2.12
SSK2	YNR031C	GYL1	Q04322	720 aa		1.82	□□□□□ -2.12
SSK2	YNR031C	KEX1	P09620	729 aa		1.82	□□□□□ -2.12
SSK2	YNR031C	HYR1	P40581	163 aa	Known RBP	1.82	□□□□□ -2.12
SSK2	YNR031C	RTF1	P53064	558 aa		1.82	□□□□□ -2.12
SSK2	YNR031C	CDC73	Q06697	393 aa		1.82	□□□□□ -2.12
SSK2	YNR031C	FTH1	P38310	465 aa		1.82	□□□□□ -2.12
SSK2	YNR031C	CAB1	Q04430	367 aa		1.82	□□□□□ -2.12
SSK2	YNR031C	MCM1	P11746	286 aa		1.82	□□□□□ -2.12
SSK2	YNR031C	BIO5	P53744	561 aa	Known RBP	1.82	□□□□□ -2.12
SSK2	YNR031C	HEF3	P53978	1044 aa	Known RBP	1.82	□□□□□ -2.12
SSK2	YNR031C	IOC2	Q12072	812 aa		1.82	□□□□□ -2.12
SSK2	YNR031C	ADR1	P07248	1323 aa		1.82	□□□□□ -2.12
SSK2	YNR031C	MRM1	P25270	412 aa		1.81	□□□□□ -2.12
SSK2	YNR031C	MIA40	P36046	403 aa		1.81	□□□□□ -2.12
SSK2	YNR031C	ATG32	P40458	529 aa		1.81	□□□□□ -2.12
SSK2	YNR031C	FAA4	P47912	694 aa	Known RBP	1.81	□□□□□ -2.12
SSK2	YNR031C	DMA2	P53924	522 aa		1.81	□□□□□ -2.12
SSK2	YNR031C	YDR344C	Q05510	147 aa		1.81	□□□□□ -2.12
SSK2	YNR031C	LEU2	P04173	364 aa	Predicted RBP	1.81	□□□□□ -2.12
SSK2	YNR031C	SAF1	P38352	637 aa		1.81	□□□□□ -2.12
SSK2	YNR031C	RPN1	P38764	993 aa	Known RBP	1.81	□□□□□ -2.12
SSK2	YNR031C	MXR1	P40029	184 aa		1.81	□□□□□ -2.12
SSK2	YNR031C	NET1	P47035	1189 aa		1.81	□□□□□ -2.12
SSK2	YNR031C	YJR107W	P47145	328 aa		1.81	□□□□□ -2.12
SSK2	YNR031C	HUL5	P53119	910 aa		1.81	□□□□□ -2.12
SSK2	YNR031C	SPP1	Q03012	353 aa		1.81	□□□□□ -2.12
SSK2	YNR031C	BDF2	Q07442	638 aa		1.81	□□□□□ -2.12
SSK2	YNR031C	LPD1	P09624	499 aa	Known RBP	1.81	□□□□□ -2.12
SSK2	YNR031C	MNN4	P36044	1178 aa		1.81	□□□□□ -2.12
SSK2	YNR031C	PIN2	Q12057	282 aa		1.81	□□□□□ -2.12
SSK2	YNR031C	NHA1	Q99271	985 aa		1.81	□□□□□ -2.12
SSK2	YNR031C	TY1B-A	O13527	1196 aa	Known RBP	1.8	□□□□□ -2.12
SSK2	YNR031C	SER1	P33330	395 aa	Known RBP	1.8	□□□□□ -2.12
SSK2	YNR031C	VPS29	P38759	282 aa		1.8	□□□□□ -2.12
SSK2	YNR031C	FUN12	P39730	1002 aa	Known RBP	1.8	□□□□□ -2.12
SSK2	YNR031C	YAP5	P40574	245 aa		1.8	□□□□□ -2.12
SSK2	YNR031C	YAF9	P53930	226 aa		1.8	□□□□□ -2.12
SSK2	YNR031C	EAP1	P36041	632 aa	Known RBP	1.8	□□□□□ -2.12
SSK2	YNR031C	YBR287W	P38355	427 aa		1.8	□□□□□ -2.12
SSK2	YNR031C	NUG1	P40010	520 aa	Known RBP	1.8	□□□□□ -2.12
SSK2	YNR031C	SBE2	P42223	864 aa	Known RBP	1.8	□□□□□ -2.12
SSK2	YNR031C	MCM16	Q12262	181 aa		1.8	□□□□□ -2.12
SSK2	YNR031C	CBP1	P07252	654 aa		1.8	□□□□□ -2.12
SSK2	YNR031C	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	1.8	□□□□□ -2.12	not detected
SSK2	YNR031C	EAF7	P53911	425 aa	Known RBP	1.8	□□□□□ -2.12
SSK2	YNR031C	FMP27	Q06179	2628 aa		1.8	□□□□□ -2.12
SSK2	YNR031C	IMG2	P25642	146 aa	Predicted RBP	1.79	□□□□□ -2.12
SSK2	YNR031C	STM1	P39015	273 aa	Known RBP	1.79	□□□□□ -2.12
SSK2	YNR031C	SEC9	P40357	651 aa		1.79	□□□□□ -2.12
SSK2	YNR031C	MET7	Q08645	548 aa		1.79	□□□□□ -2.12
SSK2	YNR031C	SUT2	Q12286	268 aa		1.79	□□□□□ -2.12
SSK2	YNR031C	RPL22A	P05749	121 aa	Known RBP	1.79	□□□□□ -2.12
SSK2	YNR031C	BIO2	P32451	375 aa		1.79	□□□□□ -2.12
SSK2	YNR031C	VPS4	P52917	437 aa		1.79	□□□□□ -2.12
SSK2	YNR031C	PIB2	P53191	635 aa		1.79	□□□□□ -2.12
SSK2	YNR031C	YNL050C	P53952	270 aa		1.79	□□□□□ -2.12
SSK2	YNR031C	CTI6	Q08923	506 aa		1.79	□□□□□ -2.12
SSK2	YNR031C	RRG1	Q12167	365 aa	Predicted RBP	1.79	□□□□□ -2.12
SSK2	YNR031C	CDC60	P26637	1090 aa	Known RBP	1.79	□□□□□ -2.12
SSK2	YNR031C	BBC1	P47068	1157 aa		1.79	□□□□□ -2.12
SSK2	YNR031C	FOL2	P51601	243 aa	Known RBP	1.79	□□□□□ -2.12
SSK2	YNR031C	DOS2	P54858	310 aa		1.79	□□□□□ -2.12
SSK2	YNR031C	PHM7	Q12252	991 aa		1.79	□□□□□ -2.12
SSK2	YNR031C	YKR018C	P36114	725 aa		1.79	□□□□□ -2.12
SSK2	YNR031C	RFT1	P38206	574 aa	Predicted RBP	1.79	□□□□□ -2.12
SSK2	YNR031C	SNF7	P39929	240 aa	Known RBP	1.79	□□□□□ -2.12
SSK2	YNR031C	PUS6	P53294	404 aa		1.79	□□□□□ -2.12
SSK2	YNR031C	BRE1	Q07457	700 aa	Known RBP	1.79	□□□□□ -2.12
SSK2	YNR031C	INP54	Q08227	384 aa	Known RBP	1.79	□□□□□ -2.12
SSK2	YNR031C	SVF1	Q05515	481 aa		1.78	□□□□□ -2.12
SSK2	YNR031C	STE4	P18851	423 aa		1.78	□□□□□ -2.12
SSK2	YNR031C	NMD3	P38861	518 aa	Known RBP	1.78	□□□□□ -2.12
SSK2	YNR031C	MAM1	P40065	302 aa		1.78	□□□□□ -2.12
SSK2	YNR031C	BUD27	P43573	796 aa	Known RBP RIP-Chip data	1.78	□□□□□ -2.12	not detected
SSK2	YNR031C	TAF8	Q03750	510 aa		1.78	□□□□□ -2.12
SSK2	YNR031C	HCR1	Q05775	265 aa	Known RBP	1.78	□□□□□ -2.12
SSK2	YNR031C	ETT1	Q08421	412 aa	Known RBP	1.78	□□□□□ -2.12
SSK2	YNR031C	TPD3	P31383	635 aa		1.78	□□□□□ -2.12
SSK2	YNR031C	CEF1	Q03654	590 aa	Predicted RBP	1.78	□□□□□ -2.12
SSK2	YNR031C	UBX2	Q04228	584 aa		1.78	□□□□□ -2.12
SSK2	YNR031C	SEC20	P28791	383 aa		1.78	□□□□□ -2.13
SSK2	YNR031C	FRD1	P32614	470 aa	Known RBP	1.78	□□□□□ -2.13
SSK2	YNR031C	TIF11	P38912	153 aa	Known RBP	1.78	□□□□□ -2.13
SSK2	YNR031C	ATG3	P40344	310 aa		1.78	□□□□□ -2.13
SSK2	YNR031C	LEM3	P42838	414 aa		1.78	□□□□□ -2.13
SSK2	YNR031C	YGL081W	P53156	320 aa		1.78	□□□□□ -2.13

Retrieved 100 of 5,963 RNA–protein pairs in 835.4 ms